RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 IGLC3P0DOY3 106 aa11.34□□□□□ -0.59
GABRD-216ENST00000640688 TPRXLQ17RH7 258 aa11.34□□□□□ -0.59
GABRD-216ENST00000640688 CDIP1Q9H305 208 aa11.34□□□□□ -0.59
GABRD-216ENST00000640688 LINC01549A6NIU2 74 aa11.33□□□□□ -0.6
GABRD-216ENST00000640688 ZNF22P17026 224 aaPredicted RBP11.33□□□□□ -0.6
GABRD-216ENST00000640688 FA2HQ7L5A8 372 aa11.33□□□□□ -0.6
GABRD-216ENST00000640688 ZNF625Q96I27 306 aaPredicted RBP11.33□□□□□ -0.6
GABRD-216ENST00000640688 ERG28Q9UKR5 140 aa11.33□□□□□ -0.6
GABRD-216ENST00000640688 A0A096LNJ9 63 aa11.32□□□□□ -0.6
GABRD-216ENST00000640688 PLEKHB2Q96CS7 222 aa11.32□□□□□ -0.6
GABRD-216ENST00000640688 NDUFA6P56556 154 aa11.31□□□□□ -0.6
GABRD-216ENST00000640688 TRGC2P03986 189 aa11.3□□□□□ -0.6
GABRD-216ENST00000640688 URB1-AS1Q96HZ7 61 aa11.29□□□□□ -0.6
GABRD-216ENST00000640688 RPL24P83731 157 aaKnown RBP11.27□□□□□ -0.61
GABRD-216ENST00000640688 HIGD2AQ9BW72 106 aa11.27□□□□□ -0.61
GABRD-216ENST00000640688 PPDPFQ9H3Y8 114 aa11.27□□□□□ -0.61
GABRD-216ENST00000640688 COX17Q14061 63 aa11.26□□□□□ -0.61
GABRD-216ENST00000640688 PMCHL1Q16048 86 aa11.26□□□□□ -0.61
GABRD-216ENST00000640688 C11orf86A6NJI1 115 aa11.25□□□□□ -0.61
GABRD-216ENST00000640688 SPRR4Q96PI1 79 aa11.23□□□□□ -0.61
GABRD-216ENST00000640688 CTAG1AP78358 180 aa11.22□□□□□ -0.61
GABRD-216ENST00000640688 BAGE3Q86Y29 109 aa11.22□□□□□ -0.61
GABRD-216ENST00000640688 A0A0U1RRA0 63 aa11.21□□□□□ -0.61
GABRD-216ENST00000640688 TMEM170BQ5T4T1 132 aa11.21□□□□□ -0.61
GABRD-216ENST00000640688 C18orf32Q8TCD1 76 aa11.21□□□□□ -0.61
GABRD-216ENST00000640688 HBDP02042 147 aa11.2□□□□□ -0.62
GABRD-216ENST00000640688 LINC00614P0C842 121 aa11.2□□□□□ -0.62
GABRD-216ENST00000640688 KRTAP9-6A0A140TA67 174 aa11.19□□□□□ -0.62
GABRD-216ENST00000640688 LINC00158P58513 81 aa11.19□□□□□ -0.62
GABRD-216ENST00000640688 DAND5Q8N907 189 aa11.19□□□□□ -0.62
GABRD-216ENST00000640688 SPAG11AQ6PDA7 123 aa11.17□□□□□ -0.62
GABRD-216ENST00000640688 HIST1H2BKO60814 126 aa11.16□□□□□ -0.62
GABRD-216ENST00000640688 S100A6P06703 90 aa11.16□□□□□ -0.62
GABRD-216ENST00000640688 HIST1H2BJP06899 126 aa11.16□□□□□ -0.62
GABRD-216ENST00000640688 HIST1H2BOP23527 126 aa11.16□□□□□ -0.62
GABRD-216ENST00000640688 HIST1H2BBP33778 126 aa11.16□□□□□ -0.62
GABRD-216ENST00000640688 HIST1H2BDP58876 126 aa11.16□□□□□ -0.62
GABRD-216ENST00000640688 HIST1H2BCP62807 126 aa11.16□□□□□ -0.62
GABRD-216ENST00000640688 HIST2H2BEQ16778 126 aa11.16□□□□□ -0.62
GABRD-216ENST00000640688 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.16□□□□□ -0.62
GABRD-216ENST00000640688 HIST1H2BHQ93079 126 aa11.16□□□□□ -0.62
GABRD-216ENST00000640688 HIST1H2BNQ99877 126 aa11.16□□□□□ -0.62
GABRD-216ENST00000640688 HIST1H2BMQ99879 126 aa11.16□□□□□ -0.62
GABRD-216ENST00000640688 Q8NBF4 154 aa11.15□□□□□ -0.62
GABRD-216ENST00000640688 KRTAP13-3Q3SY46 172 aa11.14□□□□□ -0.63
GABRD-216ENST00000640688 SFTA2Q6UW10 78 aa11.14□□□□□ -0.63
GABRD-216ENST00000640688 CHTOPQ9Y3Y2 248 aaKnown RBP11.14□□□□□ -0.63
GABRD-216ENST00000640688 TMEM223A0PJW6 202 aa11.13□□□□□ -0.63
GABRD-216ENST00000640688 NCR3O14931 201 aa11.13□□□□□ -0.63
GABRD-216ENST00000640688 HSBP1O75506 76 aa11.13□□□□□ -0.63
GABRD-216ENST00000640688 SMIM13P0DJ93 91 aa11.13□□□□□ -0.63
GABRD-216ENST00000640688 FP248Q71RG6 208 aaPredicted RBP11.13□□□□□ -0.63
GABRD-216ENST00000640688 KRTAP4-1Q9BYQ7 146 aa11.13□□□□□ -0.63
GABRD-216ENST00000640688 C4orf48Q5BLP8 95 aa11.12□□□□□ -0.63
GABRD-216ENST00000640688 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
GABRD-216ENST00000640688 CHCHD1Q96BP2 118 aaKnown RBP11.12□□□□□ -0.63
GABRD-216ENST00000640688 TMA7Q9Y2S6 64 aaKnown RBP11.12□□□□□ -0.63
GABRD-216ENST00000640688 KRTAP4-16G5E9R7 235 aaPredicted RBP11.11□□□□□ -0.63
GABRD-216ENST00000640688 PRYO14603 147 aa11.11□□□□□ -0.63
GABRD-216ENST00000640688 SPRR1AP35321 89 aa11.11□□□□□ -0.63
GABRD-216ENST00000640688 BOD1L2Q8IYS8 172 aa11.11□□□□□ -0.63
GABRD-216ENST00000640688 ZNF706Q9Y5V0 76 aaPredicted RBP11.11□□□□□ -0.63
GABRD-216ENST00000640688 SERF1AO75920 110 aa11.1□□□□□ -0.63
GABRD-216ENST00000640688 MIR7-3HGQ8N6C7 128 aa11.09□□□□□ -0.63
GABRD-216ENST00000640688 LINC00337Q8N6G1 96 aa11.09□□□□□ -0.63
GABRD-216ENST00000640688 KCNQ1DNQ9H478 68 aa11.09□□□□□ -0.63
GABRD-216ENST00000640688 ASB16-AS1Q495Z4 193 aa11.08□□□□□ -0.64
GABRD-216ENST00000640688 TRBV10-3A0A0K0K1G6 114 aa11.06□□□□□ -0.64
GABRD-216ENST00000640688 S100A2P29034 98 aa11.06□□□□□ -0.64
GABRD-216ENST00000640688 MEIG1Q5JSS6 88 aa11.06□□□□□ -0.64
GABRD-216ENST00000640688 ETDCA0A1B0GVM5 59 aa11.05□□□□□ -0.64
GABRD-216ENST00000640688 LINC00483Q53H64 154 aa11.05□□□□□ -0.64
GABRD-216ENST00000640688 TRAV12-1A0A0B4J245 112 aa11.04□□□□□ -0.64
GABRD-216ENST00000640688 ERC2-IT1O76042 136 aa11.04□□□□□ -0.64
GABRD-216ENST00000640688 SPINK1P00995 79 aa11.04□□□□□ -0.64
GABRD-216ENST00000640688 GAGE2AQ6NT46 116 aa11.04□□□□□ -0.64
GABRD-216ENST00000640688 FAM19A2Q8N3H0 131 aa11.04□□□□□ -0.64
GABRD-216ENST00000640688 IFI27L1Q96BM0 104 aa11.04□□□□□ -0.64
GABRD-216ENST00000640688 COA6Q5JTJ3 125 aaKnown RBP11.02□□□□□ -0.65
GABRD-216ENST00000640688 IGLV9-49A0A0B4J1Y8 123 aa11.01□□□□□ -0.65
GABRD-216ENST00000640688 B5MCH6 92 aa11.01□□□□□ -0.65
GABRD-216ENST00000640688 FABP4P15090 132 aa11.01□□□□□ -0.65
GABRD-216ENST00000640688 SNRPEP62304 92 aaKnown RBP11.01□□□□□ -0.65
GABRD-216ENST00000640688 MOBPQ13875 183 aa11.01□□□□□ -0.65
GABRD-216ENST00000640688 LEPROTL1O95214 131 aa11□□□□□ -0.65
GABRD-216ENST00000640688 Q8N377 158 aa11□□□□□ -0.65
GABRD-216ENST00000640688 NDUFA12Q9UI09 145 aa11□□□□□ -0.65
GABRD-216ENST00000640688 HSPB8Q9UJY1 196 aa11□□□□□ -0.65
GABRD-216ENST00000640688 TSPEAR-AS2P59090 65 aa10.99□□□□□ -0.65
GABRD-216ENST00000640688 HERV-K104P63124 156 aa10.99□□□□□ -0.65
GABRD-216ENST00000640688 Q9BRP9 147 aa10.99□□□□□ -0.65
GABRD-216ENST00000640688 LINC00310P59036 64 aa10.98□□□□□ -0.65
GABRD-216ENST00000640688 LINC01547P58512 204 aaPredicted RBP10.97□□□□□ -0.65
GABRD-216ENST00000640688 SEC61BP60468 96 aaKnown RBP10.96□□□□□ -0.65
GABRD-216ENST00000640688 HIST3H2BBQ8N257 126 aa10.95□□□□□ -0.66
GABRD-216ENST00000640688 MAP1LC3CQ9BXW4 147 aa10.95□□□□□ -0.66
GABRD-216ENST00000640688 MYMXA0A1B0GTQ4 84 aa10.94□□□□□ -0.66
GABRD-216ENST00000640688 C5orf52A6NGY3 159 aa10.94□□□□□ -0.66
GABRD-216ENST00000640688 H0Y8G0 127 aa10.94□□□□□ -0.66
GABRD-216ENST00000640688 DDTP30046 118 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms