RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 KRTAP10-4P60372 401 aaPredicted RBP8.23□□□□□ -1.09
GTF3A-209ENST00000640289 RPL37AP61513 92 aaKnown RBP8.23□□□□□ -1.09
GTF3A-209ENST00000640289 DAND5Q8N907 189 aa8.23□□□□□ -1.09
GTF3A-209ENST00000640289 LINC00587B1AMM8 73 aa8.22□□□□□ -1.09
GTF3A-209ENST00000640289 PLA2G1BP04054 148 aaKnown RBP8.22□□□□□ -1.09
GTF3A-209ENST00000640289 KRTAP11-1Q8IUC1 163 aa8.22□□□□□ -1.09
GTF3A-209ENST00000640289 Q8NDZ9 215 aa8.22□□□□□ -1.09
GTF3A-209ENST00000640289 C22orf24Q9Y442 160 aa8.22□□□□□ -1.09
GTF3A-209ENST00000640289 ABCA13Q86UQ4 5058 aa8.21□□□□□ -1.09
GTF3A-209ENST00000640289 PCP2Q8IVA1 136 aa8.21□□□□□ -1.1
GTF3A-209ENST00000640289 PLA2G2DQ9UNK4 145 aa8.21□□□□□ -1.1
GTF3A-209ENST00000640289 VPS13BQ7Z7G8 4022 aa8.2□□□□□ -1.1
GTF3A-209ENST00000640289 HSBP1L1C9JCN9 74 aa8.2□□□□□ -1.1
GTF3A-209ENST00000640289 ADAMTSL4-AS1Q5T5F5 129 aa8.2□□□□□ -1.1
GTF3A-209ENST00000640289 VPREB1P12018 145 aa8.19□□□□□ -1.1
GTF3A-209ENST00000640289 UBE2BP63146 152 aa8.19□□□□□ -1.1
GTF3A-209ENST00000640289 JOSD1Q15040 202 aaPredicted RBP8.19□□□□□ -1.1
GTF3A-209ENST00000640289 LITAFQ99732 161 aa8.19□□□□□ -1.1
GTF3A-209ENST00000640289 IGLV5-37A0A075B6J1 123 aa8.18□□□□□ -1.1
GTF3A-209ENST00000640289 GAGE10A6NGK3 116 aa8.18□□□□□ -1.1
GTF3A-209ENST00000640289 NPC2P61916 151 aa8.18□□□□□ -1.1
GTF3A-209ENST00000640289 PRR3P79522 188 aaKnown RBP8.18□□□□□ -1.1
GTF3A-209ENST00000640289 MRPL55Q7Z7F7 128 aaKnown RBP8.18□□□□□ -1.1
GTF3A-209ENST00000640289 NKAPP1Q8N9T2 125 aa8.18□□□□□ -1.1
GTF3A-209ENST00000640289 TP73-AS1Q9UF72 201 aa8.18□□□□□ -1.1
GTF3A-209ENST00000640289 HNRNPA3P51991 378 aaKnown RBP8.17□□□□□ -1.1
GTF3A-209ENST00000640289 BOD1L2Q8IYS8 172 aa8.17□□□□□ -1.1
GTF3A-209ENST00000640289 LINC00167Q96N53 147 aa8.17□□□□□ -1.1
GTF3A-209ENST00000640289 PSORS1C2Q9UIG4 136 aa8.17□□□□□ -1.1
GTF3A-209ENST00000640289 RPL37AP8A6NKH3 93 aa8.16□□□□□ -1.1
GTF3A-209ENST00000640289 EIF4EBP3O60516 100 aaPredicted RBP8.16□□□□□ -1.1
GTF3A-209ENST00000640289 RPL24P83731 157 aaKnown RBP8.16□□□□□ -1.1
GTF3A-209ENST00000640289 LBHQ53QV2 105 aaPredicted RBP8.16□□□□□ -1.1
GTF3A-209ENST00000640289 SOSTDC1Q6X4U4 206 aa8.16□□□□□ -1.1
GTF3A-209ENST00000640289 SCGB1D4Q6XE38 83 aa8.16□□□□□ -1.1
GTF3A-209ENST00000640289 LOC107984156A0A0G2JMH3 177 aa8.15□□□□□ -1.1
GTF3A-209ENST00000640289 TIMM17BO60830 172 aa8.15□□□□□ -1.1
GTF3A-209ENST00000640289 PYY3Q5JQD4 70 aa8.15□□□□□ -1.1
GTF3A-209ENST00000640289 ARL17AQ8IVW1 177 aa8.15□□□□□ -1.1
GTF3A-209ENST00000640289 NCR3O14931 201 aa8.14□□□□□ -1.11
GTF3A-209ENST00000640289 INAFM2P0DMQ5 153 aa8.14□□□□□ -1.11
GTF3A-209ENST00000640289 C1orf137Q5JT78 98 aa8.14□□□□□ -1.11
GTF3A-209ENST00000640289 PAM16Q9Y3D7 125 aa8.14□□□□□ -1.11
GTF3A-209ENST00000640289 IGKV2-28A0A075B6P5 120 aa8.13□□□□□ -1.11
GTF3A-209ENST00000640289 IGKV2D-28P01615 120 aa8.13□□□□□ -1.11
GTF3A-209ENST00000640289 LINC00308Q8TCZ7 52 aa8.13□□□□□ -1.11
GTF3A-209ENST00000640289 MIEN1Q9BRT3 115 aa8.13□□□□□ -1.11
GTF3A-209ENST00000640289 TMEM238C9JI98 176 aa8.12□□□□□ -1.11
GTF3A-209ENST00000640289 SPATA45Q537H7 98 aa8.12□□□□□ -1.11
GTF3A-209ENST00000640289 VAMP8Q9BV40 100 aa8.12□□□□□ -1.11
GTF3A-209ENST00000640289 PCLOQ9Y6V0 5065 aa8.12□□□□□ -1.11
GTF3A-209ENST00000640289 IGLV1-50A0A075B6I6 118 aa8.11□□□□□ -1.11
GTF3A-209ENST00000640289 M0R378 163 aa8.11□□□□□ -1.11
GTF3A-209ENST00000640289 COX8AP10176 69 aa8.1□□□□□ -1.11
GTF3A-209ENST00000640289 C14orf144Q96I85 54 aa8.1□□□□□ -1.11
GTF3A-209ENST00000640289 SPANXDQ9BXN6 97 aa8.1□□□□□ -1.11
GTF3A-209ENST00000640289 SPANXCQ9NY87 97 aa8.1□□□□□ -1.11
GTF3A-209ENST00000640289 NDUFC2O95298 119 aa8.09□□□□□ -1.11
GTF3A-209ENST00000640289 IGLV7-43P04211 117 aa8.09□□□□□ -1.11
GTF3A-209ENST00000640289 PKHD1L1Q86WI1 4243 aa8.08□□□□□ -1.12
GTF3A-209ENST00000640289 SPANXB1Q9NS25 103 aaPredicted RBP8.08□□□□□ -1.12
GTF3A-209ENST00000640289 TRBV10-3A0A0K0K1G6 114 aa8.07□□□□□ -1.12
GTF3A-209ENST00000640289 SRSF9Q13242 221 aaKnown RBP eCLIP8.07□□□□□ -1.12
GTF3A-209ENST00000640289 MUSTN1Q8IVN3 82 aa8.07□□□□□ -1.12
GTF3A-209ENST00000640289 TRBV10-2A0A0K0K1G8 114 aa8.06□□□□□ -1.12
GTF3A-209ENST00000640289 DLEU1O43261 78 aa8.06□□□□□ -1.12
GTF3A-209ENST00000640289 TMEM126AQ9H061 195 aa8.06□□□□□ -1.12
GTF3A-209ENST00000640289 BCE1O60756 84 aa8.05□□□□□ -1.12
GTF3A-209ENST00000640289 IFITM1P13164 125 aa8.05□□□□□ -1.12
GTF3A-209ENST00000640289 REG3GQ6UW15 175 aa8.05□□□□□ -1.12
GTF3A-209ENST00000640289 SPINK6Q6UWN8 80 aa8.05□□□□□ -1.12
GTF3A-209ENST00000640289 Q6ZVH6 145 aa8.05□□□□□ -1.12
GTF3A-209ENST00000640289 SRRM2Q9UQ35 2752 aaKnown RBP8.04□□□□□ -1.12
GTF3A-209ENST00000640289 DDTP30046 118 aa8.04□□□□□ -1.12
GTF3A-209ENST00000640289 SLC25A34Q6PIV7 304 aa8.04□□□□□ -1.12
GTF3A-209ENST00000640289 S100A7L2Q5SY68 101 aa8.03□□□□□ -1.12
GTF3A-209ENST00000640289 FAM19A1Q7Z5A9 133 aa8.03□□□□□ -1.12
GTF3A-209ENST00000640289 KCNQ1DNQ9H478 68 aa8.03□□□□□ -1.12
GTF3A-209ENST00000640289 PRYO14603 147 aa8.02□□□□□ -1.13
GTF3A-209ENST00000640289 ZNF861PO60384 105 aa8.02□□□□□ -1.13
GTF3A-209ENST00000640289 IGLV6-57P01721 117 aa8.02□□□□□ -1.13
GTF3A-209ENST00000640289 C2orf91Q6ZV80 131 aa8.02□□□□□ -1.13
GTF3A-209ENST00000640289 LINC00337Q8N6G1 96 aa8.02□□□□□ -1.13
GTF3A-209ENST00000640289 COPS9Q8WXC6 57 aa8.02□□□□□ -1.13
GTF3A-209ENST00000640289 PPDPFQ9H3Y8 114 aa8.02□□□□□ -1.13
GTF3A-209ENST00000640289 LOC105371267A0A1B0GV96 52 aa8.01□□□□□ -1.13
GTF3A-209ENST00000640289 UBE2AP49459 152 aa8.01□□□□□ -1.13
GTF3A-209ENST00000640289 PRLHP81277 87 aa8.01□□□□□ -1.13
GTF3A-209ENST00000640289 OR13C6PQ8NH95 151 aa8.01□□□□□ -1.13
GTF3A-209ENST00000640289 HIST1H4GQ99525 98 aa8.01□□□□□ -1.13
GTF3A-209ENST00000640289 KRTAP3-3Q9BYR6 98 aa8.01□□□□□ -1.13
GTF3A-209ENST00000640289 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
GTF3A-209ENST00000640289 SPRR1AP35321 89 aa8□□□□□ -1.13
GTF3A-209ENST00000640289 S100A12P80511 92 aa8□□□□□ -1.13
GTF3A-209ENST00000640289 KRTAP13-1Q8IUC0 172 aa8□□□□□ -1.13
GTF3A-209ENST00000640289 LINC00518Q8N0U6 118 aa8□□□□□ -1.13
GTF3A-209ENST00000640289 HIGD1BQ9P298 99 aa8□□□□□ -1.13
GTF3A-209ENST00000640289 H0Y9J4 135 aa7.99□□□□□ -1.13
GTF3A-209ENST00000640289 RPL28P46779 137 aaKnown RBP7.99□□□□□ -1.13
GTF3A-209ENST00000640289 DIRC1Q969H9 104 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms