RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SPAG11BQ08648 103 aa7.41□□□□□ -1.22
SNIP1-204ENST00000638725 Q6ZQT0 140 aa7.41□□□□□ -1.22
SNIP1-204ENST00000638725 RBM3P98179 157 aaKnown RBP7.4□□□□□ -1.22
SNIP1-204ENST00000638725 DEFB135Q30KP9 77 aa7.4□□□□□ -1.22
SNIP1-204ENST00000638725 LAMTOR3Q9UHA4 124 aa7.4□□□□□ -1.22
SNIP1-204ENST00000638725 LYRM9A8MSI8 78 aa7.4□□□□□ -1.23
SNIP1-204ENST00000638725 ZNF561-AS1K7EIQ3 104 aa7.39□□□□□ -1.23
SNIP1-204ENST00000638725 OXTP01178 125 aa7.39□□□□□ -1.23
SNIP1-204ENST00000638725 CYSRT1A8MQ03 144 aa7.38□□□□□ -1.23
SNIP1-204ENST00000638725 TRBV10-3A0A0K0K1G6 114 aa7.38□□□□□ -1.23
SNIP1-204ENST00000638725 Q6ZQY7 126 aa7.38□□□□□ -1.23
SNIP1-204ENST00000638725 DAD1P61803 113 aa7.37□□□□□ -1.23
SNIP1-204ENST00000638725 CELA1Q9UNI1 258 aa7.37□□□□□ -1.23
SNIP1-204ENST00000638725 LOC110117498A0A087WWA1 95 aa7.37□□□□□ -1.23
SNIP1-204ENST00000638725 IGLV6-57P01721 117 aa7.37□□□□□ -1.23
SNIP1-204ENST00000638725 C20orf197Q8N268 126 aa7.37□□□□□ -1.23
SNIP1-204ENST00000638725 HTN3P15516 51 aa7.36□□□□□ -1.23
SNIP1-204ENST00000638725 A0A0J9YWU9 116 aa7.36□□□□□ -1.23
SNIP1-204ENST00000638725 IGHV4-30-4P0DP06 118 aa7.36□□□□□ -1.23
SNIP1-204ENST00000638725 HAMPP81172 84 aa7.36□□□□□ -1.23
SNIP1-204ENST00000638725 KLK12Q9UKR0 248 aa7.36□□□□□ -1.23
SNIP1-204ENST00000638725 LINC01547P58512 204 aaPredicted RBP7.35□□□□□ -1.23
SNIP1-204ENST00000638725 Q6ZVQ6 151 aa7.35□□□□□ -1.23
SNIP1-204ENST00000638725 XAGE1AQ9HD64 81 aa7.35□□□□□ -1.23
SNIP1-204ENST00000638725 MUC7Q8TAX7 377 aa7.33□□□□□ -1.24
SNIP1-204ENST00000638725 C6orf48Q9UBA6 75 aa7.33□□□□□ -1.24
SNIP1-204ENST00000638725 LELP1Q5T871 98 aa7.33□□□□□ -1.24
SNIP1-204ENST00000638725 DIRC1Q969H9 104 aa7.32□□□□□ -1.24
SNIP1-204ENST00000638725 SMR3AQ99954 134 aa7.32□□□□□ -1.24
SNIP1-204ENST00000638725 PRR34Q9NV39 138 aa7.32□□□□□ -1.24
SNIP1-204ENST00000638725 Q8NAQ8 132 aa7.32□□□□□ -1.24
SNIP1-204ENST00000638725 PDZD2O15018 2839 aa7.32□□□□□ -1.24
SNIP1-204ENST00000638725 TRAV10A0A0B4J240 114 aa7.31□□□□□ -1.24
SNIP1-204ENST00000638725 C9orf66Q5T8R8 295 aa7.31□□□□□ -1.24
SNIP1-204ENST00000638725 NDUFC2-KCTD14E9PQ53 114 aa7.31□□□□□ -1.24
SNIP1-204ENST00000638725 TRAV7A0A075B6U4 112 aa7.3□□□□□ -1.24
SNIP1-204ENST00000638725 GVQW2A0A096LPI5 108 aaPredicted RBP7.3□□□□□ -1.24
SNIP1-204ENST00000638725 ZNF73O43830 326 aaPredicted RBP7.3□□□□□ -1.24
SNIP1-204ENST00000638725 APOC4P55056 127 aa7.3□□□□□ -1.24
SNIP1-204ENST00000638725 SCXQ7RTU7 201 aa7.3□□□□□ -1.24
SNIP1-204ENST00000638725 VWFP04275 2813 aa7.29□□□□□ -1.24
SNIP1-204ENST00000638725 PDE6GP18545 87 aa7.29□□□□□ -1.24
SNIP1-204ENST00000638725 COX7BP24311 80 aa7.29□□□□□ -1.24
SNIP1-204ENST00000638725 HIGD2BQ4VC39 106 aa7.29□□□□□ -1.24
SNIP1-204ENST00000638725 HIVEP2P31629 2446 aa7.28□□□□□ -1.24
SNIP1-204ENST00000638725 TRBV7-4A0A0J9YYF1 115 aa7.28□□□□□ -1.24
SNIP1-204ENST00000638725 FAM236DA0A1B0GTK5 79 aa7.28□□□□□ -1.24
SNIP1-204ENST00000638725 SPART-AS1P0CW21 52 aa7.28□□□□□ -1.24
SNIP1-204ENST00000638725 FAM236CP0DP71 79 aa7.28□□□□□ -1.24
SNIP1-204ENST00000638725 C4orf26Q17RF5 130 aa7.28□□□□□ -1.24
SNIP1-204ENST00000638725 Q5XG85 94 aa7.28□□□□□ -1.24
SNIP1-204ENST00000638725 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.28□□□□□ -1.24
SNIP1-204ENST00000638725 H7BZZ5 65 aa7.28□□□□□ -1.24
SNIP1-204ENST00000638725 WIPF1O43516 503 aa7.28□□□□□ -1.24
SNIP1-204ENST00000638725 BCE1O60756 84 aa7.28□□□□□ -1.24
SNIP1-204ENST00000638725 MIFP14174 115 aa7.28□□□□□ -1.24
SNIP1-204ENST00000638725 ELOF1P60002 83 aaKnown RBP7.28□□□□□ -1.24
SNIP1-204ENST00000638725 CXCL6P80162 114 aa7.28□□□□□ -1.24
SNIP1-204ENST00000638725 SNURFQ9Y675 71 aa7.27□□□□□ -1.25
SNIP1-204ENST00000638725 H3BQ85 93 aa7.27□□□□□ -1.25
SNIP1-204ENST00000638725 VPREB1P12018 145 aa7.26□□□□□ -1.25
SNIP1-204ENST00000638725 RMI2Q96E14 147 aa7.26□□□□□ -1.25
SNIP1-204ENST00000638725 CAMK2N2Q96S95 79 aa7.25□□□□□ -1.25
SNIP1-204ENST00000638725 HRCT1Q6UXD1 115 aa7.25□□□□□ -1.25
SNIP1-204ENST00000638725 TENM4Q6N022 2769 aa7.25□□□□□ -1.25
SNIP1-204ENST00000638725 KLKP1Q107X0 134 aa7.25□□□□□ -1.25
SNIP1-204ENST00000638725 WFDC10BQ8IUB3 73 aa7.25□□□□□ -1.25
SNIP1-204ENST00000638725 Q6ZRU5 148 aa7.24□□□□□ -1.25
SNIP1-204ENST00000638725 TM2D3Q9BRN9 247 aa7.24□□□□□ -1.25
SNIP1-204ENST00000638725 ITPR2Q14571 2701 aa7.24□□□□□ -1.25
SNIP1-204ENST00000638725 TRBV7-6A0A0J9YX20 115 aa7.24□□□□□ -1.25
SNIP1-204ENST00000638725 M0R378 163 aa7.22□□□□□ -1.25
SNIP1-204ENST00000638725 F8WEM9 126 aa7.22□□□□□ -1.25
SNIP1-204ENST00000638725 LINC00528Q8N1L1 170 aa7.22□□□□□ -1.25
SNIP1-204ENST00000638725 EGFEM1PQ0D2K5 195 aa7.21□□□□□ -1.25
SNIP1-204ENST00000638725 KRTAP26-1Q6PEX3 210 aa7.21□□□□□ -1.25
SNIP1-204ENST00000638725 C15orf56Q8N910 161 aa7.21□□□□□ -1.26
SNIP1-204ENST00000638725 Q8N9L7 120 aa7.21□□□□□ -1.26
SNIP1-204ENST00000638725 SERP1Q9Y6X1 66 aa7.21□□□□□ -1.26
SNIP1-204ENST00000638725 EPM2AB3EWF7 344 aa7.2□□□□□ -1.26
SNIP1-204ENST00000638725 NREPQ16612 68 aa7.19□□□□□ -1.26
SNIP1-204ENST00000638725 KPRPQ5T749 579 aaPredicted RBP7.19□□□□□ -1.26
SNIP1-204ENST00000638725 Q6ZRP5 223 aa7.19□□□□□ -1.26
SNIP1-204ENST00000638725 BPY2O14599 106 aa7.18□□□□□ -1.26
SNIP1-204ENST00000638725 RETNQ9HD89 108 aa7.17□□□□□ -1.26
SNIP1-204ENST00000638725 HIVEP1P15822 2718 aa7.17□□□□□ -1.26
SNIP1-204ENST00000638725 FASNP49327 2511 aaKnown RBP7.16□□□□□ -1.26
SNIP1-204ENST00000638725 INAFM1C9JVW0 142 aa7.16□□□□□ -1.26
SNIP1-204ENST00000638725 C3orf84H3BNL1 204 aa7.16□□□□□ -1.26
SNIP1-204ENST00000638725 IGKV4-1P06312 121 aa7.16□□□□□ -1.26
SNIP1-204ENST00000638725 TENM1Q9UKZ4 2725 aa7.16□□□□□ -1.26
SNIP1-204ENST00000638725 DEFB105AQ8NG35 78 aa7.15□□□□□ -1.26
SNIP1-204ENST00000638725 NOTCH2Q04721 2471 aa7.15□□□□□ -1.26
SNIP1-204ENST00000638725 Q6ZTC4 211 aa7.15□□□□□ -1.26
SNIP1-204ENST00000638725 TMEM254Q8TBM7 123 aa7.15□□□□□ -1.26
SNIP1-204ENST00000638725 C1orf43Q9BWL3 253 aa7.14□□□□□ -1.27
SNIP1-204ENST00000638725 UNC79Q9P2D8 2635 aa7.14□□□□□ -1.27
SNIP1-204ENST00000638725 IGKV2D-24A0A075B6R9 120 aa7.14□□□□□ -1.27
SNIP1-204ENST00000638725 ESRGQ1W209 222 aa7.14□□□□□ -1.27
SNIP1-204ENST00000638725 MRAPQ8TCY5 172 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms