RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 LINC01556Q5JQF7 62 aa14.37□□□□□ -0.11
CLN6-224ENST00000638076 NOTCH1P46531 2555 aa14.37□□□□□ -0.11
CLN6-224ENST00000638076 C15orf53Q8NAA6 179 aa14.37□□□□□ -0.11
CLN6-224ENST00000638076 S100A7L2Q5SY68 101 aa14.36□□□□□ -0.11
CLN6-224ENST00000638076 SNCGO76070 127 aa14.35□□□□□ -0.11
CLN6-224ENST00000638076 SLPIP03973 132 aa14.35□□□□□ -0.11
CLN6-224ENST00000638076 MRAPQ8TCY5 172 aa14.35□□□□□ -0.11
CLN6-224ENST00000638076 CAMK2N2Q96S95 79 aa14.34□□□□□ -0.11
CLN6-224ENST00000638076 C1orf43Q9BWL3 253 aa14.34□□□□□ -0.11
CLN6-224ENST00000638076 TM2D3Q9BRN9 247 aa14.33□□□□□ -0.11
CLN6-224ENST00000638076 K7EIL1 84 aa14.33□□□□□ -0.12
CLN6-224ENST00000638076 C15orf56Q8N910 161 aa14.33□□□□□ -0.12
CLN6-224ENST00000638076 TRAV10A0A0B4J240 114 aa14.32□□□□□ -0.12
CLN6-224ENST00000638076 INAFM2P0DMQ5 153 aa14.32□□□□□ -0.12
CLN6-224ENST00000638076 C6orf99Q4VX62 202 aa14.32□□□□□ -0.12
CLN6-224ENST00000638076 XAGE1AQ9HD64 81 aa14.32□□□□□ -0.12
CLN6-224ENST00000638076 IGKV2D-24A0A075B6R9 120 aa14.31□□□□□ -0.12
CLN6-224ENST00000638076 RPL18AQ02543 176 aaKnown RBP14.31□□□□□ -0.12
CLN6-224ENST00000638076 C9orf129Q5T035 196 aaKnown RBP14.31□□□□□ -0.12
CLN6-224ENST00000638076 TTC32Q5I0X7 151 aa14.3□□□□□ -0.12
CLN6-224ENST00000638076 ORMDL1Q9P0S3 153 aa14.3□□□□□ -0.12
CLN6-224ENST00000638076 ACYP1P07311 99 aa14.3□□□□□ -0.12
CLN6-224ENST00000638076 Q8N814 137 aa14.3□□□□□ -0.12
CLN6-224ENST00000638076 A0A1B0GX51 115 aa14.29□□□□□ -0.12
CLN6-224ENST00000638076 Q6ZRU5 148 aa14.29□□□□□ -0.12
CLN6-224ENST00000638076 DNAH10OSP0CZ25 163 aa14.28□□□□□ -0.12
CLN6-224ENST00000638076 LINC00167Q96N53 147 aa14.27□□□□□ -0.12
CLN6-224ENST00000638076 IGLV6-57P01721 117 aa14.27□□□□□ -0.13
CLN6-224ENST00000638076 HUWE1Q7Z6Z7 4374 aaKnown RBP14.26□□□□□ -0.13
CLN6-224ENST00000638076 C2orf48Q96LS8 159 aa14.26□□□□□ -0.13
CLN6-224ENST00000638076 NBEAL1Q6ZS30 2694 aa14.26□□□□□ -0.13
CLN6-224ENST00000638076 GAGE2BQ13066 116 aa14.26□□□□□ -0.13
CLN6-224ENST00000638076 GAGE2EQ4V326 116 aa14.26□□□□□ -0.13
CLN6-224ENST00000638076 GAGE2DQ9UEU5 116 aa14.26□□□□□ -0.13
CLN6-224ENST00000638076 OBSCN-AS1Q96MR7 158 aa14.25□□□□□ -0.13
CLN6-224ENST00000638076 C14orf132Q9NPU4 83 aa14.25□□□□□ -0.13
CLN6-224ENST00000638076 LINC00588Q9Y4M8 146 aa14.25□□□□□ -0.13
CLN6-224ENST00000638076 GAGE2AQ6NT46 116 aa14.24□□□□□ -0.13
CLN6-224ENST00000638076 ANAPC13Q9BS18 74 aa14.24□□□□□ -0.13
CLN6-224ENST00000638076 LINC00575Q6W349 94 aa14.22□□□□□ -0.13
CLN6-224ENST00000638076 TRBV10-3A0A0K0K1G6 114 aa14.21□□□□□ -0.13
CLN6-224ENST00000638076 NDUFC2-KCTD14E9PQ53 114 aa14.21□□□□□ -0.13
CLN6-224ENST00000638076 SMCR5Q8TEV8 140 aa14.21□□□□□ -0.13
CLN6-224ENST00000638076 Q6Q795 121 aa14.19□□□□□ -0.14
CLN6-224ENST00000638076 VPREB1P12018 145 aa14.19□□□□□ -0.14
CLN6-224ENST00000638076 TRAV23DV6A0A075B6W5 121 aa14.18□□□□□ -0.14
CLN6-224ENST00000638076 TMEM256-PLSCR3K7ERE1 68 aa14.18□□□□□ -0.14
CLN6-224ENST00000638076 F8WDY8 70 aa14.17□□□□□ -0.14
CLN6-224ENST00000638076 SYCNQ0VAF6 134 aa14.17□□□□□ -0.14
CLN6-224ENST00000638076 hADV29S1A0JD25 119 aa14.16□□□□□ -0.14
CLN6-224ENST00000638076 SDIM1Q6ZPB5 146 aa14.16□□□□□ -0.14
CLN6-224ENST00000638076 Q6ZRP5 223 aa14.16□□□□□ -0.14
CLN6-224ENST00000638076 DIRC1Q969H9 104 aa14.14□□□□□ -0.15
CLN6-224ENST00000638076 LINC00643Q86TS7 51 aa14.13□□□□□ -0.15
CLN6-224ENST00000638076 NHLRC4P0CG21 123 aaPredicted RBP14.13□□□□□ -0.15
CLN6-224ENST00000638076 TRBV7-7A0A0K0K1E9 115 aa14.12□□□□□ -0.15
CLN6-224ENST00000638076 M0R378 163 aa14.12□□□□□ -0.15
CLN6-224ENST00000638076 ZNF73O43830 326 aaPredicted RBP14.12□□□□□ -0.15
CLN6-224ENST00000638076 JMJD7-PLA2G4BH0Y9G9 81 aa14.12□□□□□ -0.15
CLN6-224ENST00000638076 SS18L2Q9UHA2 77 aa14.12□□□□□ -0.15
CLN6-224ENST00000638076 MGAM2Q2M2H8 2515 aa14.11□□□□□ -0.15
CLN6-224ENST00000638076 CASC10Q5T4H9 136 aa14.1□□□□□ -0.15
CLN6-224ENST00000638076 NDUFV3P56181 108 aaKnown RBP14.1□□□□□ -0.15
CLN6-224ENST00000638076 DNAH1Q9P2D7 4330 aa14.09□□□□□ -0.15
CLN6-224ENST00000638076 USP17L23D6RBM5 183 aa14.08□□□□□ -0.16
CLN6-224ENST00000638076 UPK3BQ9BT76 320 aa14.08□□□□□ -0.16
CLN6-224ENST00000638076 B5MCH6 92 aa14.07□□□□□ -0.16
CLN6-224ENST00000638076 Q6ZQY7 126 aa14.07□□□□□ -0.16
CLN6-224ENST00000638076 COX7BP24311 80 aa14.07□□□□□ -0.16
CLN6-224ENST00000638076 CCKP06307 115 aa14.06□□□□□ -0.16
CLN6-224ENST00000638076 ELOF1P60002 83 aaKnown RBP14.06□□□□□ -0.16
CLN6-224ENST00000638076 RMI2Q96E14 147 aa14.06□□□□□ -0.16
CLN6-224ENST00000638076 MDFIQ99750 246 aa14.06□□□□□ -0.16
CLN6-224ENST00000638076 LINC00846Q9NV44 126 aa14.06□□□□□ -0.16
CLN6-224ENST00000638076 IMUPQ9GZP8 106 aa14.04□□□□□ -0.16
CLN6-224ENST00000638076 TRBV7-6A0A0J9YX20 115 aa14.04□□□□□ -0.16
CLN6-224ENST00000638076 TLX1NBP0CAT3 122 aa14.02□□□□□ -0.16
CLN6-224ENST00000638076 LAMTOR3Q9UHA4 124 aa14.02□□□□□ -0.17
CLN6-224ENST00000638076 SERTAD4-AS1Q5TG53 156 aa14.01□□□□□ -0.17
CLN6-224ENST00000638076 NKAPP1Q8N9T2 125 aa14□□□□□ -0.17
CLN6-224ENST00000638076 COL7A1Q02388 2944 aa14□□□□□ -0.17
CLN6-224ENST00000638076 DNAH9Q9NYC9 4486 aa13.99□□□□□ -0.17
CLN6-224ENST00000638076 RBM3P98179 157 aaKnown RBP13.99□□□□□ -0.17
CLN6-224ENST00000638076 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.99□□□□□ -0.17
CLN6-224ENST00000638076 CCDC179H3BU77 68 aa13.98□□□□□ -0.17
CLN6-224ENST00000638076 H3BQ85 93 aa13.97□□□□□ -0.17
CLN6-224ENST00000638076 LINC00528Q8N1L1 170 aa13.97□□□□□ -0.17
CLN6-224ENST00000638076 C7orf33Q8WU49 177 aa13.96□□□□□ -0.18
CLN6-224ENST00000638076 LYSTQ99698 3801 aa13.95□□□□□ -0.18
CLN6-224ENST00000638076 FAM236AA0A1B0GUQ0 79 aa13.95□□□□□ -0.18
CLN6-224ENST00000638076 FAM236BA0A1B0GV22 79 aa13.95□□□□□ -0.18
CLN6-224ENST00000638076 KCNQ1DNQ9H478 68 aa13.94□□□□□ -0.18
CLN6-224ENST00000638076 PLA2G2DQ9UNK4 145 aa13.94□□□□□ -0.18
CLN6-224ENST00000638076 Q6ZQT0 140 aa13.93□□□□□ -0.18
CLN6-224ENST00000638076 KRTAP1-5Q9BYS1 174 aa13.93□□□□□ -0.18
CLN6-224ENST00000638076 IGKV3D-7A0A0C4DH55 119 aa13.93□□□□□ -0.18
CLN6-224ENST00000638076 FAM168BA1KXE4 195 aa13.93□□□□□ -0.18
CLN6-224ENST00000638076 Q6JHZ5 121 aa13.93□□□□□ -0.18
CLN6-224ENST00000638076 B9D2Q9BPU9 175 aa13.92□□□□□ -0.18
CLN6-224ENST00000638076 STAB2Q8WWQ8 2551 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms