RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ZNF575Q86XF7 245 aa11.82□□□□□ -0.52
CACNA1A-253ENST00000637927 FAM168BA1KXE4 195 aa11.81□□□□□ -0.52
CACNA1A-253ENST00000637927 DSCR10P59022 87 aa11.79□□□□□ -0.52
CACNA1A-253ENST00000637927 MUC7Q8TAX7 377 aa11.79□□□□□ -0.52
CACNA1A-253ENST00000637927 C2CD3Q4AC94 2353 aa11.78□□□□□ -0.52
CACNA1A-253ENST00000637927 EPM2AB3EWF7 344 aa11.77□□□□□ -0.53
CACNA1A-253ENST00000637927 OBSCN-AS1Q96MR7 158 aa11.75□□□□□ -0.53
CACNA1A-253ENST00000637927 COL27A1Q8IZC6 1860 aaPredicted RBP11.74□□□□□ -0.53
CACNA1A-253ENST00000637927 ANAPC11Q9NYG5 84 aa11.74□□□□□ -0.53
CACNA1A-253ENST00000637927 SPATA3Q8NHX4 192 aa11.74□□□□□ -0.53
CACNA1A-253ENST00000637927 NHLRC4P0CG21 123 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-253ENST00000637927 LINC00310P59036 64 aa11.73□□□□□ -0.53
CACNA1A-253ENST00000637927 M0R2T5 61 aa11.73□□□□□ -0.53
CACNA1A-253ENST00000637927 CNFNQ9BYD5 112 aa11.73□□□□□ -0.53
CACNA1A-253ENST00000637927 K7EQZ3 153 aa11.72□□□□□ -0.53
CACNA1A-253ENST00000637927 A0A0G2JQZ4 141 aa11.72□□□□□ -0.53
CACNA1A-253ENST00000637927 A0A1W2PNN7 141 aa11.72□□□□□ -0.53
CACNA1A-253ENST00000637927 AMELXQ99217 191 aa11.72□□□□□ -0.53
CACNA1A-253ENST00000637927 LINC00476Q8WZB0 136 aa11.71□□□□□ -0.53
CACNA1A-253ENST00000637927 LINC01600Q96MT4 127 aa11.71□□□□□ -0.54
CACNA1A-253ENST00000637927 CRIPTQ9P021 101 aa11.71□□□□□ -0.54
CACNA1A-253ENST00000637927 NAV2Q8IVL1 2488 aa11.7□□□□□ -0.54
CACNA1A-253ENST00000637927 C8orf87E5RJ46 101 aa11.69□□□□□ -0.54
CACNA1A-253ENST00000637927 IGLV5-37A0A075B6J1 123 aa11.69□□□□□ -0.54
CACNA1A-253ENST00000637927 PTPRBP23467 1997 aa11.69□□□□□ -0.54
CACNA1A-253ENST00000637927 DNAH10OSP0CZ25 163 aa11.69□□□□□ -0.54
CACNA1A-253ENST00000637927 CSNK1G2-AS1Q8NCQ2 148 aa11.67□□□□□ -0.54
CACNA1A-253ENST00000637927 Q6ZRP5 223 aa11.67□□□□□ -0.54
CACNA1A-253ENST00000637927 PIEZO2Q9H5I5 2752 aa11.67□□□□□ -0.54
CACNA1A-253ENST00000637927 Q8N2B8 174 aa11.66□□□□□ -0.54
CACNA1A-253ENST00000637927 A0A1B0GUV1 79 aa11.64□□□□□ -0.55
CACNA1A-253ENST00000637927 A0A096LNJ9 63 aa11.61□□□□□ -0.55
CACNA1A-253ENST00000637927 KRTAP24-1Q3LI83 254 aa11.61□□□□□ -0.55
CACNA1A-253ENST00000637927 NCOR2Q9Y618 2525 aa11.6□□□□□ -0.55
CACNA1A-253ENST00000637927 IGLV5-39A0A0G2JS06 123 aa11.6□□□□□ -0.55
CACNA1A-253ENST00000637927 NBDYA0A0U1RRE5 68 aa11.6□□□□□ -0.55
CACNA1A-253ENST00000637927 TRAV22A0A0B4J277 110 aa11.59□□□□□ -0.55
CACNA1A-253ENST00000637927 Q8NBF4 154 aa11.59□□□□□ -0.55
CACNA1A-253ENST00000637927 JMJD1CQ15652 2540 aa11.58□□□□□ -0.56
CACNA1A-253ENST00000637927 TM2D3Q9BRN9 247 aa11.58□□□□□ -0.56
CACNA1A-253ENST00000637927 C11orf72Q8NBR9 251 aa11.58□□□□□ -0.56
CACNA1A-253ENST00000637927 WIPF1O43516 503 aa11.58□□□□□ -0.56
CACNA1A-253ENST00000637927 LINC00588Q9Y4M8 146 aa11.57□□□□□ -0.56
CACNA1A-253ENST00000637927 IGF2RP11717 2491 aa11.56□□□□□ -0.56
CACNA1A-253ENST00000637927 FAM218AQ96MZ4 157 aa11.56□□□□□ -0.56
CACNA1A-253ENST00000637927 Q8N1X5 172 aa11.56□□□□□ -0.56
CACNA1A-253ENST00000637927 KIF25-AS1Q9Y6Z4 181 aa11.55□□□□□ -0.56
CACNA1A-253ENST00000637927 IGLV5-45A0A087WSX0 123 aa11.55□□□□□ -0.56
CACNA1A-253ENST00000637927 IGLV5-48A0A075B6I7 105 aa11.54□□□□□ -0.56
CACNA1A-253ENST00000637927 CXCL6P80162 114 aa11.53□□□□□ -0.56
CACNA1A-253ENST00000637927 Q6ZQT0 140 aa11.53□□□□□ -0.56
CACNA1A-253ENST00000637927 VPREB1P12018 145 aa11.52□□□□□ -0.57
CACNA1A-253ENST00000637927 TP53AIP1Q9HCN2 124 aa11.51□□□□□ -0.57
CACNA1A-253ENST00000637927 F8WDY8 70 aa11.51□□□□□ -0.57
CACNA1A-253ENST00000637927 IGLV1-50A0A075B6I6 118 aa11.51□□□□□ -0.57
CACNA1A-253ENST00000637927 LINC00304Q8N9R0 145 aa11.5□□□□□ -0.57
CACNA1A-253ENST00000637927 WWC2-AS2Q96NR7 200 aa11.5□□□□□ -0.57
CACNA1A-253ENST00000637927 COA5Q86WW8 74 aa11.48□□□□□ -0.57
CACNA1A-253ENST00000637927 A8MUN3 132 aa11.48□□□□□ -0.57
CACNA1A-253ENST00000637927 ZFYVE26Q68DK2 2539 aa11.47□□□□□ -0.57
CACNA1A-253ENST00000637927 BCE1O60756 84 aa11.46□□□□□ -0.57
CACNA1A-253ENST00000637927 RBM12B-AS1Q9P1G2 102 aa11.46□□□□□ -0.57
CACNA1A-253ENST00000637927 COL4A2P08572 1712 aa11.46□□□□□ -0.57
CACNA1A-253ENST00000637927 TRBV7-4A0A0J9YYF1 115 aa11.45□□□□□ -0.58
CACNA1A-253ENST00000637927 MYO9AB2RTY4 2548 aa11.45□□□□□ -0.58
CACNA1A-253ENST00000637927 MIR22HGQ0VDD5 57 aa11.44□□□□□ -0.58
CACNA1A-253ENST00000637927 TLN1Q9Y490 2541 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-253ENST00000637927 Q6ZRX8 168 aa11.43□□□□□ -0.58
CACNA1A-253ENST00000637927 LINC01561Q8N1V8 128 aa11.43□□□□□ -0.58
CACNA1A-253ENST00000637927 IGHV3OR16-9A0A0B4J2B5 98 aa11.42□□□□□ -0.58
CACNA1A-253ENST00000637927 ELOF1P60002 83 aaKnown RBP11.42□□□□□ -0.58
CACNA1A-253ENST00000637927 C15orf56Q8N910 161 aa11.42□□□□□ -0.58
CACNA1A-253ENST00000637927 WDR87Q6ZQQ6 2873 aa11.4□□□□□ -0.58
CACNA1A-253ENST00000637927 TLN2Q9Y4G6 2542 aa11.4□□□□□ -0.58
CACNA1A-253ENST00000637927 COX8CQ7Z4L0 72 aa11.4□□□□□ -0.58
CACNA1A-253ENST00000637927 MRPL34Q9BQ48 92 aaKnown RBP11.4□□□□□ -0.59
CACNA1A-253ENST00000637927 FN1P02751 2386 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-253ENST00000637927 LRRK2Q5S007 2527 aa11.36□□□□□ -0.59
CACNA1A-253ENST00000637927 CAMK2N1Q7Z7J9 78 aa11.36□□□□□ -0.59
CACNA1A-253ENST00000637927 Q8NAQ8 132 aa11.35□□□□□ -0.59
CACNA1A-253ENST00000637927 PCSK5Q92824 1860 aa11.35□□□□□ -0.59
CACNA1A-253ENST00000637927 PRO0628Q9UI54 55 aa11.35□□□□□ -0.59
CACNA1A-253ENST00000637927 ABCA12Q86UK0 2595 aa11.34□□□□□ -0.59
CACNA1A-253ENST00000637927 KRTAP10-11P60412 298 aa11.34□□□□□ -0.59
CACNA1A-253ENST00000637927 CENPFP49454 3210 aa11.33□□□□□ -0.6
CACNA1A-253ENST00000637927 PLA2G2DQ9UNK4 145 aa11.33□□□□□ -0.6
CACNA1A-253ENST00000637927 UTRNP46939 3433 aa11.33□□□□□ -0.6
CACNA1A-253ENST00000637927 LUZP6Q538Z0 58 aa11.33□□□□□ -0.6
CACNA1A-253ENST00000637927 UQCR11O14957 56 aa11.32□□□□□ -0.6
CACNA1A-253ENST00000637927 PIEZO1Q92508 2521 aa11.32□□□□□ -0.6
CACNA1A-253ENST00000637927 C10orf142B7Z368 130 aa11.32□□□□□ -0.6
CACNA1A-253ENST00000637927 A8MWP4 228 aa11.31□□□□□ -0.6
CACNA1A-253ENST00000637927 LINC00336Q6ZUF6 198 aa11.3□□□□□ -0.6
CACNA1A-253ENST00000637927 SMCPP49901 116 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-253ENST00000637927 F8P00451 2351 aa11.28□□□□□ -0.6
CACNA1A-253ENST00000637927 SETD2Q9BYW2 2564 aaPredicted RBP11.27□□□□□ -0.6
CACNA1A-253ENST00000637927 TLX1NBP0CAT3 122 aa11.26□□□□□ -0.61
CACNA1A-253ENST00000637927 CDC42SE1Q9NRR8 79 aa11.26□□□□□ -0.61
CACNA1A-253ENST00000637927 ZNF462Q96JM2 2506 aa11.25□□□□□ -0.61
CACNA1A-253ENST00000637927 Q6ZSA8 131 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms