RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 Q8NDZ9 215 aa9.89□□□□□ -0.83
CLN6-215ENST00000636674 IGLV10-54A0A075B6I4 117 aa9.89□□□□□ -0.83
CLN6-215ENST00000636674 KRTAP24-1Q3LI83 254 aa9.89□□□□□ -0.83
CLN6-215ENST00000636674 C6orf99Q4VX62 202 aa9.89□□□□□ -0.83
CLN6-215ENST00000636674 Q8N3U1 123 aa9.89□□□□□ -0.83
CLN6-215ENST00000636674 A0A0J9YWU9 116 aa9.88□□□□□ -0.83
CLN6-215ENST00000636674 IGHV4-30-4P0DP06 118 aa9.88□□□□□ -0.83
CLN6-215ENST00000636674 C9orf116Q5BN46 136 aaPredicted RBP9.88□□□□□ -0.83
CLN6-215ENST00000636674 LINC00575Q6W349 94 aa9.88□□□□□ -0.83
CLN6-215ENST00000636674 SERP2Q8N6R1 65 aa9.88□□□□□ -0.83
CLN6-215ENST00000636674 APOC4P55056 127 aa9.87□□□□□ -0.83
CLN6-215ENST00000636674 DAD1P61803 113 aa9.87□□□□□ -0.83
CLN6-215ENST00000636674 USP17L23D6RBM5 183 aa9.87□□□□□ -0.83
CLN6-215ENST00000636674 DEFB135Q30KP9 77 aa9.87□□□□□ -0.83
CLN6-215ENST00000636674 A0A087WVE0 104 aa9.86□□□□□ -0.83
CLN6-215ENST00000636674 SPAG11BQ08648 103 aa9.86□□□□□ -0.83
CLN6-215ENST00000636674 LELP1Q5T871 98 aa9.86□□□□□ -0.83
CLN6-215ENST00000636674 PRR34Q9NV39 138 aa9.85□□□□□ -0.83
CLN6-215ENST00000636674 GVQW2A0A096LPI5 108 aaPredicted RBP9.85□□□□□ -0.83
CLN6-215ENST00000636674 TRBV10-3A0A0K0K1G6 114 aa9.85□□□□□ -0.83
CLN6-215ENST00000636674 IGLV6-57P01721 117 aa9.85□□□□□ -0.83
CLN6-215ENST00000636674 MIFP14174 115 aa9.85□□□□□ -0.83
CLN6-215ENST00000636674 Q8NAQ8 132 aa9.85□□□□□ -0.83
CLN6-215ENST00000636674 SPATA3Q8NHX4 192 aa9.85□□□□□ -0.83
CLN6-215ENST00000636674 ZNF561-AS1K7EIQ3 104 aa9.84□□□□□ -0.83
CLN6-215ENST00000636674 UPK3BQ9BT76 320 aa9.84□□□□□ -0.83
CLN6-215ENST00000636674 LOC110117498A0A087WWA1 95 aa9.83□□□□□ -0.84
CLN6-215ENST00000636674 C10orf25Q5T742 122 aa9.83□□□□□ -0.84
CLN6-215ENST00000636674 hADV29S1A0JD25 119 aa9.83□□□□□ -0.84
CLN6-215ENST00000636674 H3BQ85 93 aa9.83□□□□□ -0.84
CLN6-215ENST00000636674 DEFB4AO15263 64 aa9.83□□□□□ -0.84
CLN6-215ENST00000636674 UNQ6190/PRO20217Q6UXQ8 127 aa9.83□□□□□ -0.84
CLN6-215ENST00000636674 C6orf223Q8N319 242 aa9.83□□□□□ -0.84
CLN6-215ENST00000636674 CELA1Q9UNI1 258 aa9.83□□□□□ -0.84
CLN6-215ENST00000636674 STAB1Q9NY15 2570 aa9.83□□□□□ -0.84
CLN6-215ENST00000636674 Q6ZQT0 140 aa9.82□□□□□ -0.84
CLN6-215ENST00000636674 UBL5Q9BZL1 73 aa9.82□□□□□ -0.84
CLN6-215ENST00000636674 RBM3P98179 157 aaKnown RBP9.8□□□□□ -0.84
CLN6-215ENST00000636674 SPART-AS1P0CW21 52 aa9.8□□□□□ -0.84
CLN6-215ENST00000636674 ANK2Q01484 3957 aa9.8□□□□□ -0.84
CLN6-215ENST00000636674 TMEM258P61165 79 aa9.79□□□□□ -0.84
CLN6-215ENST00000636674 J3KT08 172 aa9.78□□□□□ -0.84
CLN6-215ENST00000636674 RPS28P62857 69 aaKnown RBP9.78□□□□□ -0.84
CLN6-215ENST00000636674 CYSTM1Q9H1C7 97 aa9.78□□□□□ -0.84
CLN6-215ENST00000636674 ENHOQ6UWT2 76 aa9.78□□□□□ -0.84
CLN6-215ENST00000636674 NBEAL2Q6ZNJ1 2754 aa9.78□□□□□ -0.84
CLN6-215ENST00000636674 PDE6GP18545 87 aa9.77□□□□□ -0.85
CLN6-215ENST00000636674 KLK12Q9UKR0 248 aa9.77□□□□□ -0.85
CLN6-215ENST00000636674 C6orf48Q9UBA6 75 aa9.76□□□□□ -0.85
CLN6-215ENST00000636674 TRAV23DV6A0A075B6W5 121 aa9.75□□□□□ -0.85
CLN6-215ENST00000636674 BCE1O60756 84 aa9.75□□□□□ -0.85
CLN6-215ENST00000636674 GHRHP01286 108 aa9.75□□□□□ -0.85
CLN6-215ENST00000636674 Q6ZQY7 126 aa9.75□□□□□ -0.85
CLN6-215ENST00000636674 FAM19A1Q7Z5A9 133 aa9.75□□□□□ -0.85
CLN6-215ENST00000636674 DIRC1Q969H9 104 aa9.75□□□□□ -0.85
CLN6-215ENST00000636674 LAMTOR3Q9UHA4 124 aa9.75□□□□□ -0.85
CLN6-215ENST00000636674 TRBV7-6A0A0J9YX20 115 aa9.74□□□□□ -0.85
CLN6-215ENST00000636674 TENM1Q9UKZ4 2725 aa9.74□□□□□ -0.85
CLN6-215ENST00000636674 VWFP04275 2813 aa9.74□□□□□ -0.85
CLN6-215ENST00000636674 WIPF1O43516 503 aa9.73□□□□□ -0.85
CLN6-215ENST00000636674 HTN3P15516 51 aa9.73□□□□□ -0.85
CLN6-215ENST00000636674 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.73□□□□□ -0.85
CLN6-215ENST00000636674 WFDC9Q8NEX5 89 aa9.73□□□□□ -0.85
CLN6-215ENST00000636674 DSCR8Q96T75 97 aa9.73□□□□□ -0.85
CLN6-215ENST00000636674 ZNF73O43830 326 aaPredicted RBP9.71□□□□□ -0.86
CLN6-215ENST00000636674 ELOF1P60002 83 aaKnown RBP9.71□□□□□ -0.86
CLN6-215ENST00000636674 LOC107984640A0A0U1RRK4 108 aa9.7□□□□□ -0.86
CLN6-215ENST00000636674 NDUFC2-KCTD14E9PQ53 114 aa9.7□□□□□ -0.86
CLN6-215ENST00000636674 H3BNG1 76 aa9.7□□□□□ -0.86
CLN6-215ENST00000636674 M0R2N4 97 aa9.7□□□□□ -0.86
CLN6-215ENST00000636674 LINC01547P58512 204 aaPredicted RBP9.7□□□□□ -0.86
CLN6-215ENST00000636674 Q6ZVQ6 151 aa9.7□□□□□ -0.86
CLN6-215ENST00000636674 TRBV7-4A0A0J9YYF1 115 aa9.7□□□□□ -0.86
CLN6-215ENST00000636674 COX7BP24311 80 aa9.7□□□□□ -0.86
CLN6-215ENST00000636674 VPREB1P12018 145 aa9.69□□□□□ -0.86
CLN6-215ENST00000636674 CXCL6P80162 114 aa9.69□□□□□ -0.86
CLN6-215ENST00000636674 KRTAP26-1Q6PEX3 210 aa9.69□□□□□ -0.86
CLN6-215ENST00000636674 XAGE1AQ9HD64 81 aa9.69□□□□□ -0.86
CLN6-215ENST00000636674 EGFEM1PQ0D2K5 195 aa9.68□□□□□ -0.86
CLN6-215ENST00000636674 DPH3Q96FX2 82 aa9.68□□□□□ -0.86
CLN6-215ENST00000636674 C5orf47Q569G3 176 aa9.67□□□□□ -0.86
CLN6-215ENST00000636674 M0R378 163 aa9.66□□□□□ -0.86
CLN6-215ENST00000636674 CAMK2N2Q96S95 79 aa9.66□□□□□ -0.86
CLN6-215ENST00000636674 TRAV7A0A075B6U4 112 aa9.65□□□□□ -0.86
CLN6-215ENST00000636674 FAM19A5Q7Z5A7 132 aaPredicted RBP9.65□□□□□ -0.86
CLN6-215ENST00000636674 WFDC10BQ8IUB3 73 aa9.65□□□□□ -0.87
CLN6-215ENST00000636674 HAMPP81172 84 aa9.63□□□□□ -0.87
CLN6-215ENST00000636674 LINC00528Q8N1L1 170 aa9.63□□□□□ -0.87
CLN6-215ENST00000636674 C15orf56Q8N910 161 aa9.63□□□□□ -0.87
CLN6-215ENST00000636674 F8WDY8 70 aa9.63□□□□□ -0.87
CLN6-215ENST00000636674 HIGD2BQ4VC39 106 aa9.63□□□□□ -0.87
CLN6-215ENST00000636674 KPRPQ5T749 579 aaPredicted RBP9.63□□□□□ -0.87
CLN6-215ENST00000636674 Q6ZRU5 148 aa9.62□□□□□ -0.87
CLN6-215ENST00000636674 C20orf197Q8N268 126 aa9.61□□□□□ -0.87
CLN6-215ENST00000636674 OXTP01178 125 aa9.59□□□□□ -0.87
CLN6-215ENST00000636674 KLKP1Q107X0 134 aa9.59□□□□□ -0.87
CLN6-215ENST00000636674 FBN3Q75N90 2809 aa9.58□□□□□ -0.88
CLN6-215ENST00000636674 TRRAPQ9Y4A5 3859 aa9.58□□□□□ -0.88
CLN6-215ENST00000636674 TRAV10A0A0B4J240 114 aa9.57□□□□□ -0.88
CLN6-215ENST00000636674 H7BZZ5 65 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms