RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 TMEM126AQ9H061 195 aa10.58□□□□□ -0.72
PNKP-225ENST00000636214 TRAV12-1A0A0B4J245 112 aa10.57□□□□□ -0.72
PNKP-225ENST00000636214 FAM229BQ4G0N7 80 aa10.57□□□□□ -0.72
PNKP-225ENST00000636214 ANAPC11Q9NYG5 84 aa10.57□□□□□ -0.72
PNKP-225ENST00000636214 IGKV2D-26A0A0A0MRZ7 120 aa10.56□□□□□ -0.72
PNKP-225ENST00000636214 TMEM238C9JI98 176 aa10.56□□□□□ -0.72
PNKP-225ENST00000636214 A0A0U1RRA0 63 aa10.55□□□□□ -0.72
PNKP-225ENST00000636214 TMEM223A0PJW6 202 aa10.55□□□□□ -0.72
PNKP-225ENST00000636214 HSBP1O75506 76 aa10.55□□□□□ -0.72
PNKP-225ENST00000636214 MEIG1Q5JSS6 88 aa10.55□□□□□ -0.72
PNKP-225ENST00000636214 CBLN2Q8IUK8 224 aa10.54□□□□□ -0.72
PNKP-225ENST00000636214 M0R378 163 aa10.53□□□□□ -0.72
PNKP-225ENST00000636214 LINC00587B1AMM8 73 aa10.52□□□□□ -0.73
PNKP-225ENST00000636214 LINC00304Q8N9R0 145 aa10.52□□□□□ -0.73
PNKP-225ENST00000636214 H0Y8G0 127 aa10.51□□□□□ -0.73
PNKP-225ENST00000636214 HERV-K104P63124 156 aa10.51□□□□□ -0.73
PNKP-225ENST00000636214 KRTAP13-2Q52LG2 175 aa10.51□□□□□ -0.73
PNKP-225ENST00000636214 HIGD2AQ9BW72 106 aa10.51□□□□□ -0.73
PNKP-225ENST00000636214 SMIM13P0DJ93 91 aa10.5□□□□□ -0.73
PNKP-225ENST00000636214 YPEL4Q96NS1 127 aa10.5□□□□□ -0.73
PNKP-225ENST00000636214 BOD1L2Q8IYS8 172 aa10.49□□□□□ -0.73
PNKP-225ENST00000636214 FAM19A2Q8N3H0 131 aa10.49□□□□□ -0.73
PNKP-225ENST00000636214 Q8NDZ9 215 aa10.49□□□□□ -0.73
PNKP-225ENST00000636214 MAP1LC3CQ9BXW4 147 aa10.49□□□□□ -0.73
PNKP-225ENST00000636214 NDUFA12Q9UI09 145 aa10.49□□□□□ -0.73
PNKP-225ENST00000636214 MYMXA0A1B0GTQ4 84 aa10.48□□□□□ -0.73
PNKP-225ENST00000636214 S100A12P80511 92 aa10.48□□□□□ -0.73
PNKP-225ENST00000636214 MIR7-3HGQ8N6C7 128 aa10.47□□□□□ -0.73
PNKP-225ENST00000636214 PLEKHB2Q96CS7 222 aa10.47□□□□□ -0.73
PNKP-225ENST00000636214 ZNF706Q9Y5V0 76 aaPredicted RBP10.47□□□□□ -0.73
PNKP-225ENST00000636214 PRYO14603 147 aa10.46□□□□□ -0.73
PNKP-225ENST00000636214 NCR3O14931 201 aa10.46□□□□□ -0.73
PNKP-225ENST00000636214 LEPROTL1O95214 131 aa10.46□□□□□ -0.73
PNKP-225ENST00000636214 TRGC2P03986 189 aa10.45□□□□□ -0.74
PNKP-225ENST00000636214 PLNP26678 52 aa10.44□□□□□ -0.74
PNKP-225ENST00000636214 HERVK_113P61574 105 aa10.44□□□□□ -0.74
PNKP-225ENST00000636214 ETDCA0A1B0GVM5 59 aa10.43□□□□□ -0.74
PNKP-225ENST00000636214 RETNLBQ9BQ08 111 aa10.43□□□□□ -0.74
PNKP-225ENST00000636214 HSPB8Q9UJY1 196 aa10.43□□□□□ -0.74
PNKP-225ENST00000636214 A0A0U1RQV1 116 aa10.42□□□□□ -0.74
PNKP-225ENST00000636214 SERF1AO75920 110 aa10.42□□□□□ -0.74
PNKP-225ENST00000636214 CTAG1AP78358 180 aa10.42□□□□□ -0.74
PNKP-225ENST00000636214 LEPROTO15243 131 aa10.41□□□□□ -0.74
PNKP-225ENST00000636214 SPRR4Q96PI1 79 aa10.41□□□□□ -0.74
PNKP-225ENST00000636214 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
PNKP-225ENST00000636214 C3orf22Q8N5N4 141 aa10.4□□□□□ -0.74
PNKP-225ENST00000636214 LINC00337Q8N6G1 96 aa10.4□□□□□ -0.74
PNKP-225ENST00000636214 MIEN1Q9BRT3 115 aa10.4□□□□□ -0.74
PNKP-225ENST00000636214 DPM2O94777 84 aa10.39□□□□□ -0.75
PNKP-225ENST00000636214 FABP4P15090 132 aa10.39□□□□□ -0.75
PNKP-225ENST00000636214 LGALS3P17931 250 aaKnown RBP10.39□□□□□ -0.75
PNKP-225ENST00000636214 SPAG11AQ6PDA7 123 aa10.39□□□□□ -0.75
PNKP-225ENST00000636214 KCNQ1DNQ9H478 68 aa10.39□□□□□ -0.75
PNKP-225ENST00000636214 TRBV10-3A0A0K0K1G6 114 aa10.38□□□□□ -0.75
PNKP-225ENST00000636214 J3QQQ9 107 aa10.37□□□□□ -0.75
PNKP-225ENST00000636214 NMUP48645 174 aa10.37□□□□□ -0.75
PNKP-225ENST00000636214 CDIP1Q9H305 208 aa10.37□□□□□ -0.75
PNKP-225ENST00000636214 IGLV7-46A0A075B6I9 117 aa10.36□□□□□ -0.75
PNKP-225ENST00000636214 IGKCP01834 107 aa10.36□□□□□ -0.75
PNKP-225ENST00000636214 TSPEAR-AS2P59090 65 aa10.36□□□□□ -0.75
PNKP-225ENST00000636214 DAND5Q8N907 189 aa10.36□□□□□ -0.75
PNKP-225ENST00000636214 DDTP30046 118 aa10.35□□□□□ -0.75
PNKP-225ENST00000636214 SPRR1AP35321 89 aa10.35□□□□□ -0.75
PNKP-225ENST00000636214 SMCR5Q8TEV8 140 aa10.35□□□□□ -0.75
PNKP-225ENST00000636214 PPDPFQ9H3Y8 114 aa10.34□□□□□ -0.75
PNKP-225ENST00000636214 TRBV10-2A0A0K0K1G8 114 aa10.33□□□□□ -0.76
PNKP-225ENST00000636214 LINC00310P59036 64 aa10.33□□□□□ -0.76
PNKP-225ENST00000636214 S100A7L2Q5SY68 101 aa10.33□□□□□ -0.76
PNKP-225ENST00000636214 PMCHL2Q9BQD1 86 aa10.33□□□□□ -0.76
PNKP-225ENST00000636214 SPANXB1Q9NS25 103 aaPredicted RBP10.33□□□□□ -0.76
PNKP-225ENST00000636214 TPRXLQ17RH7 258 aa10.32□□□□□ -0.76
PNKP-225ENST00000636214 SLC7A5P1Q8MH63 180 aa10.32□□□□□ -0.76
PNKP-225ENST00000636214 LOC107984156A0A0G2JMH3 177 aa10.31□□□□□ -0.76
PNKP-225ENST00000636214 ARL17AQ8IVW1 177 aa10.31□□□□□ -0.76
PNKP-225ENST00000636214 Q8NBF4 154 aa10.31□□□□□ -0.76
PNKP-225ENST00000636214 MUC2Q02817 5179 aa10.31□□□□□ -0.76
PNKP-225ENST00000636214 KRTAP4-16G5E9R7 235 aaPredicted RBP10.3□□□□□ -0.76
PNKP-225ENST00000636214 GAGE2AQ6NT46 116 aa10.3□□□□□ -0.76
PNKP-225ENST00000636214 B5MCH6 92 aa10.28□□□□□ -0.76
PNKP-225ENST00000636214 COLCA2A8K830 154 aa10.27□□□□□ -0.77
PNKP-225ENST00000636214 NDUFC2O95298 119 aa10.27□□□□□ -0.77
PNKP-225ENST00000636214 JOSD1Q15040 202 aaPredicted RBP10.27□□□□□ -0.77
PNKP-225ENST00000636214 FP248Q71RG6 208 aaPredicted RBP10.27□□□□□ -0.77
PNKP-225ENST00000636214 IGLV9-49A0A0B4J1Y8 123 aa10.26□□□□□ -0.77
PNKP-225ENST00000636214 NPC2P61916 151 aa10.26□□□□□ -0.77
PNKP-225ENST00000636214 LINC00483Q53H64 154 aa10.26□□□□□ -0.77
PNKP-225ENST00000636214 CBY1Q9Y3M2 126 aa10.26□□□□□ -0.77
PNKP-225ENST00000636214 TRAV23DV6A0A075B6W5 121 aa10.25□□□□□ -0.77
PNKP-225ENST00000636214 SPINK1P00995 79 aa10.25□□□□□ -0.77
PNKP-225ENST00000636214 Q6ZRX8 168 aa10.25□□□□□ -0.77
PNKP-225ENST00000636214 E9PLD3 99 aa10.24□□□□□ -0.77
PNKP-225ENST00000636214 HINT1P49773 126 aaPredicted RBP10.24□□□□□ -0.77
PNKP-225ENST00000636214 MOBPQ13875 183 aa10.24□□□□□ -0.77
PNKP-225ENST00000636214 A0A0J9YXY3 114 aa10.23□□□□□ -0.77
PNKP-225ENST00000636214 IGLV6-57P01721 117 aa10.23□□□□□ -0.77
PNKP-225ENST00000636214 ERC2-IT1O76042 136 aa10.22□□□□□ -0.77
PNKP-225ENST00000636214 SYS1-DBNDD2H3BUS1 97 aa10.21□□□□□ -0.77
PNKP-225ENST00000636214 ZNF73O43830 326 aaPredicted RBP10.21□□□□□ -0.77
PNKP-225ENST00000636214 SSBP3-AS1Q7Z2R9 100 aa10.21□□□□□ -0.77
PNKP-225ENST00000636214 Q9BRP9 147 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms