RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 PRO1933Q9H354 126 aa5.36□□□□□ -1.55
CDKL5-209ENST00000635828 ERG28Q9UKR5 140 aa5.36□□□□□ -1.55
CDKL5-209ENST00000635828 CIRBPQ14011 172 aaKnown RBP5.36□□□□□ -1.55
CDKL5-209ENST00000635828 TRBV30A0A0K0K1B3 111 aa5.35□□□□□ -1.55
CDKL5-209ENST00000635828 LOC107984640A0A0U1RRK4 108 aa5.35□□□□□ -1.55
CDKL5-209ENST00000635828 PHF5AQ7RTV0 110 aaKnown RBP5.35□□□□□ -1.55
CDKL5-209ENST00000635828 PKHD1L1Q86WI1 4243 aa5.35□□□□□ -1.55
CDKL5-209ENST00000635828 PAM16Q9Y3D7 125 aa5.35□□□□□ -1.55
CDKL5-209ENST00000635828 LGALS3P17931 250 aaKnown RBP5.34□□□□□ -1.55
CDKL5-209ENST00000635828 LINC00158P58513 81 aa5.34□□□□□ -1.55
CDKL5-209ENST00000635828 SND1-IT1Q9HBX3 110 aa5.34□□□□□ -1.55
CDKL5-209ENST00000635828 A0A0J9YXY3 114 aa5.34□□□□□ -1.56
CDKL5-209ENST00000635828 MIR7-3HGQ8N6C7 128 aa5.34□□□□□ -1.56
CDKL5-209ENST00000635828 C14orf144Q96I85 54 aa5.34□□□□□ -1.56
CDKL5-209ENST00000635828 ZNF815PA8K554 130 aa5.33□□□□□ -1.56
CDKL5-209ENST00000635828 JOSD1Q15040 202 aaPredicted RBP5.33□□□□□ -1.56
CDKL5-209ENST00000635828 MEIG1Q5JSS6 88 aa5.33□□□□□ -1.56
CDKL5-209ENST00000635828 SOSTDC1Q6X4U4 206 aa5.33□□□□□ -1.56
CDKL5-209ENST00000635828 LITAFQ99732 161 aa5.33□□□□□ -1.56
CDKL5-209ENST00000635828 C20orf202A1L168 122 aa5.33□□□□□ -1.56
CDKL5-209ENST00000635828 A4D1N5 150 aa5.33□□□□□ -1.56
CDKL5-209ENST00000635828 CDK2AP2O75956 126 aa5.33□□□□□ -1.56
CDKL5-209ENST00000635828 TLX1NBP0CAT3 122 aa5.33□□□□□ -1.56
CDKL5-209ENST00000635828 FLG2Q5D862 2391 aaPredicted RBP5.33□□□□□ -1.56
CDKL5-209ENST00000635828 GAGE10A6NGK3 116 aa5.33□□□□□ -1.56
CDKL5-209ENST00000635828 CXCL5P42830 114 aa5.33□□□□□ -1.56
CDKL5-209ENST00000635828 HERVK_113P61574 105 aa5.33□□□□□ -1.56
CDKL5-209ENST00000635828 PLAC8Q9NZF1 115 aa5.32□□□□□ -1.56
CDKL5-209ENST00000635828 RPL37AP8A6NKH3 93 aa5.31□□□□□ -1.56
CDKL5-209ENST00000635828 HSBP1L1C9JCN9 74 aa5.31□□□□□ -1.56
CDKL5-209ENST00000635828 HNRNPA3P51991 378 aaKnown RBP5.31□□□□□ -1.56
CDKL5-209ENST00000635828 MYMXA0A1B0GTQ4 84 aa5.31□□□□□ -1.56
CDKL5-209ENST00000635828 KRTAP10-4P60372 401 aaPredicted RBP5.31□□□□□ -1.56
CDKL5-209ENST00000635828 LINC00528Q8N1L1 170 aa5.31□□□□□ -1.56
CDKL5-209ENST00000635828 SPATA45Q537H7 98 aa5.3□□□□□ -1.56
CDKL5-209ENST00000635828 Q5VSD8 79 aa5.3□□□□□ -1.56
CDKL5-209ENST00000635828 FAT3Q8TDW7 4589 aa5.3□□□□□ -1.56
CDKL5-209ENST00000635828 C22orf24Q9Y442 160 aa5.3□□□□□ -1.56
CDKL5-209ENST00000635828 M0QXV9 152 aa5.29□□□□□ -1.56
CDKL5-209ENST00000635828 IGKV2-28A0A075B6P5 120 aa5.29□□□□□ -1.56
CDKL5-209ENST00000635828 IGKV2D-28P01615 120 aa5.29□□□□□ -1.56
CDKL5-209ENST00000635828 SMIM6P0DI80 62 aa5.29□□□□□ -1.56
CDKL5-209ENST00000635828 F8WDY8 70 aa5.29□□□□□ -1.56
CDKL5-209ENST00000635828 NCR3O14931 201 aa5.29□□□□□ -1.56
CDKL5-209ENST00000635828 BOD1L2Q8IYS8 172 aa5.28□□□□□ -1.56
CDKL5-209ENST00000635828 HERC1Q15751 4861 aa5.28□□□□□ -1.56
CDKL5-209ENST00000635828 VPREB1P12018 145 aa5.28□□□□□ -1.56
CDKL5-209ENST00000635828 SCGB1D4Q6XE38 83 aa5.28□□□□□ -1.56
CDKL5-209ENST00000635828 VAMP8Q9BV40 100 aa5.28□□□□□ -1.56
CDKL5-209ENST00000635828 EPM2AB3EWF7 344 aa5.27□□□□□ -1.57
CDKL5-209ENST00000635828 HERV-K104P63124 156 aa5.27□□□□□ -1.57
CDKL5-209ENST00000635828 Q8N1X5 172 aa5.27□□□□□ -1.57
CDKL5-209ENST00000635828 COX17Q14061 63 aa5.27□□□□□ -1.57
CDKL5-209ENST00000635828 LINC00167Q96N53 147 aa5.27□□□□□ -1.57
CDKL5-209ENST00000635828 PSORS1C2Q9UIG4 136 aa5.27□□□□□ -1.57
CDKL5-209ENST00000635828 C7orf33Q8WU49 177 aa5.26□□□□□ -1.57
CDKL5-209ENST00000635828 LINC00474Q9P2X8 69 aa5.26□□□□□ -1.57
CDKL5-209ENST00000635828 TMEM238C9JI98 176 aa5.26□□□□□ -1.57
CDKL5-209ENST00000635828 COX8AP10176 69 aa5.26□□□□□ -1.57
CDKL5-209ENST00000635828 C2orf91Q6ZV80 131 aa5.26□□□□□ -1.57
CDKL5-209ENST00000635828 LINC00308Q8TCZ7 52 aa5.26□□□□□ -1.57
CDKL5-209ENST00000635828 MRPL55Q7Z7F7 128 aaKnown RBP5.25□□□□□ -1.57
CDKL5-209ENST00000635828 TNXBP22105 4242 aa5.25□□□□□ -1.57
CDKL5-209ENST00000635828 DMBT1Q9UGM3 2413 aaPredicted RBP5.25□□□□□ -1.57
CDKL5-209ENST00000635828 MUSTN1Q8IVN3 82 aa5.25□□□□□ -1.57
CDKL5-209ENST00000635828 UBE2BP63146 152 aa5.24□□□□□ -1.57
CDKL5-209ENST00000635828 VAMP3Q15836 100 aa5.24□□□□□ -1.57
CDKL5-209ENST00000635828 RPL37AP61513 92 aaKnown RBP5.23□□□□□ -1.57
CDKL5-209ENST00000635828 C1orf137Q5JT78 98 aa5.23□□□□□ -1.57
CDKL5-209ENST00000635828 SFTA2Q6UW10 78 aa5.23□□□□□ -1.57
CDKL5-209ENST00000635828 NKAPP1Q8N9T2 125 aa5.23□□□□□ -1.57
CDKL5-209ENST00000635828 TRBV10-3A0A0K0K1G6 114 aa5.22□□□□□ -1.57
CDKL5-209ENST00000635828 LINC00337Q8N6G1 96 aa5.22□□□□□ -1.57
CDKL5-209ENST00000635828 M0R143 59 aa5.22□□□□□ -1.57
CDKL5-209ENST00000635828 DDTP30046 118 aa5.22□□□□□ -1.57
CDKL5-209ENST00000635828 IGLV1-50A0A075B6I6 118 aa5.21□□□□□ -1.57
CDKL5-209ENST00000635828 FAM229AH3BQW9 127 aa5.21□□□□□ -1.57
CDKL5-209ENST00000635828 MIEN1Q9BRT3 115 aa5.21□□□□□ -1.57
CDKL5-209ENST00000635828 SPANXDQ9BXN6 97 aa5.21□□□□□ -1.58
CDKL5-209ENST00000635828 SPANXCQ9NY87 97 aa5.21□□□□□ -1.58
CDKL5-209ENST00000635828 PLA2G2DQ9UNK4 145 aa5.21□□□□□ -1.58
CDKL5-209ENST00000635828 LOC107984156A0A0G2JMH3 177 aa5.21□□□□□ -1.58
CDKL5-209ENST00000635828 PRLHP81277 87 aa5.21□□□□□ -1.58
CDKL5-209ENST00000635828 SRSF9Q13242 221 aaKnown RBP eCLIP5.21□□□□□ -1.58
CDKL5-209ENST00000635828 ARL17AQ8IVW1 177 aa5.21□□□□□ -1.58
CDKL5-209ENST00000635828 TIMM17BO60830 172 aa5.2□□□□□ -1.58
CDKL5-209ENST00000635828 SLC25A34Q6PIV7 304 aa5.2□□□□□ -1.58
CDKL5-209ENST00000635828 IGLV5-37A0A075B6J1 123 aa5.2□□□□□ -1.58
CDKL5-209ENST00000635828 M0R378 163 aa5.2□□□□□ -1.58
CDKL5-209ENST00000635828 HIST1H4GQ99525 98 aa5.19□□□□□ -1.58
CDKL5-209ENST00000635828 TMEM126AQ9H061 195 aa5.19□□□□□ -1.58
CDKL5-209ENST00000635828 ANAPC11Q9NYG5 84 aa5.19□□□□□ -1.58
CDKL5-209ENST00000635828 RPL24P83731 157 aaKnown RBP5.18□□□□□ -1.58
CDKL5-209ENST00000635828 GTF2H5Q6ZYL4 71 aa5.18□□□□□ -1.58
CDKL5-209ENST00000635828 PKIGQ9Y2B9 76 aa5.18□□□□□ -1.58
CDKL5-209ENST00000635828 DLEU1O43261 78 aa5.18□□□□□ -1.58
CDKL5-209ENST00000635828 FXYD2P54710 66 aa5.18□□□□□ -1.58
CDKL5-209ENST00000635828 OR13C6PQ8NH95 151 aa5.18□□□□□ -1.58
CDKL5-209ENST00000635828 SPANXB1Q9NS25 103 aaPredicted RBP5.17□□□□□ -1.58
CDKL5-209ENST00000635828 A0A1B0GV72 72 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms