RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 H3BRM9 83 aa7.18□□□□□ -1.26
LINC00339-206ENST00000634451 LCE2BO14633 110 aa7.18□□□□□ -1.26
LINC00339-206ENST00000634451 G0S2P27469 103 aa7.18□□□□□ -1.26
LINC00339-206ENST00000634451 NDUFA6P56556 154 aa7.18□□□□□ -1.26
LINC00339-206ENST00000634451 CTAG1AP78358 180 aa7.18□□□□□ -1.26
LINC00339-206ENST00000634451 KRTAP19-2Q3LHN2 52 aa7.18□□□□□ -1.26
LINC00339-206ENST00000634451 SPAG11AQ6PDA7 123 aa7.18□□□□□ -1.26
LINC00339-206ENST00000634451 RPL24P83731 157 aaKnown RBP7.17□□□□□ -1.26
LINC00339-206ENST00000634451 URB1-AS1Q96HZ7 61 aa7.17□□□□□ -1.26
LINC00339-206ENST00000634451 C11orf86A6NJI1 115 aa7.16□□□□□ -1.26
LINC00339-206ENST00000634451 PMCHL1Q16048 86 aa7.16□□□□□ -1.26
LINC00339-206ENST00000634451 C4orf48Q5BLP8 95 aa7.16□□□□□ -1.26
LINC00339-206ENST00000634451 GNB1LQ9BYB4 327 aa7.16□□□□□ -1.26
LINC00339-206ENST00000634451 NCR3O14931 201 aa7.15□□□□□ -1.26
LINC00339-206ENST00000634451 FA2HQ7L5A8 372 aa7.15□□□□□ -1.26
LINC00339-206ENST00000634451 SMCR5Q8TEV8 140 aa7.15□□□□□ -1.26
LINC00339-206ENST00000634451 ERC2-IT1O76042 136 aa7.14□□□□□ -1.27
LINC00339-206ENST00000634451 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
LINC00339-206ENST00000634451 LINC00158P58513 81 aa7.13□□□□□ -1.27
LINC00339-206ENST00000634451 MOBPQ13875 183 aa7.13□□□□□ -1.27
LINC00339-206ENST00000634451 COX17Q14061 63 aa7.13□□□□□ -1.27
LINC00339-206ENST00000634451 Q8N377 158 aa7.13□□□□□ -1.27
LINC00339-206ENST00000634451 IGLV9-49A0A0B4J1Y8 123 aa7.12□□□□□ -1.27
LINC00339-206ENST00000634451 KRTAP4-16G5E9R7 235 aaPredicted RBP7.12□□□□□ -1.27
LINC00339-206ENST00000634451 SPRR1AP35321 89 aa7.12□□□□□ -1.27
LINC00339-206ENST00000634451 MT1HP80294 61 aa7.12□□□□□ -1.27
LINC00339-206ENST00000634451 XP32Q5T750 250 aa7.12□□□□□ -1.27
LINC00339-206ENST00000634451 GAGE2AQ6NT46 116 aa7.12□□□□□ -1.27
LINC00339-206ENST00000634451 SMCO4Q9NRQ5 59 aa7.12□□□□□ -1.27
LINC00339-206ENST00000634451 SPINK1P00995 79 aa7.11□□□□□ -1.27
LINC00339-206ENST00000634451 LINC00483Q53H64 154 aa7.11□□□□□ -1.27
LINC00339-206ENST00000634451 TMEM170BQ5T4T1 132 aa7.11□□□□□ -1.27
LINC00339-206ENST00000634451 ZNF706Q9Y5V0 76 aaPredicted RBP7.11□□□□□ -1.27
LINC00339-206ENST00000634451 TRBV10-3A0A0K0K1G6 114 aa7.1□□□□□ -1.27
LINC00339-206ENST00000634451 PRYO14603 147 aa7.1□□□□□ -1.27
LINC00339-206ENST00000634451 SMIM13P0DJ93 91 aa7.1□□□□□ -1.27
LINC00339-206ENST00000634451 FABP9Q0Z7S8 132 aa7.1□□□□□ -1.27
LINC00339-206ENST00000634451 BOD1L2Q8IYS8 172 aa7.1□□□□□ -1.27
LINC00339-206ENST00000634451 BAGE3Q86Y29 109 aa7.09□□□□□ -1.27
LINC00339-206ENST00000634451 LINC01549A6NIU2 74 aa7.08□□□□□ -1.28
LINC00339-206ENST00000634451 KCNQ1DNQ9H478 68 aa7.08□□□□□ -1.28
LINC00339-206ENST00000634451 TRAV9-1A0A075B6T8 112 aa7.07□□□□□ -1.28
LINC00339-206ENST00000634451 ETDCA0A1B0GVM5 59 aa7.07□□□□□ -1.28
LINC00339-206ENST00000634451 MIR7-3HGQ8N6C7 128 aa7.07□□□□□ -1.28
LINC00339-206ENST00000634451 C18orf32Q8TCD1 76 aa7.07□□□□□ -1.28
LINC00339-206ENST00000634451 Q9BRP9 147 aa7.07□□□□□ -1.28
LINC00339-206ENST00000634451 TMEM223A0PJW6 202 aa7.06□□□□□ -1.28
LINC00339-206ENST00000634451 B5MCH6 92 aa7.06□□□□□ -1.28
LINC00339-206ENST00000634451 HBDP02042 147 aa7.06□□□□□ -1.28
LINC00339-206ENST00000634451 TMEM218A2RU14 115 aa7.05□□□□□ -1.28
LINC00339-206ENST00000634451 LINC00614P0C842 121 aa7.04□□□□□ -1.28
LINC00339-206ENST00000634451 PCOTHQ58A44 107 aa7.04□□□□□ -1.28
LINC00339-206ENST00000634451 CHTOPQ9Y3Y2 248 aaKnown RBP7.04□□□□□ -1.28
LINC00339-206ENST00000634451 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
LINC00339-206ENST00000634451 S100PP25815 95 aa7.03□□□□□ -1.28
LINC00339-206ENST00000634451 MEIG1Q5JSS6 88 aa7.03□□□□□ -1.28
LINC00339-206ENST00000634451 NDUFA12Q9UI09 145 aa7.03□□□□□ -1.28
LINC00339-206ENST00000634451 SLC25A20O43772 301 aa7.02□□□□□ -1.29
LINC00339-206ENST00000634451 TSPEAR-AS2P59090 65 aa7.01□□□□□ -1.29
LINC00339-206ENST00000634451 KRTAP10-6P60371 365 aaPredicted RBP7.01□□□□□ -1.29
LINC00339-206ENST00000634451 RPS29P62273 56 aaKnown RBP7.01□□□□□ -1.29
LINC00339-206ENST00000634451 CLLU1Q5K131 121 aa7.01□□□□□ -1.29
LINC00339-206ENST00000634451 SFTA2Q6UW10 78 aa7.01□□□□□ -1.29
LINC00339-206ENST00000634451 ST20-AS1Q8NBB2 130 aa7.01□□□□□ -1.29
LINC00339-206ENST00000634451 IGLV8-61A0A075B6I0 122 aa7□□□□□ -1.29
LINC00339-206ENST00000634451 C9orf92A6NGG3 77 aa7□□□□□ -1.29
LINC00339-206ENST00000634451 ATP6V1G1O75348 118 aa7□□□□□ -1.29
LINC00339-206ENST00000634451 C9orf153Q5TBE3 101 aa7□□□□□ -1.29
LINC00339-206ENST00000634451 SSBP3-AS1Q7Z2R9 100 aa7□□□□□ -1.29
LINC00339-206ENST00000634451 FAM19A2Q8N3H0 131 aa7□□□□□ -1.29
LINC00339-206ENST00000634451 SEC11CQ9BY50 192 aa7□□□□□ -1.29
LINC00339-206ENST00000634451 Q6ZRX8 168 aa6.99□□□□□ -1.29
LINC00339-206ENST00000634451 RPS10P5Q9NQ39 176 aa6.99□□□□□ -1.29
LINC00339-206ENST00000634451 TRAPPC1Q9Y5R8 145 aa6.99□□□□□ -1.29
LINC00339-206ENST00000634451 DDTP30046 118 aa6.98□□□□□ -1.29
LINC00339-206ENST00000634451 COX19Q49B96 90 aa6.98□□□□□ -1.29
LINC00339-206ENST00000634451 EIF4EBP3O60516 100 aaPredicted RBP6.97□□□□□ -1.29
LINC00339-206ENST00000634451 IFITM2Q01629 132 aa6.97□□□□□ -1.29
LINC00339-206ENST00000634451 HRCT1Q6UXD1 115 aa6.97□□□□□ -1.29
LINC00339-206ENST00000634451 UQCC3Q6UW78 93 aa6.96□□□□□ -1.3
LINC00339-206ENST00000634451 IFI27L1Q96BM0 104 aa6.96□□□□□ -1.3
LINC00339-206ENST00000634451 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
LINC00339-206ENST00000634451 TRAV12-1A0A0B4J245 112 aa6.94□□□□□ -1.3
LINC00339-206ENST00000634451 HERV-K104P63124 156 aa6.94□□□□□ -1.3
LINC00339-206ENST00000634451 H0Y8G0 127 aa6.93□□□□□ -1.3
LINC00339-206ENST00000634451 CFC1BP0CG36 223 aa6.93□□□□□ -1.3
LINC00339-206ENST00000634451 SOSTDC1Q6X4U4 206 aa6.93□□□□□ -1.3
LINC00339-206ENST00000634451 COMMD7Q86VX2 200 aa6.93□□□□□ -1.3
LINC00339-206ENST00000634451 LOC107984156A0A0G2JMH3 177 aa6.92□□□□□ -1.3
LINC00339-206ENST00000634451 IGLV6-57P01721 117 aa6.92□□□□□ -1.3
LINC00339-206ENST00000634451 NPC2P61916 151 aa6.92□□□□□ -1.3
LINC00339-206ENST00000634451 C10orf91Q5T1B1 145 aa6.92□□□□□ -1.3
LINC00339-206ENST00000634451 ARL17AQ8IVW1 177 aa6.92□□□□□ -1.3
LINC00339-206ENST00000634451 TRBV10-2A0A0K0K1G8 114 aa6.91□□□□□ -1.3
LINC00339-206ENST00000634451 MYMXA0A1B0GTQ4 84 aa6.91□□□□□ -1.3
LINC00339-206ENST00000634451 RHEBQ15382 184 aa6.91□□□□□ -1.3
LINC00339-206ENST00000634451 TRAV23DV6A0A075B6W5 121 aa6.9□□□□□ -1.3
LINC00339-206ENST00000634451 SPANXB1Q9NS25 103 aaPredicted RBP6.9□□□□□ -1.3
LINC00339-206ENST00000634451 S100A12P80511 92 aa6.89□□□□□ -1.31
LINC00339-206ENST00000634451 S100A7L2Q5SY68 101 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms