RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 KRTAP10-8P60410 259 aa6.72□□□□□ -1.33
DDX41-219ENST00000629036 LINC00167Q96N53 147 aa6.72□□□□□ -1.33
DDX41-219ENST00000629036 SYS1-DBNDD2H3BUS1 97 aa6.71□□□□□ -1.34
DDX41-219ENST00000629036 KRTAP1-4P0C5Y4 121 aa6.71□□□□□ -1.34
DDX41-219ENST00000629036 LINC01545Q5VT33 79 aa6.71□□□□□ -1.34
DDX41-219ENST00000629036 KRTAP13-1Q8IUC0 172 aa6.71□□□□□ -1.34
DDX41-219ENST00000629036 H0Y9J4 135 aa6.7□□□□□ -1.34
DDX41-219ENST00000629036 LEPROTO15243 131 aa6.7□□□□□ -1.34
DDX41-219ENST00000629036 IGKCP01834 107 aa6.7□□□□□ -1.34
DDX41-219ENST00000629036 UBE2BP63146 152 aa6.7□□□□□ -1.34
DDX41-219ENST00000629036 MAP1LC3CQ9BXW4 147 aa6.7□□□□□ -1.34
DDX41-219ENST00000629036 NDUFA12Q9UI09 145 aa6.7□□□□□ -1.34
DDX41-219ENST00000629036 SMIM13P0DJ93 91 aa6.69□□□□□ -1.34
DDX41-219ENST00000629036 S100A1P23297 94 aa6.69□□□□□ -1.34
DDX41-219ENST00000629036 LBHQ53QV2 105 aaPredicted RBP6.69□□□□□ -1.34
DDX41-219ENST00000629036 GAGE10A6NGK3 116 aa6.68□□□□□ -1.34
DDX41-219ENST00000629036 RPL37AP8A6NKH3 93 aa6.68□□□□□ -1.34
DDX41-219ENST00000629036 C3orf79P0CE67 100 aa6.68□□□□□ -1.34
DDX41-219ENST00000629036 KRTAP9-2Q9BYQ4 174 aa6.68□□□□□ -1.34
DDX41-219ENST00000629036 E9PLD3 99 aa6.67□□□□□ -1.34
DDX41-219ENST00000629036 J3QQQ9 107 aa6.67□□□□□ -1.34
DDX41-219ENST00000629036 HERV-K104P63124 156 aa6.67□□□□□ -1.34
DDX41-219ENST00000629036 REG3GQ6UW15 175 aa6.67□□□□□ -1.34
DDX41-219ENST00000629036 DIRC1Q969H9 104 aa6.67□□□□□ -1.34
DDX41-219ENST00000629036 PLEKHB2Q96CS7 222 aa6.67□□□□□ -1.34
DDX41-219ENST00000629036 IGLV1-50A0A075B6I6 118 aa6.66□□□□□ -1.34
DDX41-219ENST00000629036 LOC107984156A0A0G2JMH3 177 aa6.66□□□□□ -1.34
DDX41-219ENST00000629036 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
DDX41-219ENST00000629036 ZNF861PO60384 105 aa6.66□□□□□ -1.34
DDX41-219ENST00000629036 BCE1O60756 84 aa6.66□□□□□ -1.34
DDX41-219ENST00000629036 LINC00158P58513 81 aa6.66□□□□□ -1.34
DDX41-219ENST00000629036 PET117Q6UWS5 81 aa6.66□□□□□ -1.34
DDX41-219ENST00000629036 ARL17AQ8IVW1 177 aa6.66□□□□□ -1.34
DDX41-219ENST00000629036 MIR7-3HGQ8N6C7 128 aa6.66□□□□□ -1.34
DDX41-219ENST00000629036 IGKV2D-26A0A0A0MRZ7 120 aa6.65□□□□□ -1.34
DDX41-219ENST00000629036 MYMXA0A1B0GTQ4 84 aa6.65□□□□□ -1.34
DDX41-219ENST00000629036 EIF4EBP3O60516 100 aaPredicted RBP6.65□□□□□ -1.34
DDX41-219ENST00000629036 NKAPP1Q8N9T2 125 aa6.65□□□□□ -1.34
DDX41-219ENST00000629036 IGKV2-28A0A075B6P5 120 aa6.64□□□□□ -1.35
DDX41-219ENST00000629036 TMEM238C9JI98 176 aa6.64□□□□□ -1.35
DDX41-219ENST00000629036 M0R378 163 aa6.64□□□□□ -1.35
DDX41-219ENST00000629036 IGKV2D-28P01615 120 aa6.64□□□□□ -1.35
DDX41-219ENST00000629036 NMUP48645 174 aa6.64□□□□□ -1.35
DDX41-219ENST00000629036 HERVK_113P61574 105 aa6.64□□□□□ -1.35
DDX41-219ENST00000629036 DAND5Q8N907 189 aa6.64□□□□□ -1.35
DDX41-219ENST00000629036 LITAFQ99732 161 aa6.64□□□□□ -1.35
DDX41-219ENST00000629036 RPL24P83731 157 aaKnown RBP6.63□□□□□ -1.35
DDX41-219ENST00000629036 MEIG1Q5JSS6 88 aa6.63□□□□□ -1.35
DDX41-219ENST00000629036 SOSTDC1Q6X4U4 206 aa6.63□□□□□ -1.35
DDX41-219ENST00000629036 HIST3H2BBQ8N257 126 aa6.63□□□□□ -1.35
DDX41-219ENST00000629036 A0A0J9YXY3 114 aa6.62□□□□□ -1.35
DDX41-219ENST00000629036 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
DDX41-219ENST00000629036 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
DDX41-219ENST00000629036 PRR26Q8N8Z3 221 aa6.62□□□□□ -1.35
DDX41-219ENST00000629036 TMEM126AQ9H061 195 aa6.62□□□□□ -1.35
DDX41-219ENST00000629036 KRTAP4-16G5E9R7 235 aaPredicted RBP6.61□□□□□ -1.35
DDX41-219ENST00000629036 LGALS3P17931 250 aaKnown RBP6.61□□□□□ -1.35
DDX41-219ENST00000629036 KRTDAPP60985 99 aa6.61□□□□□ -1.35
DDX41-219ENST00000629036 BOD1L2Q8IYS8 172 aa6.61□□□□□ -1.35
DDX41-219ENST00000629036 TTTY13Q9BZ97 58 aa6.61□□□□□ -1.35
DDX41-219ENST00000629036 LINC00587B1AMM8 73 aa6.6□□□□□ -1.35
DDX41-219ENST00000629036 SPRR1AP35321 89 aa6.6□□□□□ -1.35
DDX41-219ENST00000629036 RPL28P46779 137 aaKnown RBP6.6□□□□□ -1.35
DDX41-219ENST00000629036 ANKRD39Q53RE8 183 aa6.6□□□□□ -1.35
DDX41-219ENST00000629036 HIST1H2BLQ99880 126 aa6.6□□□□□ -1.35
DDX41-219ENST00000629036 A0A087X002 238 aa6.59□□□□□ -1.35
DDX41-219ENST00000629036 NCR3O14931 201 aa6.59□□□□□ -1.35
DDX41-219ENST00000629036 PRLHP81277 87 aa6.59□□□□□ -1.35
DDX41-219ENST00000629036 KCNQ1DNQ9H478 68 aa6.58□□□□□ -1.36
DDX41-219ENST00000629036 TRBV10-3A0A0K0K1G6 114 aa6.57□□□□□ -1.36
DDX41-219ENST00000629036 PRYO14603 147 aa6.57□□□□□ -1.36
DDX41-219ENST00000629036 TIMM17BO60830 172 aa6.57□□□□□ -1.36
DDX41-219ENST00000629036 TRBV10-2A0A0K0K1G8 114 aa6.56□□□□□ -1.36
DDX41-219ENST00000629036 NDUFC2O95298 119 aa6.56□□□□□ -1.36
DDX41-219ENST00000629036 KRTAP13-2Q52LG2 175 aa6.56□□□□□ -1.36
DDX41-219ENST00000629036 ATOH7Q8N100 152 aa6.56□□□□□ -1.36
DDX41-219ENST00000629036 ZNF815PA8K554 130 aa6.55□□□□□ -1.36
DDX41-219ENST00000629036 IGLV6-57P01721 117 aa6.55□□□□□ -1.36
DDX41-219ENST00000629036 UBE2AP49459 152 aa6.55□□□□□ -1.36
DDX41-219ENST00000629036 FAM19A1Q7Z5A9 133 aa6.55□□□□□ -1.36
DDX41-219ENST00000629036 LINC00337Q8N6G1 96 aa6.55□□□□□ -1.36
DDX41-219ENST00000629036 SPANXB1Q9NS25 103 aaPredicted RBP6.55□□□□□ -1.36
DDX41-219ENST00000629036 LPAP08519 4548 aa6.55□□□□□ -1.36
DDX41-219ENST00000629036 FAT4Q6V0I7 4981 aa6.54□□□□□ -1.36
DDX41-219ENST00000629036 LINC00308Q8TCZ7 52 aa6.54□□□□□ -1.36
DDX41-219ENST00000629036 ANAPC11Q9NYG5 84 aa6.54□□□□□ -1.36
DDX41-219ENST00000629036 C20orf202A1L168 122 aa6.53□□□□□ -1.36
DDX41-219ENST00000629036 C5orf52A6NGY3 159 aa6.53□□□□□ -1.36
DDX41-219ENST00000629036 NPC2P61916 151 aa6.53□□□□□ -1.36
DDX41-219ENST00000629036 PCP2Q8IVA1 136 aa6.53□□□□□ -1.36
DDX41-219ENST00000629036 RPL13AP40429 203 aaKnown RBP6.52□□□□□ -1.37
DDX41-219ENST00000629036 SNRPEP62304 92 aaKnown RBP6.52□□□□□ -1.37
DDX41-219ENST00000629036 FAM229BQ4G0N7 80 aa6.52□□□□□ -1.37
DDX41-219ENST00000629036 SMCR5Q8TEV8 140 aa6.52□□□□□ -1.37
DDX41-219ENST00000629036 SPANXDQ9BXN6 97 aa6.52□□□□□ -1.37
DDX41-219ENST00000629036 SPANXCQ9NY87 97 aa6.52□□□□□ -1.37
DDX41-219ENST00000629036 B5MCH6 92 aa6.51□□□□□ -1.37
DDX41-219ENST00000629036 DDTP30046 118 aa6.51□□□□□ -1.37
DDX41-219ENST00000629036 SPRR4Q96PI1 79 aa6.5□□□□□ -1.37
DDX41-219ENST00000629036 Q9BRP9 147 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms