RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 NDUFV3P56181 108 aaKnown RBP13.11□□□□□ -0.31
CHRNA4-209ENST00000627000 Q8NDZ9 215 aa13.11□□□□□ -0.31
CHRNA4-209ENST00000627000 FAM218AQ96MZ4 157 aa13.11□□□□□ -0.31
CHRNA4-209ENST00000627000 FAM240AA0A1B0GVK7 77 aa13.1□□□□□ -0.31
CHRNA4-209ENST00000627000 DNAH10OSP0CZ25 163 aa13.1□□□□□ -0.31
CHRNA4-209ENST00000627000 C6orf48Q9UBA6 75 aa13.1□□□□□ -0.31
CHRNA4-209ENST00000627000 C1orf43Q9BWL3 253 aa13.09□□□□□ -0.31
CHRNA4-209ENST00000627000 DNAH9Q9NYC9 4486 aa13.09□□□□□ -0.31
CHRNA4-209ENST00000627000 IGKV2D-24A0A075B6R9 120 aa13.08□□□□□ -0.31
CHRNA4-209ENST00000627000 TEX49A0A1B0GTD5 131 aa13.08□□□□□ -0.31
CHRNA4-209ENST00000627000 C15orf56Q8N910 161 aa13.08□□□□□ -0.31
CHRNA4-209ENST00000627000 Q9HAA7 133 aa13.08□□□□□ -0.32
CHRNA4-209ENST00000627000 ZNF561-AS1K7EIQ3 104 aa13.07□□□□□ -0.32
CHRNA4-209ENST00000627000 COL7A1Q02388 2944 aa13.06□□□□□ -0.32
CHRNA4-209ENST00000627000 GVQW2A0A096LPI5 108 aaPredicted RBP13.05□□□□□ -0.32
CHRNA4-209ENST00000627000 NDUFC2O95298 119 aa13.05□□□□□ -0.32
CHRNA4-209ENST00000627000 NCR3O14931 201 aa13.04□□□□□ -0.32
CHRNA4-209ENST00000627000 NHLRC4P0CG21 123 aaPredicted RBP13.04□□□□□ -0.32
CHRNA4-209ENST00000627000 CAMK2N2Q96S95 79 aa13.04□□□□□ -0.32
CHRNA4-209ENST00000627000 TRACP01848 142 aa13.02□□□□□ -0.33
CHRNA4-209ENST00000627000 Q6ZRU5 148 aa13.02□□□□□ -0.33
CHRNA4-209ENST00000627000 B5MCH6 92 aa13.01□□□□□ -0.33
CHRNA4-209ENST00000627000 ACYP1P07311 99 aa13.01□□□□□ -0.33
CHRNA4-209ENST00000627000 A0A087WYN8 130 aa13.01□□□□□ -0.33
CHRNA4-209ENST00000627000 XAGE1AQ9HD64 81 aa13□□□□□ -0.33
CHRNA4-209ENST00000627000 SS18L2Q9UHA2 77 aa13□□□□□ -0.33
CHRNA4-209ENST00000627000 MUC7Q8TAX7 377 aa13□□□□□ -0.33
CHRNA4-209ENST00000627000 STAB2Q8WWQ8 2551 aa12.99□□□□□ -0.33
CHRNA4-209ENST00000627000 B9D2Q9BPU9 175 aa12.98□□□□□ -0.33
CHRNA4-209ENST00000627000 DNAH1Q9P2D7 4330 aa12.98□□□□□ -0.33
CHRNA4-209ENST00000627000 H0YGX0 51 aa12.97□□□□□ -0.33
CHRNA4-209ENST00000627000 C2orf48Q96LS8 159 aa12.97□□□□□ -0.33
CHRNA4-209ENST00000627000 TMEM126AQ9H061 195 aa12.97□□□□□ -0.33
CHRNA4-209ENST00000627000 CASC10Q5T4H9 136 aa12.97□□□□□ -0.33
CHRNA4-209ENST00000627000 TRBV7-7A0A0K0K1E9 115 aa12.95□□□□□ -0.34
CHRNA4-209ENST00000627000 BAALC-AS2P0C853 105 aa12.95□□□□□ -0.34
CHRNA4-209ENST00000627000 RPL18AQ02543 176 aaKnown RBP12.95□□□□□ -0.34
CHRNA4-209ENST00000627000 UPK3BQ9BT76 320 aa12.95□□□□□ -0.34
CHRNA4-209ENST00000627000 S100A7L2Q5SY68 101 aa12.94□□□□□ -0.34
CHRNA4-209ENST00000627000 IMUPQ9GZP8 106 aa12.94□□□□□ -0.34
CHRNA4-209ENST00000627000 C22orf24Q9Y442 160 aa12.94□□□□□ -0.34
CHRNA4-209ENST00000627000 LECT2O14960 151 aa12.93□□□□□ -0.34
CHRNA4-209ENST00000627000 CCDC179H3BU77 68 aa12.93□□□□□ -0.34
CHRNA4-209ENST00000627000 LYSTQ99698 3801 aa12.91□□□□□ -0.34
CHRNA4-209ENST00000627000 SYCNQ0VAF6 134 aa12.91□□□□□ -0.34
CHRNA4-209ENST00000627000 NDUFC2-KCTD14E9PQ53 114 aa12.9□□□□□ -0.34
CHRNA4-209ENST00000627000 DNAL4O96015 105 aa12.9□□□□□ -0.34
CHRNA4-209ENST00000627000 C6orf99Q4VX62 202 aa12.9□□□□□ -0.34
CHRNA4-209ENST00000627000 Q6ZRP5 223 aa12.9□□□□□ -0.34
CHRNA4-209ENST00000627000 USP17L23D6RBM5 183 aa12.89□□□□□ -0.35
CHRNA4-209ENST00000627000 SLPIP03973 132 aa12.89□□□□□ -0.35
CHRNA4-209ENST00000627000 APLNQ9ULZ1 77 aa12.89□□□□□ -0.35
CHRNA4-209ENST00000627000 IGLV6-57P01721 117 aa12.88□□□□□ -0.35
CHRNA4-209ENST00000627000 TRBV10-3A0A0K0K1G6 114 aa12.87□□□□□ -0.35
CHRNA4-209ENST00000627000 VPREB1P12018 145 aa12.87□□□□□ -0.35
CHRNA4-209ENST00000627000 KRTAP1-5Q9BYS1 174 aa12.87□□□□□ -0.35
CHRNA4-209ENST00000627000 F8WDY8 70 aa12.86□□□□□ -0.35
CHRNA4-209ENST00000627000 LINC00643Q86TS7 51 aa12.86□□□□□ -0.35
CHRNA4-209ENST00000627000 INAFM2P0DMQ5 153 aa12.85□□□□□ -0.35
CHRNA4-209ENST00000627000 RMI2Q96E14 147 aa12.85□□□□□ -0.35
CHRNA4-209ENST00000627000 DYNC2H1Q8NCM8 4307 aaKnown RBP12.85□□□□□ -0.35
CHRNA4-209ENST00000627000 CSMD3Q7Z407 3707 aa12.83□□□□□ -0.36
CHRNA4-209ENST00000627000 C9orf129Q5T035 196 aaKnown RBP12.83□□□□□ -0.36
CHRNA4-209ENST00000627000 Q8N814 137 aa12.83□□□□□ -0.36
CHRNA4-209ENST00000627000 DNHD1Q96M86 4753 aa12.83□□□□□ -0.36
CHRNA4-209ENST00000627000 UBE2DNLQ8IWF7 75 aa12.83□□□□□ -0.36
CHRNA4-209ENST00000627000 TRAV23DV6A0A075B6W5 121 aa12.8□□□□□ -0.36
CHRNA4-209ENST00000627000 LINC00167Q96N53 147 aa12.8□□□□□ -0.36
CHRNA4-209ENST00000627000 DNAH10Q8IVF4 4471 aa12.8□□□□□ -0.36
CHRNA4-209ENST00000627000 PRKDCP78527 4128 aaKnown RBP12.8□□□□□ -0.36
CHRNA4-209ENST00000627000 PLECQ15149 4684 aaKnown RBP12.79□□□□□ -0.36
CHRNA4-209ENST00000627000 A0A1B0GX51 115 aa12.79□□□□□ -0.36
CHRNA4-209ENST00000627000 LINC00575Q6W349 94 aa12.79□□□□□ -0.36
CHRNA4-209ENST00000627000 ORMDL1Q9P0S3 153 aa12.79□□□□□ -0.36
CHRNA4-209ENST00000627000 FAM236AA0A1B0GUQ0 79 aa12.79□□□□□ -0.36
CHRNA4-209ENST00000627000 FAM236BA0A1B0GV22 79 aa12.79□□□□□ -0.36
CHRNA4-209ENST00000627000 M0R378 163 aa12.78□□□□□ -0.36
CHRNA4-209ENST00000627000 DNAH7Q8WXX0 4024 aa12.77□□□□□ -0.37
CHRNA4-209ENST00000627000 SERTAD4-AS1Q5TG53 156 aa12.76□□□□□ -0.37
CHRNA4-209ENST00000627000 SDIM1Q6ZPB5 146 aa12.76□□□□□ -0.37
CHRNA4-209ENST00000627000 TLX1NBP0CAT3 122 aa12.76□□□□□ -0.37
CHRNA4-209ENST00000627000 ZNF73O43830 326 aaPredicted RBP12.75□□□□□ -0.37
CHRNA4-209ENST00000627000 DIRC1Q969H9 104 aa12.75□□□□□ -0.37
CHRNA4-209ENST00000627000 SMIM20Q8N5G0 67 aa12.74□□□□□ -0.37
CHRNA4-209ENST00000627000 hADV29S1A0JD25 119 aa12.73□□□□□ -0.37
CHRNA4-209ENST00000627000 NUPR2A6NF83 97 aa12.73□□□□□ -0.37
CHRNA4-209ENST00000627000 TENM2Q9NT68 2774 aa12.73□□□□□ -0.37
CHRNA4-209ENST00000627000 OBSCN-AS1Q96MR7 158 aa12.72□□□□□ -0.37
CHRNA4-209ENST00000627000 C14orf132Q9NPU4 83 aa12.72□□□□□ -0.37
CHRNA4-209ENST00000627000 UQCRQO14949 82 aa12.71□□□□□ -0.37
CHRNA4-209ENST00000627000 C3orf22Q8N5N4 141 aa12.71□□□□□ -0.37
CHRNA4-209ENST00000627000 FAM168BA1KXE4 195 aa12.71□□□□□ -0.37
CHRNA4-209ENST00000627000 SMCR5Q8TEV8 140 aa12.71□□□□□ -0.37
CHRNA4-209ENST00000627000 STARD9Q9P2P6 4700 aa12.71□□□□□ -0.38
CHRNA4-209ENST00000627000 C9orf153Q5TBE3 101 aa12.7□□□□□ -0.38
CHRNA4-209ENST00000627000 GAGE2AQ6NT46 116 aa12.7□□□□□ -0.38
CHRNA4-209ENST00000627000 NKAPP1Q8N9T2 125 aa12.7□□□□□ -0.38
CHRNA4-209ENST00000627000 PSCAO43653 123 aa12.69□□□□□ -0.38
CHRNA4-209ENST00000627000 COX7BP24311 80 aa12.69□□□□□ -0.38
CHRNA4-209ENST00000627000 MEGF8Q7Z7M0 2845 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms