RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 CBLN2Q8IUK8 224 aa6.43□□□□□ -1.38
SSBP4-215ENST00000625926 KRTAP13-1Q8IUC0 172 aa6.42□□□□□ -1.38
SSBP4-215ENST00000625926 FAM19A2Q8N3H0 131 aa6.42□□□□□ -1.38
SSBP4-215ENST00000625926 A0A087X002 238 aa6.41□□□□□ -1.38
SSBP4-215ENST00000625926 TRGC2P03986 189 aa6.41□□□□□ -1.38
SSBP4-215ENST00000625926 TYMSOSQ8TAI1 123 aa6.41□□□□□ -1.38
SSBP4-215ENST00000625926 TMEM126AQ9H061 195 aa6.41□□□□□ -1.38
SSBP4-215ENST00000625926 A0A0U1RRA0 63 aa6.4□□□□□ -1.38
SSBP4-215ENST00000625926 TMEM238C9JI98 176 aa6.4□□□□□ -1.38
SSBP4-215ENST00000625926 PRLHP81277 87 aa6.4□□□□□ -1.38
SSBP4-215ENST00000625926 FAM19A1Q7Z5A9 133 aa6.4□□□□□ -1.38
SSBP4-215ENST00000625926 Q8NDZ9 215 aa6.4□□□□□ -1.38
SSBP4-215ENST00000625926 ANAPC11Q9NYG5 84 aa6.4□□□□□ -1.38
SSBP4-215ENST00000625926 LINC00587B1AMM8 73 aa6.39□□□□□ -1.39
SSBP4-215ENST00000625926 M0R378 163 aa6.39□□□□□ -1.39
SSBP4-215ENST00000625926 LEPROTL1O95214 131 aa6.39□□□□□ -1.39
SSBP4-215ENST00000625926 TSPAN13O95857 204 aa6.39□□□□□ -1.39
SSBP4-215ENST00000625926 HERV-K104P63124 156 aa6.39□□□□□ -1.39
SSBP4-215ENST00000625926 PRR4Q16378 134 aa6.39□□□□□ -1.39
SSBP4-215ENST00000625926 FAM229BQ4G0N7 80 aa6.39□□□□□ -1.39
SSBP4-215ENST00000625926 MEIG1Q5JSS6 88 aa6.39□□□□□ -1.39
SSBP4-215ENST00000625926 SLC7A5P1Q8MH63 180 aa6.39□□□□□ -1.39
SSBP4-215ENST00000625926 H0Y8G0 127 aa6.38□□□□□ -1.39
SSBP4-215ENST00000625926 SMIM13P0DJ93 91 aa6.38□□□□□ -1.39
SSBP4-215ENST00000625926 MYMXA0A1B0GTQ4 84 aa6.37□□□□□ -1.39
SSBP4-215ENST00000625926 SERF1AO75920 110 aa6.37□□□□□ -1.39
SSBP4-215ENST00000625926 NDUFA12Q9UI09 145 aa6.37□□□□□ -1.39
SSBP4-215ENST00000625926 LINC00310P59036 64 aa6.36□□□□□ -1.39
SSBP4-215ENST00000625926 KRTAP13-2Q52LG2 175 aa6.36□□□□□ -1.39
SSBP4-215ENST00000625926 BOD1L2Q8IYS8 172 aa6.36□□□□□ -1.39
SSBP4-215ENST00000625926 MIR7-3HGQ8N6C7 128 aa6.36□□□□□ -1.39
SSBP4-215ENST00000625926 MAP1LC3CQ9BXW4 147 aa6.36□□□□□ -1.39
SSBP4-215ENST00000625926 HSPB8Q9UJY1 196 aa6.36□□□□□ -1.39
SSBP4-215ENST00000625926 IGKV2D-26A0A0A0MRZ7 120 aa6.35□□□□□ -1.39
SSBP4-215ENST00000625926 PLNP26678 52 aa6.35□□□□□ -1.39
SSBP4-215ENST00000625926 CTAG1AP78358 180 aa6.35□□□□□ -1.39
SSBP4-215ENST00000625926 PLEKHB2Q96CS7 222 aa6.35□□□□□ -1.39
SSBP4-215ENST00000625926 COLCA2A8K830 154 aa6.34□□□□□ -1.39
SSBP4-215ENST00000625926 LEPROTO15243 131 aa6.34□□□□□ -1.39
SSBP4-215ENST00000625926 FABP4P15090 132 aa6.34□□□□□ -1.39
SSBP4-215ENST00000625926 HIGD2AQ9BW72 106 aa6.34□□□□□ -1.39
SSBP4-215ENST00000625926 FSIP2Q5CZC0 6907 aa6.33□□□□□ -1.4
SSBP4-215ENST00000625926 DPM2O94777 84 aa6.33□□□□□ -1.4
SSBP4-215ENST00000625926 HERVK_113P61574 105 aa6.33□□□□□ -1.4
SSBP4-215ENST00000625926 LINC00304Q8N9R0 145 aa6.33□□□□□ -1.4
SSBP4-215ENST00000625926 J3QQQ9 107 aa6.32□□□□□ -1.4
SSBP4-215ENST00000625926 PRYO14603 147 aa6.32□□□□□ -1.4
SSBP4-215ENST00000625926 NCR3O14931 201 aa6.32□□□□□ -1.4
SSBP4-215ENST00000625926 TSPEAR-AS2P59090 65 aa6.32□□□□□ -1.4
SSBP4-215ENST00000625926 KCNQ1DNQ9H478 68 aa6.32□□□□□ -1.4
SSBP4-215ENST00000625926 IGKCP01834 107 aa6.31□□□□□ -1.4
SSBP4-215ENST00000625926 NMUP48645 174 aa6.31□□□□□ -1.4
SSBP4-215ENST00000625926 S100A12P80511 92 aa6.31□□□□□ -1.4
SSBP4-215ENST00000625926 LINC00337Q8N6G1 96 aa6.31□□□□□ -1.4
SSBP4-215ENST00000625926 PMCHL2Q9BQD1 86 aa6.31□□□□□ -1.4
SSBP4-215ENST00000625926 ZNF706Q9Y5V0 76 aaPredicted RBP6.31□□□□□ -1.4
SSBP4-215ENST00000625926 LOC107984156A0A0G2JMH3 177 aa6.3□□□□□ -1.4
SSBP4-215ENST00000625926 TRBV10-3A0A0K0K1G6 114 aa6.3□□□□□ -1.4
SSBP4-215ENST00000625926 LGALS3P17931 250 aaKnown RBP6.3□□□□□ -1.4
SSBP4-215ENST00000625926 SPRR1AP35321 89 aa6.3□□□□□ -1.4
SSBP4-215ENST00000625926 ARL17AQ8IVW1 177 aa6.3□□□□□ -1.4
SSBP4-215ENST00000625926 SPRR4Q96PI1 79 aa6.3□□□□□ -1.4
SSBP4-215ENST00000625926 ETDCA0A1B0GVM5 59 aa6.29□□□□□ -1.4
SSBP4-215ENST00000625926 DAND5Q8N907 189 aa6.29□□□□□ -1.4
SSBP4-215ENST00000625926 TRBV10-2A0A0K0K1G8 114 aa6.28□□□□□ -1.4
SSBP4-215ENST00000625926 LOC105371267A0A1B0GV96 52 aa6.28□□□□□ -1.4
SSBP4-215ENST00000625926 KRTAP4-16G5E9R7 235 aaPredicted RBP6.28□□□□□ -1.4
SSBP4-215ENST00000625926 C3orf22Q8N5N4 141 aa6.28□□□□□ -1.4
SSBP4-215ENST00000625926 SMCR5Q8TEV8 140 aa6.28□□□□□ -1.4
SSBP4-215ENST00000625926 MIEN1Q9BRT3 115 aa6.28□□□□□ -1.4
SSBP4-215ENST00000625926 DDTP30046 118 aa6.27□□□□□ -1.41
SSBP4-215ENST00000625926 SPAG11AQ6PDA7 123 aa6.27□□□□□ -1.41
SSBP4-215ENST00000625926 RETNLBQ9BQ08 111 aa6.27□□□□□ -1.41
SSBP4-215ENST00000625926 CRCT1Q9UGL9 99 aa6.27□□□□□ -1.41
SSBP4-215ENST00000625926 LPAP08519 4548 aa6.27□□□□□ -1.41
SSBP4-215ENST00000625926 E9PLD3 99 aa6.26□□□□□ -1.41
SSBP4-215ENST00000625926 NDUFC2O95298 119 aa6.26□□□□□ -1.41
SSBP4-215ENST00000625926 SPANXB1Q9NS25 103 aaPredicted RBP6.26□□□□□ -1.41
SSBP4-215ENST00000625926 B5MCH6 92 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 SYS1-DBNDD2H3BUS1 97 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 HIST1H2BKO60814 126 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 HIST1H2BJP06899 126 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 HIST1H2BOP23527 126 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 HIST1H2BBP33778 126 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 HIST1H2BDP58876 126 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 HIST1H2BCP62807 126 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 HIST2H2BEQ16778 126 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 C4orf48Q5BLP8 95 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.25□□□□□ -1.41
SSBP4-215ENST00000625926 S100A7L2Q5SY68 101 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 HIST1H2BHQ93079 126 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 HIST1H2BNQ99877 126 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 HIST1H2BMQ99879 126 aa6.25□□□□□ -1.41
SSBP4-215ENST00000625926 A0A0J9YXY3 114 aa6.24□□□□□ -1.41
SSBP4-215ENST00000625926 ADAMTSL4-AS1Q5T5F5 129 aa6.24□□□□□ -1.41
SSBP4-215ENST00000625926 PPDPFQ9H3Y8 114 aa6.24□□□□□ -1.41
SSBP4-215ENST00000625926 IGLV7-46A0A075B6I9 117 aa6.23□□□□□ -1.41
SSBP4-215ENST00000625926 IGLV6-57P01721 117 aa6.23□□□□□ -1.41
SSBP4-215ENST00000625926 GAGE2AQ6NT46 116 aa6.23□□□□□ -1.41
SSBP4-215ENST00000625926 NPC2P61916 151 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms