RNA–Protein interactions for RNA: ENST00000625681.2

UBE3A-208, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-208	ENST00000625681	PYY3	Q5JQD4	70 aa		13.64	□□□□□ -0.23
UBE3A-208	ENST00000625681	DIRC1	Q969H9	104 aa		13.64	□□□□□ -0.23
UBE3A-208	ENST00000625681	LOC105371267	A0A1B0GV96	52 aa		13.63	□□□□□ -0.23
UBE3A-208	ENST00000625681	IGLV7-43	P04211	117 aa		13.63	□□□□□ -0.23
UBE3A-208	ENST00000625681	CAMK2N2	Q96S95	79 aa		13.63	□□□□□ -0.23
UBE3A-208	ENST00000625681	NDUFA1	O15239	70 aa		13.62	□□□□□ -0.23
UBE3A-208	ENST00000625681	SFTA2	Q6UW10	78 aa		13.62	□□□□□ -0.23
UBE3A-208	ENST00000625681	FAT4	Q6V0I7	4981 aa		13.62	□□□□□ -0.23
UBE3A-208	ENST00000625681		J3QQQ9	107 aa		13.61	□□□□□ -0.23
UBE3A-208	ENST00000625681	KRTAP11-1	Q8IUC1	163 aa		13.61	□□□□□ -0.23
UBE3A-208	ENST00000625681	LGALS3	P17931	250 aa	Known RBP	13.6	□□□□□ -0.23
UBE3A-208	ENST00000625681	ANKRD39	Q53RE8	183 aa		13.59	□□□□□ -0.23
UBE3A-208	ENST00000625681		H0Y9J4	135 aa		13.58	□□□□□ -0.24
UBE3A-208	ENST00000625681	TSPEAR-AS2	P59090	65 aa		13.58	□□□□□ -0.24
UBE3A-208	ENST00000625681	C2orf82	Q6UX34	121 aa		13.58	□□□□□ -0.24
UBE3A-208	ENST00000625681	VAMP8	Q9BV40	100 aa		13.58	□□□□□ -0.24
UBE3A-208	ENST00000625681		A0A0U1RQV1	116 aa		13.57	□□□□□ -0.24
UBE3A-208	ENST00000625681	NMU	P48645	174 aa		13.57	□□□□□ -0.24
UBE3A-208	ENST00000625681	NDUFA12	Q9UI09	145 aa		13.57	□□□□□ -0.24
UBE3A-208	ENST00000625681	IGKV2D-26	A0A0A0MRZ7	120 aa		13.56	□□□□□ -0.24
UBE3A-208	ENST00000625681	TRBV30	A0A0K0K1B3	111 aa		13.56	□□□□□ -0.24
UBE3A-208	ENST00000625681	FAM168B	A1KXE4	195 aa		13.56	□□□□□ -0.24
UBE3A-208	ENST00000625681	UNQ6190/PRO20217	Q6UXQ8	127 aa		13.56	□□□□□ -0.24
UBE3A-208	ENST00000625681	MYMX	A0A1B0GTQ4	84 aa		13.55	□□□□□ -0.24
UBE3A-208	ENST00000625681	KRTAP1-4	P0C5Y4	121 aa		13.55	□□□□□ -0.24
UBE3A-208	ENST00000625681	SMIM6	P0DI80	62 aa		13.55	□□□□□ -0.24
UBE3A-208	ENST00000625681	ZNF625	Q96I27	306 aa	Predicted RBP	13.55	□□□□□ -0.24
UBE3A-208	ENST00000625681	IGLV1-50	A0A075B6I6	118 aa		13.54	□□□□□ -0.24
UBE3A-208	ENST00000625681	RNF151	Q2KHN1	245 aa		13.54	□□□□□ -0.24
UBE3A-208	ENST00000625681	C10orf25	Q5T742	122 aa		13.54	□□□□□ -0.24
UBE3A-208	ENST00000625681	KRTAP9-6	A0A140TA67	174 aa		13.53	□□□□□ -0.24
UBE3A-208	ENST00000625681	HERV-K104	P63124	156 aa		13.53	□□□□□ -0.24
UBE3A-208	ENST00000625681	PAM16	Q9Y3D7	125 aa		13.53	□□□□□ -0.24
UBE3A-208	ENST00000625681	SPATA45	Q537H7	98 aa		13.52	□□□□□ -0.25
UBE3A-208	ENST00000625681	C6orf48	Q9UBA6	75 aa		13.52	□□□□□ -0.25
UBE3A-208	ENST00000625681	S100A12	P80511	92 aa		13.51	□□□□□ -0.25
UBE3A-208	ENST00000625681	ZNF815P	A8K554	130 aa		13.5	□□□□□ -0.25
UBE3A-208	ENST00000625681	LCE2A	Q5TA79	106 aa	Predicted RBP	13.5	□□□□□ -0.25
UBE3A-208	ENST00000625681	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	13.49	□□□□□ -0.25
UBE3A-208	ENST00000625681	PCP2	Q8IVA1	136 aa		13.48	□□□□□ -0.25
UBE3A-208	ENST00000625681	TTTY13	Q9BZ97	58 aa		13.47	□□□□□ -0.25
UBE3A-208	ENST00000625681	ERG28	Q9UKR5	140 aa		13.47	□□□□□ -0.25
UBE3A-208	ENST00000625681	LINC00587	B1AMM8	73 aa		13.46	□□□□□ -0.25
UBE3A-208	ENST00000625681	COX17	Q14061	63 aa		13.46	□□□□□ -0.25
UBE3A-208	ENST00000625681	MEIG1	Q5JSS6	88 aa		13.46	□□□□□ -0.25
UBE3A-208	ENST00000625681	TSPAN13	O95857	204 aa		13.45	□□□□□ -0.26
UBE3A-208	ENST00000625681	TLX1NB	P0CAT3	122 aa		13.45	□□□□□ -0.26
UBE3A-208	ENST00000625681	KRTAP7-1	Q8IUC3	87 aa		13.45	□□□□□ -0.26
UBE3A-208	ENST00000625681	NDUFC2-KCTD14	E9PQ53	114 aa		13.44	□□□□□ -0.26
UBE3A-208	ENST00000625681	COX8A	P10176	69 aa		13.44	□□□□□ -0.26
UBE3A-208	ENST00000625681	GAGE2E	Q4V326	116 aa		13.44	□□□□□ -0.26
UBE3A-208	ENST00000625681	GAGE2D	Q9UEU5	116 aa		13.44	□□□□□ -0.26
UBE3A-208	ENST00000625681		A0A0J9YXY3	114 aa		13.43	□□□□□ -0.26
UBE3A-208	ENST00000625681	PFN2	P35080	140 aa		13.42	□□□□□ -0.26
UBE3A-208	ENST00000625681	RPL13A	P40429	203 aa	Known RBP	13.42	□□□□□ -0.26
UBE3A-208	ENST00000625681	SCGB1D4	Q6XE38	83 aa		13.42	□□□□□ -0.26
UBE3A-208	ENST00000625681	LINC00158	P58513	81 aa		13.41	□□□□□ -0.26
UBE3A-208	ENST00000625681	BOD1L2	Q8IYS8	172 aa		13.41	□□□□□ -0.26
UBE3A-208	ENST00000625681	DLEU1	O43261	78 aa		13.4	□□□□□ -0.26
UBE3A-208	ENST00000625681	SMIM13	P0DJ93	91 aa		13.4	□□□□□ -0.26
UBE3A-208	ENST00000625681	UBE2B	P63146	152 aa		13.4	□□□□□ -0.26
UBE3A-208	ENST00000625681	C14orf144	Q96I85	54 aa		13.4	□□□□□ -0.26
UBE3A-208	ENST00000625681	TIMM17B	O60830	172 aa		13.39	□□□□□ -0.27
UBE3A-208	ENST00000625681	SLC25A34	Q6PIV7	304 aa		13.39	□□□□□ -0.27
UBE3A-208	ENST00000625681	C12orf57	Q99622	126 aa		13.39	□□□□□ -0.27
UBE3A-208	ENST00000625681		M0QXV9	152 aa		13.38	□□□□□ -0.27
UBE3A-208	ENST00000625681		A0A0U1RRA0	63 aa		13.37	□□□□□ -0.27
UBE3A-208	ENST00000625681	TMEM238	C9JI98	176 aa		13.37	□□□□□ -0.27
UBE3A-208	ENST00000625681	MIR7-3HG	Q8N6C7	128 aa		13.35	□□□□□ -0.27
UBE3A-208	ENST00000625681	LINC00518	Q8N0U6	118 aa		13.33	□□□□□ -0.28
UBE3A-208	ENST00000625681	LITAF	Q99732	161 aa		13.33	□□□□□ -0.28
UBE3A-208	ENST00000625681	SND1-IT1	Q9HBX3	110 aa		13.33	□□□□□ -0.28
UBE3A-208	ENST00000625681	TP73-AS1	Q9UF72	201 aa		13.33	□□□□□ -0.28
UBE3A-208	ENST00000625681	MUC17	Q685J3	4493 aa		13.33	□□□□□ -0.28
UBE3A-208	ENST00000625681	ZNF861P	O60384	105 aa		13.31	□□□□□ -0.28
UBE3A-208	ENST00000625681	ADAMTSL4-AS1	Q5T5F5	129 aa		13.31	□□□□□ -0.28
UBE3A-208	ENST00000625681	DAND5	Q8N907	189 aa		13.31	□□□□□ -0.28
UBE3A-208	ENST00000625681	SPANXD	Q9BXN6	97 aa		13.31	□□□□□ -0.28
UBE3A-208	ENST00000625681	XAGE1A	Q9HD64	81 aa		13.31	□□□□□ -0.28
UBE3A-208	ENST00000625681	SPANXC	Q9NY87	97 aa		13.31	□□□□□ -0.28
UBE3A-208	ENST00000625681	UQCR10	Q9UDW1	63 aa		13.31	□□□□□ -0.28
UBE3A-208	ENST00000625681	C9orf129	Q5T035	196 aa	Known RBP	13.3	□□□□□ -0.28
UBE3A-208	ENST00000625681		Q6ZVH6	145 aa		13.3	□□□□□ -0.28
UBE3A-208	ENST00000625681	MIEN1	Q9BRT3	115 aa		13.29	□□□□□ -0.28
UBE3A-208	ENST00000625681	SPANXB1	Q9NS25	103 aa	Predicted RBP	13.29	□□□□□ -0.28
UBE3A-208	ENST00000625681	HIGD1B	Q9P298	99 aa		13.29	□□□□□ -0.28
UBE3A-208	ENST00000625681	COPS9	Q8WXC6	57 aa		13.28	□□□□□ -0.28
UBE3A-208	ENST00000625681		A0A087X002	238 aa		13.27	□□□□□ -0.29
UBE3A-208	ENST00000625681	PRO1933	Q9H354	126 aa		13.27	□□□□□ -0.29
UBE3A-208	ENST00000625681	TSTD3	H0UI37	97 aa		13.26	□□□□□ -0.29
UBE3A-208	ENST00000625681	C2orf91	Q6ZV80	131 aa		13.26	□□□□□ -0.29
UBE3A-208	ENST00000625681	LOC107984156	A0A0G2JMH3	177 aa		13.25	□□□□□ -0.29
UBE3A-208	ENST00000625681	IFITM1	P13164	125 aa		13.25	□□□□□ -0.29
UBE3A-208	ENST00000625681	ARL17A	Q8IVW1	177 aa		13.25	□□□□□ -0.29
UBE3A-208	ENST00000625681	LINC00308	Q8TCZ7	52 aa		13.25	□□□□□ -0.29
UBE3A-208	ENST00000625681	NPC2	P61916	151 aa		13.24	□□□□□ -0.29
UBE3A-208	ENST00000625681	HIST1H4G	Q99525	98 aa		13.23	□□□□□ -0.29
UBE3A-208	ENST00000625681	RETNLB	Q9BQ08	111 aa		13.23	□□□□□ -0.29
UBE3A-208	ENST00000625681	PPDPF	Q9H3Y8	114 aa		13.23	□□□□□ -0.29
UBE3A-208	ENST00000625681	RPL24	P83731	157 aa	Known RBP	13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms