RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 LCE2CQ5TA81 110 aa8.18□□□□□ -1.1
PNKP-218ENST00000625299 MT-ND4LP03901 98 aa8.16□□□□□ -1.1
PNKP-218ENST00000625299 ANAPC16Q96DE5 110 aa8.16□□□□□ -1.1
PNKP-218ENST00000625299 IGLV5-39A0A0G2JS06 123 aa8.15□□□□□ -1.1
PNKP-218ENST00000625299 COX17Q14061 63 aa8.15□□□□□ -1.1
PNKP-218ENST00000625299 XP32Q5T750 250 aa8.15□□□□□ -1.1
PNKP-218ENST00000625299 FAM19A2Q8N3H0 131 aa8.15□□□□□ -1.1
PNKP-218ENST00000625299 IGLV9-49A0A0B4J1Y8 123 aa8.14□□□□□ -1.11
PNKP-218ENST00000625299 NDUFA6P56556 154 aa8.14□□□□□ -1.11
PNKP-218ENST00000625299 MT1HP80294 61 aa8.14□□□□□ -1.11
PNKP-218ENST00000625299 MOBPQ13875 183 aa8.14□□□□□ -1.11
PNKP-218ENST00000625299 Q8N377 158 aa8.14□□□□□ -1.11
PNKP-218ENST00000625299 SMCR5Q8TEV8 140 aa8.14□□□□□ -1.11
PNKP-218ENST00000625299 LINC01549A6NIU2 74 aa8.13□□□□□ -1.11
PNKP-218ENST00000625299 IGLC3P0DOY3 106 aa8.13□□□□□ -1.11
PNKP-218ENST00000625299 ZNF22P17026 224 aaPredicted RBP8.13□□□□□ -1.11
PNKP-218ENST00000625299 GAGE2AQ6NT46 116 aa8.13□□□□□ -1.11
PNKP-218ENST00000625299 A0A0U1RRA0 63 aa8.12□□□□□ -1.11
PNKP-218ENST00000625299 CFC1BP0CG36 223 aa8.12□□□□□ -1.11
PNKP-218ENST00000625299 LINC00158P58513 81 aa8.12□□□□□ -1.11
PNKP-218ENST00000625299 ETDCA0A1B0GVM5 59 aa8.11□□□□□ -1.11
PNKP-218ENST00000625299 PRYO14603 147 aa8.11□□□□□ -1.11
PNKP-218ENST00000625299 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
PNKP-218ENST00000625299 NCR3O14931 201 aa8.1□□□□□ -1.11
PNKP-218ENST00000625299 SLC25A20O43772 301 aa8.1□□□□□ -1.11
PNKP-218ENST00000625299 FA2HQ7L5A8 372 aa8.1□□□□□ -1.11
PNKP-218ENST00000625299 SMCO4Q9NRQ5 59 aa8.1□□□□□ -1.11
PNKP-218ENST00000625299 RPS29P62273 56 aaKnown RBP8.09□□□□□ -1.11
PNKP-218ENST00000625299 LINC00483Q53H64 154 aa8.09□□□□□ -1.11
PNKP-218ENST00000625299 LINC01546A6NGU7 62 aa8.08□□□□□ -1.12
PNKP-218ENST00000625299 SFTA2Q6UW10 78 aa8.08□□□□□ -1.12
PNKP-218ENST00000625299 IGLV8-61A0A075B6I0 122 aa8.07□□□□□ -1.12
PNKP-218ENST00000625299 TMEM170BQ5T4T1 132 aa8.07□□□□□ -1.12
PNKP-218ENST00000625299 BOD1L2Q8IYS8 172 aa8.07□□□□□ -1.12
PNKP-218ENST00000625299 SPRR1AP35321 89 aa8.06□□□□□ -1.12
PNKP-218ENST00000625299 PCOTHQ58A44 107 aa8.06□□□□□ -1.12
PNKP-218ENST00000625299 SSBP3-AS1Q7Z2R9 100 aa8.06□□□□□ -1.12
PNKP-218ENST00000625299 ATP6V1G1O75348 118 aa8.05□□□□□ -1.12
PNKP-218ENST00000625299 LORP23490 312 aaPredicted RBP8.05□□□□□ -1.12
PNKP-218ENST00000625299 KRTAP10-6P60371 365 aaPredicted RBP8.05□□□□□ -1.12
PNKP-218ENST00000625299 KCNQ1DNQ9H478 68 aa8.05□□□□□ -1.12
PNKP-218ENST00000625299 TRBV10-3A0A0K0K1G6 114 aa8.04□□□□□ -1.12
PNKP-218ENST00000625299 C11orf86A6NJI1 115 aa8.04□□□□□ -1.12
PNKP-218ENST00000625299 KRTAP4-16G5E9R7 235 aaPredicted RBP8.04□□□□□ -1.12
PNKP-218ENST00000625299 ERC2-IT1O76042 136 aa8.04□□□□□ -1.12
PNKP-218ENST00000625299 C9orf153Q5TBE3 101 aa8.04□□□□□ -1.12
PNKP-218ENST00000625299 SMIM13P0DJ93 91 aa8.03□□□□□ -1.12
PNKP-218ENST00000625299 M0R2T5 61 aa8.02□□□□□ -1.13
PNKP-218ENST00000625299 S100A12P80511 92 aa8.02□□□□□ -1.13
PNKP-218ENST00000625299 MEIG1Q5JSS6 88 aa8.02□□□□□ -1.13
PNKP-218ENST00000625299 B5MCH6 92 aa8.01□□□□□ -1.13
PNKP-218ENST00000625299 BAGE3Q86Y29 109 aa8.01□□□□□ -1.13
PNKP-218ENST00000625299 A0A096LNJ9 63 aa8□□□□□ -1.13
PNKP-218ENST00000625299 C9orf92A6NGG3 77 aa8□□□□□ -1.13
PNKP-218ENST00000625299 MIR7-3HGQ8N6C7 128 aa8□□□□□ -1.13
PNKP-218ENST00000625299 FABP9Q0Z7S8 132 aa7.99□□□□□ -1.13
PNKP-218ENST00000625299 PMCHL1Q16048 86 aa7.99□□□□□ -1.13
PNKP-218ENST00000625299 TRAV9-1A0A075B6T8 112 aa7.98□□□□□ -1.13
PNKP-218ENST00000625299 HBDP02042 147 aa7.98□□□□□ -1.13
PNKP-218ENST00000625299 Q9BRP9 147 aa7.98□□□□□ -1.13
PNKP-218ENST00000625299 S100PP25815 95 aa7.96□□□□□ -1.14
PNKP-218ENST00000625299 CHTOPQ9Y3Y2 248 aaKnown RBP7.96□□□□□ -1.14
PNKP-218ENST00000625299 TMEM223A0PJW6 202 aa7.95□□□□□ -1.14
PNKP-218ENST00000625299 DDTP30046 118 aa7.95□□□□□ -1.14
PNKP-218ENST00000625299 Q6ZRX8 168 aa7.95□□□□□ -1.14
PNKP-218ENST00000625299 HRCT1Q6UXD1 115 aa7.94□□□□□ -1.14
PNKP-218ENST00000625299 COX6B2Q6YFQ2 88 aa7.94□□□□□ -1.14
PNKP-218ENST00000625299 URB1-AS1Q96HZ7 61 aa7.94□□□□□ -1.14
PNKP-218ENST00000625299 LINC00614P0C842 121 aa7.93□□□□□ -1.14
PNKP-218ENST00000625299 HERV-K104P63124 156 aa7.92□□□□□ -1.14
PNKP-218ENST00000625299 COX19Q49B96 90 aa7.92□□□□□ -1.14
PNKP-218ENST00000625299 LIMD2Q9BT23 127 aa7.92□□□□□ -1.14
PNKP-218ENST00000625299 SEC11CQ9BY50 192 aa7.92□□□□□ -1.14
PNKP-218ENST00000625299 KRTAP9-7A8MTY7 169 aa7.91□□□□□ -1.14
PNKP-218ENST00000625299 ST20-AS1Q8NBB2 130 aa7.91□□□□□ -1.14
PNKP-218ENST00000625299 MAP1LC3CQ9BXW4 147 aa7.91□□□□□ -1.14
PNKP-218ENST00000625299 FLGP20930 4061 aaPredicted RBP7.91□□□□□ -1.14
PNKP-218ENST00000625299 C18orf32Q8TCD1 76 aa7.9□□□□□ -1.14
PNKP-218ENST00000625299 LINC00587B1AMM8 73 aa7.89□□□□□ -1.15
PNKP-218ENST00000625299 IGLV6-57P01721 117 aa7.89□□□□□ -1.15
PNKP-218ENST00000625299 JOSD1Q15040 202 aaPredicted RBP7.89□□□□□ -1.15
PNKP-218ENST00000625299 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.88□□□□□ -1.15
PNKP-218ENST00000625299 S100A7L2Q5SY68 101 aa7.88□□□□□ -1.15
PNKP-218ENST00000625299 TRAV23DV6A0A075B6W5 121 aa7.87□□□□□ -1.15
PNKP-218ENST00000625299 TRBV10-2A0A0K0K1G8 114 aa7.87□□□□□ -1.15
PNKP-218ENST00000625299 MYMXA0A1B0GTQ4 84 aa7.87□□□□□ -1.15
PNKP-218ENST00000625299 SPANXB1Q9NS25 103 aaPredicted RBP7.87□□□□□ -1.15
PNKP-218ENST00000625299 TMEM218A2RU14 115 aa7.85□□□□□ -1.15
PNKP-218ENST00000625299 MIEN1Q9BRT3 115 aa7.85□□□□□ -1.15
PNKP-218ENST00000625299 TRAPPC1Q9Y5R8 145 aa7.85□□□□□ -1.15
PNKP-218ENST00000625299 TRAV12-1A0A0B4J245 112 aa7.84□□□□□ -1.15
PNKP-218ENST00000625299 IFITM2Q01629 132 aa7.84□□□□□ -1.15
PNKP-218ENST00000625299 ZNF73O43830 326 aaPredicted RBP7.83□□□□□ -1.16
PNKP-218ENST00000625299 IFI27L1Q96BM0 104 aa7.83□□□□□ -1.16
PNKP-218ENST00000625299 LOC107984156A0A0G2JMH3 177 aa7.82□□□□□ -1.16
PNKP-218ENST00000625299 TSPEAR-AS2P59090 65 aa7.82□□□□□ -1.16
PNKP-218ENST00000625299 ARL17AQ8IVW1 177 aa7.82□□□□□ -1.16
PNKP-218ENST00000625299 RPS10P5Q9NQ39 176 aa7.82□□□□□ -1.16
PNKP-218ENST00000625299 H7C2G1 150 aa7.81□□□□□ -1.16
PNKP-218ENST00000625299 H0Y8G0 127 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 247.9 ms