RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 FAM30AQ9NZY2 134 aa6.38□□□□□ -1.39
USB1-216ENST00000624720 JMJD7-PLA2G4BH0Y9G9 81 aa6.38□□□□□ -1.39
USB1-216ENST00000624720 BPY2O14599 106 aa6.38□□□□□ -1.39
USB1-216ENST00000624720 NANOS2P60321 138 aaKnown RBP6.38□□□□□ -1.39
USB1-216ENST00000624720 RPL39P62891 51 aaKnown RBP6.38□□□□□ -1.39
USB1-216ENST00000624720 ZFAND3Q9H8U3 227 aa6.38□□□□□ -1.39
USB1-216ENST00000624720 MUC4Q99102 2169 aa6.38□□□□□ -1.39
USB1-216ENST00000624720 PRR15LQ9BU68 103 aa6.37□□□□□ -1.39
USB1-216ENST00000624720 C19orf73Q9NVV2 129 aa6.37□□□□□ -1.39
USB1-216ENST00000624720 C3orf84H3BNL1 204 aa6.37□□□□□ -1.39
USB1-216ENST00000624720 SLURP1P55000 103 aa6.37□□□□□ -1.39
USB1-216ENST00000624720 Q6YL49 198 aa6.37□□□□□ -1.39
USB1-216ENST00000624720 LINC00308Q8TCZ7 52 aa6.37□□□□□ -1.39
USB1-216ENST00000624720 A0A087WYN8 130 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 PPP1R17O96001 155 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 SCXQ7RTU7 201 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 HIGD2AQ9BW72 106 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 RHPN1-AS1Q9BWJ2 59 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 ORMDL1Q9P0S3 153 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 DNAJC9-AS1A6NH13 148 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 CYSRT1A8MQ03 144 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 RETNLBQ9BQ08 111 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 ZNF702PQ9H963 129 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 CELA1Q9UNI1 258 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 IGHV4OR15-8A0A075B7B6 117 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 A0A087WW49 117 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 HTN1P15515 57 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 Q75L30 129 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 DEFB104AQ8WTQ1 72 aa6.36□□□□□ -1.39
USB1-216ENST00000624720 INAFM1C9JVW0 142 aa6.35□□□□□ -1.39
USB1-216ENST00000624720 IGHV4-4A0A075B6R2 117 aa6.35□□□□□ -1.39
USB1-216ENST00000624720 TENM1Q9UKZ4 2725 aa6.34□□□□□ -1.39
USB1-216ENST00000624720 IGHV3OR16-9A0A0B4J2B5 98 aa6.34□□□□□ -1.39
USB1-216ENST00000624720 H0YGX0 51 aa6.34□□□□□ -1.39
USB1-216ENST00000624720 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.34□□□□□ -1.39
USB1-216ENST00000624720 NSD1Q96L73 2696 aaPredicted RBP6.34□□□□□ -1.39
USB1-216ENST00000624720 VWFP04275 2813 aa6.34□□□□□ -1.39
USB1-216ENST00000624720 TRBV10-1A0A0K0K1A3 114 aa6.33□□□□□ -1.4
USB1-216ENST00000624720 LY6G6DO95868 133 aa6.33□□□□□ -1.4
USB1-216ENST00000624720 KRTAP1-1Q07627 177 aa6.33□□□□□ -1.4
USB1-216ENST00000624720 CDC42SE2Q9NRR3 84 aa6.33□□□□□ -1.4
USB1-216ENST00000624720 LECT2O14960 151 aa6.33□□□□□ -1.4
USB1-216ENST00000624720 Q6ZTI0 123 aa6.33□□□□□ -1.4
USB1-216ENST00000624720 IGLV1-40P01703 118 aa6.32□□□□□ -1.4
USB1-216ENST00000624720 NBEAL2Q6ZNJ1 2754 aa6.32□□□□□ -1.4
USB1-216ENST00000624720 IGKV3D-20A0A0C4DH25 116 aa6.32□□□□□ -1.4
USB1-216ENST00000624720 PDE6HQ13956 83 aa6.32□□□□□ -1.4
USB1-216ENST00000624720 Q8N9P0 234 aaPredicted RBP6.32□□□□□ -1.4
USB1-216ENST00000624720 IGHV7-4-1A0A0J9YVY3 117 aa6.32□□□□□ -1.4
USB1-216ENST00000624720 IGKV2-29A2NJV5 120 aaPredicted RBP6.32□□□□□ -1.4
USB1-216ENST00000624720 K7EQD1 137 aa6.32□□□□□ -1.4
USB1-216ENST00000624720 ANK3Q12955 4377 aaKnown RBP6.31□□□□□ -1.4
USB1-216ENST00000624720 OCR1Q9BZK8 76 aa6.31□□□□□ -1.4
USB1-216ENST00000624720 FSHBP01225 129 aa6.31□□□□□ -1.4
USB1-216ENST00000624720 USMG5Q96IX5 58 aa6.31□□□□□ -1.4
USB1-216ENST00000624720 MAST4O15021 2626 aa6.3□□□□□ -1.4
USB1-216ENST00000624720 MGPP08493 103 aa6.3□□□□□ -1.4
USB1-216ENST00000624720 NDUFA4O00483 81 aa6.3□□□□□ -1.4
USB1-216ENST00000624720 SLPIP03973 132 aa6.3□□□□□ -1.4
USB1-216ENST00000624720 MAP6D1Q9H9H5 199 aa6.3□□□□□ -1.4
USB1-216ENST00000624720 PRR9Q5T870 116 aa6.29□□□□□ -1.4
USB1-216ENST00000624720 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
USB1-216ENST00000624720 CRPP02741 224 aa6.29□□□□□ -1.4
USB1-216ENST00000624720 CASC2Q6XLA1 102 aa6.29□□□□□ -1.4
USB1-216ENST00000624720 STAB1Q9NY15 2570 aa6.29□□□□□ -1.4
USB1-216ENST00000624720 TRRAPQ9Y4A5 3859 aa6.29□□□□□ -1.4
USB1-216ENST00000624720 PLA2G1BP04054 148 aaKnown RBP6.28□□□□□ -1.4
USB1-216ENST00000624720 LINC00476Q8WZB0 136 aa6.28□□□□□ -1.4
USB1-216ENST00000624720 C9orf47Q6ZRZ4 202 aa6.28□□□□□ -1.4
USB1-216ENST00000624720 C11orf21Q9P2W6 132 aa6.28□□□□□ -1.4
USB1-216ENST00000624720 GYPEP15421 78 aa6.28□□□□□ -1.4
USB1-216ENST00000624720 RPL36AP83881 106 aaKnown RBP6.28□□□□□ -1.4
USB1-216ENST00000624720 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
USB1-216ENST00000624720 LINC01006Q8NI28 216 aa6.28□□□□□ -1.4
USB1-216ENST00000624720 IGHV3OR16-12A0A075B7B8 117 aa6.27□□□□□ -1.41
USB1-216ENST00000624720 F5H697 171 aa6.27□□□□□ -1.41
USB1-216ENST00000624720 NDUFA1O15239 70 aa6.27□□□□□ -1.41
USB1-216ENST00000624720 PRB2P02812 416 aaPredicted RBP6.27□□□□□ -1.41
USB1-216ENST00000624720 LOC101927531A0A1B0GV80 90 aa6.27□□□□□ -1.41
USB1-216ENST00000624720 POLR2KP53803 58 aaKnown RBP6.27□□□□□ -1.41
USB1-216ENST00000624720 SPINK13Q1W4C9 94 aa6.27□□□□□ -1.41
USB1-216ENST00000624720 KLK9Q9UKQ9 250 aa6.27□□□□□ -1.41
USB1-216ENST00000624720 DEFB131AP59861 70 aa6.26□□□□□ -1.41
USB1-216ENST00000624720 WFDC10AQ9H1F0 79 aa6.26□□□□□ -1.41
USB1-216ENST00000624720 SMIM11BQ8TCY0 68 aa6.25□□□□□ -1.41
USB1-216ENST00000624720 CHCHD10Q8WYQ3 142 aaPredicted RBP6.25□□□□□ -1.41
USB1-216ENST00000624720 COL6A5A8TX70 2615 aa6.25□□□□□ -1.41
USB1-216ENST00000624720 PRR4Q16378 134 aa6.25□□□□□ -1.41
USB1-216ENST00000624720 C20orf203Q8NBC4 194 aa6.25□□□□□ -1.41
USB1-216ENST00000624720 Q8N814 137 aa6.24□□□□□ -1.41
USB1-216ENST00000624720 IGLV4-3A0A075B6K6 122 aa6.24□□□□□ -1.41
USB1-216ENST00000624720 H3BUA1 57 aa6.24□□□□□ -1.41
USB1-216ENST00000624720 SND1-IT1Q9HBX3 110 aa6.24□□□□□ -1.41
USB1-216ENST00000624720 Q6ZQT0 140 aa6.23□□□□□ -1.41
USB1-216ENST00000624720 IGHV3-38A0A0C4DH36 116 aa6.23□□□□□ -1.41
USB1-216ENST00000624720 ASB16-AS1Q495Z4 193 aa6.23□□□□□ -1.41
USB1-216ENST00000624720 IGLV1-51P01701 117 aa6.22□□□□□ -1.41
USB1-216ENST00000624720 TRBV6-5A0A0K0K1A5 114 aa6.22□□□□□ -1.41
USB1-216ENST00000624720 FAM74A4Q5TZK3 123 aa6.22□□□□□ -1.41
USB1-216ENST00000624720 NOTCH1P46531 2555 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms