RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 NDUFC2-KCTD14E9PQ53 114 aa10.86□□□□□ -0.67
LDB3-208ENST00000623007 S100A7L2Q5SY68 101 aa10.86□□□□□ -0.67
LDB3-208ENST00000623007 DNAL4O96015 105 aa10.85□□□□□ -0.67
LDB3-208ENST00000623007 SYCNQ0VAF6 134 aa10.85□□□□□ -0.67
LDB3-208ENST00000623007 HIGD2BQ4VC39 106 aa10.85□□□□□ -0.67
LDB3-208ENST00000623007 UBE2DNLQ8IWF7 75 aa10.85□□□□□ -0.67
LDB3-208ENST00000623007 VPS25Q9BRG1 176 aa10.85□□□□□ -0.67
LDB3-208ENST00000623007 Q9HAA7 133 aa10.85□□□□□ -0.67
LDB3-208ENST00000623007 NOTCH1P46531 2555 aa10.85□□□□□ -0.67
LDB3-208ENST00000623007 APLNQ9ULZ1 77 aa10.85□□□□□ -0.67
LDB3-208ENST00000623007 TENM3Q9P273 2699 aa10.83□□□□□ -0.68
LDB3-208ENST00000623007 TLX1NBP0CAT3 122 aa10.82□□□□□ -0.68
LDB3-208ENST00000623007 Q6ZRU5 148 aa10.82□□□□□ -0.68
LDB3-208ENST00000623007 LINC00526Q96FQ7 95 aa10.82□□□□□ -0.68
LDB3-208ENST00000623007 TTC32Q5I0X7 151 aa10.82□□□□□ -0.68
LDB3-208ENST00000623007 MGAM2Q2M2H8 2515 aa10.8□□□□□ -0.68
LDB3-208ENST00000623007 IGLV6-57P01721 117 aa10.79□□□□□ -0.68
LDB3-208ENST00000623007 USP17L23D6RBM5 183 aa10.79□□□□□ -0.68
LDB3-208ENST00000623007 C14orf177Q52M58 125 aa10.79□□□□□ -0.68
LDB3-208ENST00000623007 H3BQ85 93 aa10.78□□□□□ -0.68
LDB3-208ENST00000623007 M0R378 163 aa10.77□□□□□ -0.69
LDB3-208ENST00000623007 NCR3O14931 201 aa10.77□□□□□ -0.69
LDB3-208ENST00000623007 GHRHP01286 108 aa10.77□□□□□ -0.69
LDB3-208ENST00000623007 TRBV7-6A0A0J9YX20 115 aa10.76□□□□□ -0.69
LDB3-208ENST00000623007 BAALC-AS2P0C853 105 aa10.76□□□□□ -0.69
LDB3-208ENST00000623007 PLA2G2DQ9UNK4 145 aa10.76□□□□□ -0.69
LDB3-208ENST00000623007 PKIGQ9Y2B9 76 aa10.76□□□□□ -0.69
LDB3-208ENST00000623007 FAM218AQ96MZ4 157 aa10.75□□□□□ -0.69
LDB3-208ENST00000623007 INAFM2P0DMQ5 153 aa10.74□□□□□ -0.69
LDB3-208ENST00000623007 PRR3P79522 188 aaKnown RBP10.74□□□□□ -0.69
LDB3-208ENST00000623007 RPL18AQ02543 176 aaKnown RBP10.74□□□□□ -0.69
LDB3-208ENST00000623007 XAGE1AQ9HD64 81 aa10.74□□□□□ -0.69
LDB3-208ENST00000623007 VPREB1P12018 145 aa10.73□□□□□ -0.69
LDB3-208ENST00000623007 ORMDL1Q9P0S3 153 aa10.73□□□□□ -0.69
LDB3-208ENST00000623007 LECT2O14960 151 aa10.73□□□□□ -0.69
LDB3-208ENST00000623007 PSCAO43653 123 aa10.73□□□□□ -0.69
LDB3-208ENST00000623007 C6orf99Q4VX62 202 aa10.73□□□□□ -0.69
LDB3-208ENST00000623007 LINC00167Q96N53 147 aa10.73□□□□□ -0.69
LDB3-208ENST00000623007 TRAV23DV6A0A075B6W5 121 aa10.72□□□□□ -0.69
LDB3-208ENST00000623007 DIRC1Q969H9 104 aa10.72□□□□□ -0.69
LDB3-208ENST00000623007 A0A087WYN8 130 aa10.71□□□□□ -0.69
LDB3-208ENST00000623007 FAM240AA0A1B0GVK7 77 aa10.71□□□□□ -0.69
LDB3-208ENST00000623007 Q6ZRP5 223 aa10.71□□□□□ -0.69
LDB3-208ENST00000623007 Q8N814 137 aa10.71□□□□□ -0.69
LDB3-208ENST00000623007 LOC107984640A0A0U1RRK4 108 aa10.7□□□□□ -0.7
LDB3-208ENST00000623007 TEX49A0A1B0GTD5 131 aa10.7□□□□□ -0.7
LDB3-208ENST00000623007 ACYP1P07311 99 aa10.7□□□□□ -0.7
LDB3-208ENST00000623007 GAGE2EQ4V326 116 aa10.7□□□□□ -0.7
LDB3-208ENST00000623007 GAGE2DQ9UEU5 116 aa10.7□□□□□ -0.7
LDB3-208ENST00000623007 TMEM256-PLSCR3K7ERE1 68 aa10.69□□□□□ -0.7
LDB3-208ENST00000623007 NKAPP1Q8N9T2 125 aa10.69□□□□□ -0.7
LDB3-208ENST00000623007 Q8NDZ9 215 aa10.69□□□□□ -0.7
LDB3-208ENST00000623007 TRBV10-3A0A0K0K1G6 114 aa10.69□□□□□ -0.7
LDB3-208ENST00000623007 IGLV5-37A0A075B6J1 123 aa10.68□□□□□ -0.7
LDB3-208ENST00000623007 CNBPP62633 177 aaKnown RBP10.68□□□□□ -0.7
LDB3-208ENST00000623007 LINC00575Q6W349 94 aa10.68□□□□□ -0.7
LDB3-208ENST00000623007 MEGF8Q7Z7M0 2845 aa10.68□□□□□ -0.7
LDB3-208ENST00000623007 HUWE1Q7Z6Z7 4374 aaKnown RBP10.67□□□□□ -0.7
LDB3-208ENST00000623007 ZNF73O43830 326 aaPredicted RBP10.67□□□□□ -0.7
LDB3-208ENST00000623007 NBDYA0A0U1RRE5 68 aa10.66□□□□□ -0.7
LDB3-208ENST00000623007 hADV29S1A0JD25 119 aa10.66□□□□□ -0.7
LDB3-208ENST00000623007 JMJD7-PLA2G4BH0Y9G9 81 aa10.66□□□□□ -0.7
LDB3-208ENST00000623007 SIGMAR1Q99720 223 aa10.66□□□□□ -0.7
LDB3-208ENST00000623007 C9orf129Q5T035 196 aaKnown RBP10.65□□□□□ -0.7
LDB3-208ENST00000623007 COX7BP24311 80 aa10.64□□□□□ -0.71
LDB3-208ENST00000623007 SLPIP03973 132 aa10.63□□□□□ -0.71
LDB3-208ENST00000623007 CASC10Q5T4H9 136 aa10.63□□□□□ -0.71
LDB3-208ENST00000623007 KRTAP1-5Q9BYS1 174 aa10.63□□□□□ -0.71
LDB3-208ENST00000623007 ELOF1P60002 83 aaKnown RBP10.63□□□□□ -0.71
LDB3-208ENST00000623007 C21orf62-AS1Q17RA5 79 aa10.63□□□□□ -0.71
LDB3-208ENST00000623007 OBSCN-AS1Q96MR7 158 aa10.62□□□□□ -0.71
LDB3-208ENST00000623007 KCNQ1DNQ9H478 68 aa10.62□□□□□ -0.71
LDB3-208ENST00000623007 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.61□□□□□ -0.71
LDB3-208ENST00000623007 PRYO14603 147 aa10.6□□□□□ -0.71
LDB3-208ENST00000623007 C16orf90A8MZG2 172 aa10.59□□□□□ -0.71
LDB3-208ENST00000623007 SCGB1A1P11684 91 aa10.59□□□□□ -0.71
LDB3-208ENST00000623007 GAGE2BQ13066 116 aa10.59□□□□□ -0.71
LDB3-208ENST00000623007 CDIP1Q9H305 208 aa10.59□□□□□ -0.71
LDB3-208ENST00000623007 C22orf24Q9Y442 160 aa10.57□□□□□ -0.72
LDB3-208ENST00000623007 C7orf33Q8WU49 177 aa10.57□□□□□ -0.72
LDB3-208ENST00000623007 LINC00474Q9P2X8 69 aa10.57□□□□□ -0.72
LDB3-208ENST00000623007 STAB2Q8WWQ8 2551 aa10.55□□□□□ -0.72
LDB3-208ENST00000623007 SERTAD4-AS1Q5TG53 156 aa10.55□□□□□ -0.72
LDB3-208ENST00000623007 MRPL55Q7Z7F7 128 aaKnown RBP10.55□□□□□ -0.72
LDB3-208ENST00000623007 LINC00528Q8N1L1 170 aa10.55□□□□□ -0.72
LDB3-208ENST00000623007 PDE6GP18545 87 aa10.54□□□□□ -0.72
LDB3-208ENST00000623007 DHRS4-AS1Q9P1J3 65 aa10.54□□□□□ -0.72
LDB3-208ENST00000623007 IGLV1-50A0A075B6I6 118 aa10.53□□□□□ -0.72
LDB3-208ENST00000623007 DNAH9Q9NYC9 4486 aa10.52□□□□□ -0.72
LDB3-208ENST00000623007 LRCOL1A6NCL2 159 aa10.52□□□□□ -0.73
LDB3-208ENST00000623007 Q6ZQY7 126 aa10.52□□□□□ -0.73
LDB3-208ENST00000623007 Q6ZRN7 208 aaPredicted RBP10.52□□□□□ -0.73
LDB3-208ENST00000623007 C9orf163Q8N9P6 203 aa10.52□□□□□ -0.73
LDB3-208ENST00000623007 SPRR1AP35321 89 aa10.51□□□□□ -0.73
LDB3-208ENST00000623007 COL7A1Q02388 2944 aa10.5□□□□□ -0.73
LDB3-208ENST00000623007 ETDCA0A1B0GVM5 59 aa10.49□□□□□ -0.73
LDB3-208ENST00000623007 RBM3P98179 157 aaKnown RBP10.49□□□□□ -0.73
LDB3-208ENST00000623007 XGP55808 180 aa10.48□□□□□ -0.73
LDB3-208ENST00000623007 GAGE2AQ6NT46 116 aa10.48□□□□□ -0.73
LDB3-208ENST00000623007 Q6ZRX8 168 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms