RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 AHNAK2Q8IVF2 5795 aa1.12□□□□□ -2.23
CPNE3-211ENST00000621526 HMCN1Q96RW7 5635 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 FAM236DA0A1B0GTK5 79 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 FAM240BA0A1B0GVZ2 78 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 HMSDA8MTL9 139 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 UMAD1C9J7I0 102 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 H7C2G1 150 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 ATP6V1G2O95670 118 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 TCL1BO95988 128 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 GHRHP01286 108 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 FAM236CP0DP71 79 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 RAB5AP20339 215 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 G0S2P27469 103 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 AKR1D1P51857 326 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 DEFA1P59665 94 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 JOSD1Q15040 202 aaPredicted RBP1.11□□□□□ -2.23
CPNE3-211ENST00000621526 Q1RN00 199 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 CENPWQ5EE01 88 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 CT83Q5H943 113 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 C9orf153Q5TBE3 101 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 FAM104BQ5XKR9 115 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 AMN1Q8IY45 258 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 KCNRGQ8N5I3 272 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 Q8N9P0 234 aaPredicted RBP1.11□□□□□ -2.23
CPNE3-211ENST00000621526 COX7B2Q8TF08 81 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 BORCS7Q96B45 105 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 MRPL18Q9H0U6 180 aaKnown RBP1.11□□□□□ -2.23
CPNE3-211ENST00000621526 PRO1933Q9H354 126 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 MED9Q9NWA0 146 aa1.11□□□□□ -2.23
CPNE3-211ENST00000621526 IGLV5-45A0A087WSX0 123 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 IGIPA6NJ69 53 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 A8MUU9 505 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 SMIM1B2RUZ4 78 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 PDE6DO43924 150 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 PPBPP02775 128 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 H2AFB1P0C5Y9 115 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 CKS2P33552 79 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 PFN2P35080 140 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 RIGQ13278 110 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 Q5BKY6 102 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 RPL7L1Q6DKI1 246 aaKnown RBP1.1□□□□□ -2.23
CPNE3-211ENST00000621526 SFTA2Q6UW10 78 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 HRCT1Q6UXD1 115 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 Q8NDZ9 215 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 OCC1Q8TAD7 63 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 ENKURQ8TC29 256 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 ZNF625Q96I27 306 aaPredicted RBP1.1□□□□□ -2.23
CPNE3-211ENST00000621526 Q9BRP9 147 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 SMIM2Q9BVW6 85 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 MANBALQ9NQG1 85 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 LAMTOR3Q9UHA4 124 aa1.1□□□□□ -2.23
CPNE3-211ENST00000621526 TINCRA0A1B0GVN0 87 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 A0A1B0GW15 77 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 HIGD1CA8MV81 97 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 SMKR1H3BMG3 65 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 K7EMI3 77 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 GATCO43716 136 aaKnown RBP1.09□□□□□ -2.23
CPNE3-211ENST00000621526 MT1BP07438 61 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 HRES1P13985 223 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 NDUFA6P56556 154 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 MRPL51Q4U2R6 128 aaKnown RBP1.09□□□□□ -2.23
CPNE3-211ENST00000621526 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 KRTAP5-7Q6L8G8 165 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 Q6ZRX8 168 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 NOTCH2NLQ7Z3S9 236 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 S100ZQ8WXG8 99 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 OBSCN-AS1Q96MR7 158 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 BATF3Q9NR55 127 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 ERG28Q9UKR5 140 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 CYSLTR1Q9Y271 337 aa1.09□□□□□ -2.23
CPNE3-211ENST00000621526 IGLV5-39A0A0G2JS06 123 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 TRBV10-2A0A0K0K1G8 114 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 LINC01549A6NIU2 74 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 KRTAP16-1A8MUX0 517 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 TEX46H3BTG2 121 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 K7EN84 100 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 SSNA1O43805 119 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 KRTAP19-8Q3LI54 63 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 ZC2HC1BQ5TFG8 222 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 Q5VV11 94 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 FA2HQ7L5A8 372 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 PCP2Q8IVA1 136 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 Q96NJ1 140 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 KRTAP4-9Q9BYQ8 210 aa1.08□□□□□ -2.24
CPNE3-211ENST00000621526 TRBV10-3A0A0K0K1G6 114 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 LOC389332A0A1B0GUA5 103 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 LINC00587B1AMM8 73 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 F8W036 122 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 H3BRM9 83 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 S100A8P05109 93 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 HINT1P49773 126 aaPredicted RBP1.07□□□□□ -2.24
CPNE3-211ENST00000621526 LINC00158P58513 81 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 ORMDL2Q53FV1 153 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 IGFL1Q6UW32 110 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 TMEM136Q6ZRR5 245 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 ERASQ7Z444 233 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 BOD1L2Q8IYS8 172 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 ST20-AS1Q8NBB2 130 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 FAM213BQ8TBF2 198 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 OSTCQ9NRP0 149 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms