RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 Q8NDZ9 215 aa8.86□□□□□ -0.99
CBWD3-217ENST00000621474 LRP1Q07954 4544 aaKnown RBP8.85□□□□□ -0.99
CBWD3-217ENST00000621474 ATOH7Q8N100 152 aa8.85□□□□□ -0.99
CBWD3-217ENST00000621474 PLA2G2DQ9UNK4 145 aa8.85□□□□□ -0.99
CBWD3-217ENST00000621474 C22orf24Q9Y442 160 aa8.85□□□□□ -0.99
CBWD3-217ENST00000621474 LGALS3P17931 250 aaKnown RBP8.84□□□□□ -0.99
CBWD3-217ENST00000621474 NMUP48645 174 aa8.84□□□□□ -0.99
CBWD3-217ENST00000621474 PSORS1C2Q9UIG4 136 aa8.84□□□□□ -0.99
CBWD3-217ENST00000621474 C20orf202A1L168 122 aa8.83□□□□□ -1
CBWD3-217ENST00000621474 LINC00158P58513 81 aa8.83□□□□□ -1
CBWD3-217ENST00000621474 MEIG1Q5JSS6 88 aa8.83□□□□□ -1
CBWD3-217ENST00000621474 IGLV5-37A0A075B6J1 123 aa8.83□□□□□ -1
CBWD3-217ENST00000621474 ANKRD39Q53RE8 183 aa8.83□□□□□ -1
CBWD3-217ENST00000621474 TTTY13Q9BZ97 58 aa8.83□□□□□ -1
CBWD3-217ENST00000621474 TP73-AS1Q9UF72 201 aa8.83□□□□□ -1
CBWD3-217ENST00000621474 VPREB1P12018 145 aa8.82□□□□□ -1
CBWD3-217ENST00000621474 MIR7-3HGQ8N6C7 128 aa8.82□□□□□ -1
CBWD3-217ENST00000621474 MRPL55Q7Z7F7 128 aaKnown RBP8.81□□□□□ -1
CBWD3-217ENST00000621474 DAND5Q8N907 189 aa8.81□□□□□ -1
CBWD3-217ENST00000621474 A0A0J9YXY3 114 aa8.8□□□□□ -1
CBWD3-217ENST00000621474 FAT3Q8TDW7 4589 aa8.8□□□□□ -1
CBWD3-217ENST00000621474 LINC00587B1AMM8 73 aa8.79□□□□□ -1
CBWD3-217ENST00000621474 UBE2BP63146 152 aa8.79□□□□□ -1
CBWD3-217ENST00000621474 LINC00167Q96N53 147 aa8.79□□□□□ -1
CBWD3-217ENST00000621474 SRSF9Q13242 221 aaKnown RBP eCLIP8.78□□□□□ -1
CBWD3-217ENST00000621474 ADAMTSL4-AS1Q5T5F5 129 aa8.78□□□□□ -1
CBWD3-217ENST00000621474 LITAFQ99732 161 aa8.78□□□□□ -1
CBWD3-217ENST00000621474 LOC107984156A0A0G2JMH3 177 aa8.77□□□□□ -1.01
CBWD3-217ENST00000621474 EIF4EBP3O60516 100 aaPredicted RBP8.77□□□□□ -1.01
CBWD3-217ENST00000621474 AKR1D1P51857 326 aa8.77□□□□□ -1.01
CBWD3-217ENST00000621474 C1orf137Q5JT78 98 aa8.77□□□□□ -1.01
CBWD3-217ENST00000621474 ARL17AQ8IVW1 177 aa8.77□□□□□ -1.01
CBWD3-217ENST00000621474 GAGE10A6NGK3 116 aa8.76□□□□□ -1.01
CBWD3-217ENST00000621474 RPL37AP8A6NKH3 93 aa8.76□□□□□ -1.01
CBWD3-217ENST00000621474 ZNF815PA8K554 130 aa8.76□□□□□ -1.01
CBWD3-217ENST00000621474 LBHQ53QV2 105 aaPredicted RBP8.76□□□□□ -1.01
CBWD3-217ENST00000621474 NKAPP1Q8N9T2 125 aa8.76□□□□□ -1.01
CBWD3-217ENST00000621474 SOSTDC1Q6X4U4 206 aa8.76□□□□□ -1.01
CBWD3-217ENST00000621474 PCP2Q8IVA1 136 aa8.76□□□□□ -1.01
CBWD3-217ENST00000621474 RPL24P83731 157 aaKnown RBP8.75□□□□□ -1.01
CBWD3-217ENST00000621474 BOD1L2Q8IYS8 172 aa8.75□□□□□ -1.01
CBWD3-217ENST00000621474 IGLV7-43P04211 117 aa8.74□□□□□ -1.01
CBWD3-217ENST00000621474 TMA7Q9Y2S6 64 aaKnown RBP8.74□□□□□ -1.01
CBWD3-217ENST00000621474 IGLV1-50A0A075B6I6 118 aa8.73□□□□□ -1.01
CBWD3-217ENST00000621474 IGKV2-28A0A075B6P5 120 aa8.73□□□□□ -1.01
CBWD3-217ENST00000621474 IGKV2D-28P01615 120 aa8.73□□□□□ -1.01
CBWD3-217ENST00000621474 TIMM17BO60830 172 aa8.72□□□□□ -1.01
CBWD3-217ENST00000621474 SCGB1D1O95968 90 aa8.72□□□□□ -1.01
CBWD3-217ENST00000621474 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
CBWD3-217ENST00000621474 TNXBP22105 4242 aa8.72□□□□□ -1.01
CBWD3-217ENST00000621474 NPC2P61916 151 aa8.72□□□□□ -1.01
CBWD3-217ENST00000621474 KRTAP29-1A8MX34 341 aaPredicted RBP8.7□□□□□ -1.02
CBWD3-217ENST00000621474 NCR3O14931 201 aa8.7□□□□□ -1.02
CBWD3-217ENST00000621474 M0R378 163 aa8.69□□□□□ -1.02
CBWD3-217ENST00000621474 DMBT1Q9UGM3 2413 aaPredicted RBP8.69□□□□□ -1.02
CBWD3-217ENST00000621474 TMEM238C9JI98 176 aa8.69□□□□□ -1.02
CBWD3-217ENST00000621474 BCE1O60756 84 aa8.69□□□□□ -1.02
CBWD3-217ENST00000621474 JOSD1Q15040 202 aaPredicted RBP8.69□□□□□ -1.02
CBWD3-217ENST00000621474 LINC00308Q8TCZ7 52 aa8.69□□□□□ -1.02
CBWD3-217ENST00000621474 HSBP1L1C9JCN9 74 aa8.68□□□□□ -1.02
CBWD3-217ENST00000621474 NDUFC2O95298 119 aa8.68□□□□□ -1.02
CBWD3-217ENST00000621474 SCGB1D4Q6XE38 83 aa8.68□□□□□ -1.02
CBWD3-217ENST00000621474 KRTAP13-1Q8IUC0 172 aa8.68□□□□□ -1.02
CBWD3-217ENST00000621474 MIEN1Q9BRT3 115 aa8.68□□□□□ -1.02
CBWD3-217ENST00000621474 TMEM126AQ9H061 195 aa8.68□□□□□ -1.02
CBWD3-217ENST00000621474 SPANXDQ9BXN6 97 aa8.67□□□□□ -1.02
CBWD3-217ENST00000621474 SPANXCQ9NY87 97 aa8.67□□□□□ -1.02
CBWD3-217ENST00000621474 ZNF861PO60384 105 aa8.66□□□□□ -1.02
CBWD3-217ENST00000621474 OXTP01178 125 aa8.66□□□□□ -1.02
CBWD3-217ENST00000621474 TRBV10-3A0A0K0K1G6 114 aa8.65□□□□□ -1.02
CBWD3-217ENST00000621474 TRBV10-2A0A0K0K1G8 114 aa8.65□□□□□ -1.02
CBWD3-217ENST00000621474 REG3GQ6UW15 175 aa8.65□□□□□ -1.02
CBWD3-217ENST00000621474 SPANXB1Q9NS25 103 aaPredicted RBP8.65□□□□□ -1.02
CBWD3-217ENST00000621474 HERC1Q15751 4861 aa8.65□□□□□ -1.02
CBWD3-217ENST00000621474 H0Y9J4 135 aa8.65□□□□□ -1.03
CBWD3-217ENST00000621474 MT1HL1P0DM35 61 aa8.65□□□□□ -1.03
CBWD3-217ENST00000621474 PYY3Q5JQD4 70 aa8.65□□□□□ -1.03
CBWD3-217ENST00000621474 KCNQ1DNQ9H478 68 aa8.65□□□□□ -1.03
CBWD3-217ENST00000621474 IGLV6-57P01721 117 aa8.63□□□□□ -1.03
CBWD3-217ENST00000621474 SPRR1AP35321 89 aa8.63□□□□□ -1.03
CBWD3-217ENST00000621474 DIRC1Q969H9 104 aa8.63□□□□□ -1.03
CBWD3-217ENST00000621474 LINC01600Q96MT4 127 aa8.63□□□□□ -1.03
CBWD3-217ENST00000621474 KRTAP4-16G5E9R7 235 aaPredicted RBP8.62□□□□□ -1.03
CBWD3-217ENST00000621474 KRTAP1-4P0C5Y4 121 aa8.62□□□□□ -1.03
CBWD3-217ENST00000621474 COX8AP10176 69 aa8.62□□□□□ -1.03
CBWD3-217ENST00000621474 PRLHP81277 87 aa8.62□□□□□ -1.03
CBWD3-217ENST00000621474 PAM16Q9Y3D7 125 aa8.62□□□□□ -1.03
CBWD3-217ENST00000621474 PRYO14603 147 aa8.62□□□□□ -1.03
CBWD3-217ENST00000621474 DDTP30046 118 aa8.62□□□□□ -1.03
CBWD3-217ENST00000621474 RPL28P46779 137 aaKnown RBP8.61□□□□□ -1.03
CBWD3-217ENST00000621474 Q6ZVH6 145 aa8.61□□□□□ -1.03
CBWD3-217ENST00000621474 PPDPFQ9H3Y8 114 aa8.61□□□□□ -1.03
CBWD3-217ENST00000621474 IFITM1P13164 125 aa8.6□□□□□ -1.03
CBWD3-217ENST00000621474 SPATA45Q537H7 98 aa8.6□□□□□ -1.03
CBWD3-217ENST00000621474 FAM19A1Q7Z5A9 133 aa8.6□□□□□ -1.03
CBWD3-217ENST00000621474 MUSTN1Q8IVN3 82 aa8.6□□□□□ -1.03
CBWD3-217ENST00000621474 LINC00337Q8N6G1 96 aa8.6□□□□□ -1.03
CBWD3-217ENST00000621474 J3QL48 77 aa8.59□□□□□ -1.03
CBWD3-217ENST00000621474 UBE2AP49459 152 aa8.59□□□□□ -1.03
CBWD3-217ENST00000621474 C14orf144Q96I85 54 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms