RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PRLHP81277 87 aa5.1□□□□□ -1.59
COLCA1-205ENST00000620864 MSMPQ1L6U9 139 aa5.1□□□□□ -1.59
COLCA1-205ENST00000620864 CRIPTQ9P021 101 aa5.1□□□□□ -1.59
COLCA1-205ENST00000620864 TLN2Q9Y4G6 2542 aa5.09□□□□□ -1.59
COLCA1-205ENST00000620864 C10orf99Q6UWK7 81 aa5.09□□□□□ -1.59
COLCA1-205ENST00000620864 SSBP3-AS1Q7Z2R9 100 aa5.09□□□□□ -1.59
COLCA1-205ENST00000620864 MOBPQ13875 183 aa5.09□□□□□ -1.59
COLCA1-205ENST00000620864 Q6ZPA2 131 aa5.09□□□□□ -1.6
COLCA1-205ENST00000620864 WIPF1O43516 503 aa5.09□□□□□ -1.6
COLCA1-205ENST00000620864 C18orf65Q6ZTR6 163 aa5.09□□□□□ -1.6
COLCA1-205ENST00000620864 IGLV5-39A0A0G2JS06 123 aa5.08□□□□□ -1.6
COLCA1-205ENST00000620864 COX6A2Q02221 97 aa5.08□□□□□ -1.6
COLCA1-205ENST00000620864 C6orf223Q8N319 242 aa5.08□□□□□ -1.6
COLCA1-205ENST00000620864 NCOR2Q9Y618 2525 aa5.08□□□□□ -1.6
COLCA1-205ENST00000620864 CHD8Q9HCK8 2581 aa5.07□□□□□ -1.6
COLCA1-205ENST00000620864 KRTAP24-1Q3LI83 254 aa5.07□□□□□ -1.6
COLCA1-205ENST00000620864 IGKV2D-30A0A075B6S6 120 aa5.07□□□□□ -1.6
COLCA1-205ENST00000620864 IGKV2-30P06310 120 aa5.07□□□□□ -1.6
COLCA1-205ENST00000620864 C9orf116Q5BN46 136 aaPredicted RBP5.07□□□□□ -1.6
COLCA1-205ENST00000620864 CRIP3Q6Q6R5 217 aa5.07□□□□□ -1.6
COLCA1-205ENST00000620864 Q6ZQT0 140 aa5.06□□□□□ -1.6
COLCA1-205ENST00000620864 PRO0461Q9UI25 63 aa5.06□□□□□ -1.6
COLCA1-205ENST00000620864 A0A096LNJ9 63 aa5.06□□□□□ -1.6
COLCA1-205ENST00000620864 RPL37AP61513 92 aaKnown RBP5.06□□□□□ -1.6
COLCA1-205ENST00000620864 Q8NBF4 154 aa5.06□□□□□ -1.6
COLCA1-205ENST00000620864 GAS8-AS1O95177 125 aa5.05□□□□□ -1.6
COLCA1-205ENST00000620864 IGLV8-61A0A075B6I0 122 aa5.05□□□□□ -1.6
COLCA1-205ENST00000620864 KLKP1Q107X0 134 aa5.05□□□□□ -1.6
COLCA1-205ENST00000620864 FHL2Q14192 279 aa5.04□□□□□ -1.6
COLCA1-205ENST00000620864 IGLV5-45A0A087WSX0 123 aa5.04□□□□□ -1.6
COLCA1-205ENST00000620864 AVPP01185 164 aa5.04□□□□□ -1.6
COLCA1-205ENST00000620864 PCSK5Q92824 1860 aa5.04□□□□□ -1.6
COLCA1-205ENST00000620864 EP400Q96L91 3159 aa5.04□□□□□ -1.6
COLCA1-205ENST00000620864 PRR3P79522 188 aaKnown RBP5.04□□□□□ -1.6
COLCA1-205ENST00000620864 KIAA0087Q14695 138 aa5.03□□□□□ -1.6
COLCA1-205ENST00000620864 IGLV4-60A0A075B6I1 120 aa5.03□□□□□ -1.6
COLCA1-205ENST00000620864 TRBV7-4A0A0J9YYF1 115 aa5.03□□□□□ -1.6
COLCA1-205ENST00000620864 DEFB116Q30KQ4 102 aa5.03□□□□□ -1.6
COLCA1-205ENST00000620864 LINC01600Q96MT4 127 aa5.03□□□□□ -1.6
COLCA1-205ENST00000620864 RBM12B-AS1Q9P1G2 102 aa5.03□□□□□ -1.6
COLCA1-205ENST00000620864 PRR15Q8IV56 129 aa5.03□□□□□ -1.6
COLCA1-205ENST00000620864 SMCR5Q8TEV8 140 aa5.03□□□□□ -1.6
COLCA1-205ENST00000620864 MIR22HGQ0VDD5 57 aa5.02□□□□□ -1.61
COLCA1-205ENST00000620864 COA5Q86WW8 74 aa5.02□□□□□ -1.61
COLCA1-205ENST00000620864 SMCPP49901 116 aaPredicted RBP5.02□□□□□ -1.61
COLCA1-205ENST00000620864 IGF2RP11717 2491 aa5.02□□□□□ -1.61
COLCA1-205ENST00000620864 LINC00313P59037 77 aa5.01□□□□□ -1.61
COLCA1-205ENST00000620864 ACANP16112 2415 aa5.01□□□□□ -1.61
COLCA1-205ENST00000620864 LUZP6Q538Z0 58 aa5.01□□□□□ -1.61
COLCA1-205ENST00000620864 A8MUN3 132 aa5.01□□□□□ -1.61
COLCA1-205ENST00000620864 IGLV1-51P01701 117 aa5□□□□□ -1.61
COLCA1-205ENST00000620864 TM2D3Q9BRN9 247 aa5□□□□□ -1.61
COLCA1-205ENST00000620864 PIEZO2Q9H5I5 2752 aa5□□□□□ -1.61
COLCA1-205ENST00000620864 C22orf24Q9Y442 160 aa5□□□□□ -1.61
COLCA1-205ENST00000620864 A8MWP4 228 aa5□□□□□ -1.61
COLCA1-205ENST00000620864 SPACA4Q8TDM5 124 aa4.99□□□□□ -1.61
COLCA1-205ENST00000620864 USP9XQ93008 2570 aaPredicted RBP4.99□□□□□ -1.61
COLCA1-205ENST00000620864 ODF3L2Q3SX64 289 aa4.99□□□□□ -1.61
COLCA1-205ENST00000620864 FASNP49327 2511 aaKnown RBP4.99□□□□□ -1.61
COLCA1-205ENST00000620864 IGHV3OR16-9A0A0B4J2B5 98 aa4.98□□□□□ -1.61
COLCA1-205ENST00000620864 Q6ZRX8 168 aa4.98□□□□□ -1.61
COLCA1-205ENST00000620864 SPANXA2-OT1Q8N9U9 137 aa4.98□□□□□ -1.61
COLCA1-205ENST00000620864 C16orf95Q9H693 158 aa4.98□□□□□ -1.61
COLCA1-205ENST00000620864 LYPD5Q6UWN5 251 aa4.98□□□□□ -1.61
COLCA1-205ENST00000620864 SMR3BP02814 79 aaPredicted RBP4.98□□□□□ -1.61
COLCA1-205ENST00000620864 Q6ZRU5 148 aa4.98□□□□□ -1.61
COLCA1-205ENST00000620864 A0A1W2PPR1 153 aa4.97□□□□□ -1.61
COLCA1-205ENST00000620864 KIF25-AS1Q9Y6Z4 181 aa4.97□□□□□ -1.61
COLCA1-205ENST00000620864 H3BNG1 76 aa4.97□□□□□ -1.61
COLCA1-205ENST00000620864 CDC42SE1Q9NRR8 79 aa4.97□□□□□ -1.61
COLCA1-205ENST00000620864 LINC01554Q52M75 96 aa4.97□□□□□ -1.61
COLCA1-205ENST00000620864 LINC00476Q8WZB0 136 aa4.97□□□□□ -1.61
COLCA1-205ENST00000620864 GVQW2A0A096LPI5 108 aaPredicted RBP4.95□□□□□ -1.62
COLCA1-205ENST00000620864 MRPL34Q9BQ48 92 aaKnown RBP4.95□□□□□ -1.62
COLCA1-205ENST00000620864 A8MTW9 85 aa4.94□□□□□ -1.62
COLCA1-205ENST00000620864 FHL3Q13643 280 aa4.94□□□□□ -1.62
COLCA1-205ENST00000620864 LINC00167Q96N53 147 aa4.94□□□□□ -1.62
COLCA1-205ENST00000620864 FAM218AQ96MZ4 157 aa4.93□□□□□ -1.62
COLCA1-205ENST00000620864 Q6ZRP5 223 aa4.93□□□□□ -1.62
COLCA1-205ENST00000620864 MUC22E2RYF6 1773 aaPredicted RBP4.93□□□□□ -1.62
COLCA1-205ENST00000620864 POLQO75417 2590 aa4.92□□□□□ -1.62
COLCA1-205ENST00000620864 TYMSOSQ8TAI1 123 aa4.92□□□□□ -1.62
COLCA1-205ENST00000620864 A0A0A0MQY5 61 aa4.92□□□□□ -1.62
COLCA1-205ENST00000620864 Q1T7F1 81 aa4.91□□□□□ -1.62
COLCA1-205ENST00000620864 MTORP42345 2549 aa4.91□□□□□ -1.62
COLCA1-205ENST00000620864 IGLV6-57P01721 117 aa4.91□□□□□ -1.62
COLCA1-205ENST00000620864 H7BZZ5 65 aa4.91□□□□□ -1.62
COLCA1-205ENST00000620864 SETD2Q9BYW2 2564 aaPredicted RBP4.91□□□□□ -1.62
COLCA1-205ENST00000620864 LINC00315P59091 139 aa4.88□□□□□ -1.63
COLCA1-205ENST00000620864 APLNQ9ULZ1 77 aa4.88□□□□□ -1.63
COLCA1-205ENST00000620864 K7EQZ3 153 aa4.88□□□□□ -1.63
COLCA1-205ENST00000620864 ZNF575Q86XF7 245 aa4.88□□□□□ -1.63
COLCA1-205ENST00000620864 CASC10Q5T4H9 136 aa4.87□□□□□ -1.63
COLCA1-205ENST00000620864 ST20-AS1Q8NBB2 130 aa4.87□□□□□ -1.63
COLCA1-205ENST00000620864 RTL8CO15255 209 aa4.86□□□□□ -1.63
COLCA1-205ENST00000620864 Q96NJ1 140 aa4.86□□□□□ -1.63
COLCA1-205ENST00000620864 LINC00483Q53H64 154 aa4.85□□□□□ -1.63
COLCA1-205ENST00000620864 C8orf17Q9NRJ1 99 aa4.85□□□□□ -1.63
COLCA1-205ENST00000620864 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
COLCA1-205ENST00000620864 A0A1B0GVX0 72 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms