RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 DHRS4-AS1Q9P1J3 65 aa3.51□□□□□ -1.85
VPS13D-214ENST00000620676 KPRPQ5T749 579 aaPredicted RBP3.51□□□□□ -1.85
VPS13D-214ENST00000620676 ST20-AS1Q8NBB2 130 aa3.51□□□□□ -1.85
VPS13D-214ENST00000620676 X6R8D5 127 aa3.51□□□□□ -1.85
VPS13D-214ENST00000620676 CHD6Q8TD26 2715 aa3.51□□□□□ -1.85
VPS13D-214ENST00000620676 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.5□□□□□ -1.85
VPS13D-214ENST00000620676 SYCNQ0VAF6 134 aa3.5□□□□□ -1.85
VPS13D-214ENST00000620676 CENPEQ02224 2701 aa3.5□□□□□ -1.85
VPS13D-214ENST00000620676 HELZ2Q9BYK8 2649 aaKnown RBP3.5□□□□□ -1.85
VPS13D-214ENST00000620676 PRR15Q8IV56 129 aa3.5□□□□□ -1.85
VPS13D-214ENST00000620676 ADORA2A-AS1P86434 159 aa3.5□□□□□ -1.85
VPS13D-214ENST00000620676 BAHCC1Q9P281 2608 aa3.5□□□□□ -1.85
VPS13D-214ENST00000620676 PRO0255Q9UI72 69 aa3.5□□□□□ -1.85
VPS13D-214ENST00000620676 FBXL19-AS1Q494R0 122 aa3.5□□□□□ -1.85
VPS13D-214ENST00000620676 USP24Q9UPU5 2620 aa3.49□□□□□ -1.85
VPS13D-214ENST00000620676 LMO4P61968 165 aa3.49□□□□□ -1.85
VPS13D-214ENST00000620676 K7ERS5 55 aa3.49□□□□□ -1.85
VPS13D-214ENST00000620676 KTN1-AS1Q86SY8 53 aa3.49□□□□□ -1.85
VPS13D-214ENST00000620676 C8orf87E5RJ46 101 aa3.49□□□□□ -1.85
VPS13D-214ENST00000620676 COX17Q14061 63 aa3.49□□□□□ -1.85
VPS13D-214ENST00000620676 LOC110117498A0A087WWA1 95 aa3.49□□□□□ -1.85
VPS13D-214ENST00000620676 ATP11AUNQ6ZP68 121 aa3.49□□□□□ -1.85
VPS13D-214ENST00000620676 Q8IZM0 81 aa3.49□□□□□ -1.85
VPS13D-214ENST00000620676 NOTCH1P46531 2555 aa3.49□□□□□ -1.85
VPS13D-214ENST00000620676 PRLHP81277 87 aa3.49□□□□□ -1.85
VPS13D-214ENST00000620676 C7orf65Q6ZTY9 151 aa3.48□□□□□ -1.85
VPS13D-214ENST00000620676 FP248Q71RG6 208 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-214ENST00000620676 COA5Q86WW8 74 aa3.48□□□□□ -1.85
VPS13D-214ENST00000620676 M0R2N4 97 aa3.48□□□□□ -1.85
VPS13D-214ENST00000620676 SSBP3-AS1Q7Z2R9 100 aa3.48□□□□□ -1.85
VPS13D-214ENST00000620676 Q9BRP9 147 aa3.48□□□□□ -1.85
VPS13D-214ENST00000620676 C11orf45Q8TAV5 145 aa3.48□□□□□ -1.85
VPS13D-214ENST00000620676 A0A1B0GW54 56 aa3.48□□□□□ -1.85
VPS13D-214ENST00000620676 CEP350Q5VT06 3117 aa3.48□□□□□ -1.85
VPS13D-214ENST00000620676 SPINT4Q6UDR6 99 aa3.47□□□□□ -1.85
VPS13D-214ENST00000620676 C9orf66Q5T8R8 295 aa3.46□□□□□ -1.86
VPS13D-214ENST00000620676 ZNF702PQ9H963 129 aa3.46□□□□□ -1.86
VPS13D-214ENST00000620676 hDV103S1A0JD37 113 aa3.46□□□□□ -1.86
VPS13D-214ENST00000620676 OXLD1Q5BKU9 147 aa3.45□□□□□ -1.86
VPS13D-214ENST00000620676 FAM168BA1KXE4 195 aa3.45□□□□□ -1.86
VPS13D-214ENST00000620676 ZNF575Q86XF7 245 aa3.45□□□□□ -1.86
VPS13D-214ENST00000620676 IGLV1-40P01703 118 aa3.45□□□□□ -1.86
VPS13D-214ENST00000620676 REG3GQ6UW15 175 aa3.45□□□□□ -1.86
VPS13D-214ENST00000620676 LCA10Q71F78 164 aa3.45□□□□□ -1.86
VPS13D-214ENST00000620676 AKAP13Q12802 2813 aa3.45□□□□□ -1.86
VPS13D-214ENST00000620676 IGKV2D-30A0A075B6S6 120 aa3.45□□□□□ -1.86
VPS13D-214ENST00000620676 IGKV2-30P06310 120 aa3.45□□□□□ -1.86
VPS13D-214ENST00000620676 IGLV5-45A0A087WSX0 123 aa3.45□□□□□ -1.86
VPS13D-214ENST00000620676 AVPP01185 164 aa3.44□□□□□ -1.86
VPS13D-214ENST00000620676 A0A1B0GU69 56 aa3.44□□□□□ -1.86
VPS13D-214ENST00000620676 IGHV3OR16-9A0A0B4J2B5 98 aa3.44□□□□□ -1.86
VPS13D-214ENST00000620676 K7EQZ3 153 aa3.44□□□□□ -1.86
VPS13D-214ENST00000620676 PLA2G2CQ5R387 149 aa3.44□□□□□ -1.86
VPS13D-214ENST00000620676 IGFL2Q6UWQ7 119 aa3.44□□□□□ -1.86
VPS13D-214ENST00000620676 TRBV7-4A0A0J9YYF1 115 aa3.44□□□□□ -1.86
VPS13D-214ENST00000620676 CIRBP-AS1Q8TBR5 109 aa3.44□□□□□ -1.86
VPS13D-214ENST00000620676 A0A0C4DFX4 3053 aa3.43□□□□□ -1.86
VPS13D-214ENST00000620676 COL6A5A8TX70 2615 aa3.43□□□□□ -1.86
VPS13D-214ENST00000620676 C14orf177Q52M58 125 aa3.43□□□□□ -1.86
VPS13D-214ENST00000620676 C6orf48Q9UBA6 75 aa3.43□□□□□ -1.86
VPS13D-214ENST00000620676 Q6ZTC4 211 aa3.43□□□□□ -1.86
VPS13D-214ENST00000620676 KLKP1Q107X0 134 aa3.43□□□□□ -1.86
VPS13D-214ENST00000620676 C7orf33Q8WU49 177 aa3.42□□□□□ -1.86
VPS13D-214ENST00000620676 Q8NA96 180 aa3.42□□□□□ -1.86
VPS13D-214ENST00000620676 Q6ZRP5 223 aa3.42□□□□□ -1.86
VPS13D-214ENST00000620676 UNC79Q9P2D8 2635 aa3.42□□□□□ -1.86
VPS13D-214ENST00000620676 ODF3L2Q3SX64 289 aa3.42□□□□□ -1.86
VPS13D-214ENST00000620676 C11orf71Q6IPW1 123 aa3.42□□□□□ -1.86
VPS13D-214ENST00000620676 PCSK5Q92824 1860 aa3.42□□□□□ -1.86
VPS13D-214ENST00000620676 Q6YL49 198 aa3.42□□□□□ -1.86
VPS13D-214ENST00000620676 BCE1O60756 84 aa3.42□□□□□ -1.86
VPS13D-214ENST00000620676 Q6ZRU5 148 aa3.42□□□□□ -1.86
VPS13D-214ENST00000620676 CFAP46Q8IYW2 2715 aa3.41□□□□□ -1.86
VPS13D-214ENST00000620676 ITPR3Q14573 2671 aa3.41□□□□□ -1.86
VPS13D-214ENST00000620676 LELP1Q5T871 98 aa3.41□□□□□ -1.86
VPS13D-214ENST00000620676 IGLV1-51P01701 117 aa3.41□□□□□ -1.86
VPS13D-214ENST00000620676 MGAM2Q2M2H8 2515 aa3.41□□□□□ -1.86
VPS13D-214ENST00000620676 NBEAL1Q6ZS30 2694 aa3.41□□□□□ -1.86
VPS13D-214ENST00000620676 ZNF292O60281 2723 aa3.4□□□□□ -1.86
VPS13D-214ENST00000620676 EGFEM1PQ0D2K5 195 aa3.4□□□□□ -1.86
VPS13D-214ENST00000620676 Q1T7F1 81 aa3.4□□□□□ -1.86
VPS13D-214ENST00000620676 OBSCN-AS1Q96MR7 158 aa3.4□□□□□ -1.86
VPS13D-214ENST00000620676 ERC2-IT1O76042 136 aa3.4□□□□□ -1.86
VPS13D-214ENST00000620676 LOC101927531A0A1B0GV80 90 aa3.4□□□□□ -1.87
VPS13D-214ENST00000620676 PRO3102Q9H379 93 aa3.4□□□□□ -1.87
VPS13D-214ENST00000620676 MAP1AP78559 2803 aaPredicted RBP3.4□□□□□ -1.87
VPS13D-214ENST00000620676 LINC01600Q96MT4 127 aa3.4□□□□□ -1.87
VPS13D-214ENST00000620676 TRANK1O15050 2925 aa3.4□□□□□ -1.87
VPS13D-214ENST00000620676 DEFB131BA0A096LNP1 70 aa3.39□□□□□ -1.87
VPS13D-214ENST00000620676 LINC00313P59037 77 aa3.39□□□□□ -1.87
VPS13D-214ENST00000620676 C22orf24Q9Y442 160 aa3.39□□□□□ -1.87
VPS13D-214ENST00000620676 CRIPTQ9P021 101 aa3.39□□□□□ -1.87
VPS13D-214ENST00000620676 CHTF8P0CG12 524 aa3.39□□□□□ -1.87
VPS13D-214ENST00000620676 MOBPQ13875 183 aa3.38□□□□□ -1.87
VPS13D-214ENST00000620676 UTP20O75691 2785 aaKnown RBP3.38□□□□□ -1.87
VPS13D-214ENST00000620676 A8MU10 97 aa3.38□□□□□ -1.87
VPS13D-214ENST00000620676 ELOF1P60002 83 aaKnown RBP3.38□□□□□ -1.87
VPS13D-214ENST00000620676 IGLV6-57P01721 117 aa3.38□□□□□ -1.87
VPS13D-214ENST00000620676 LINC00476Q8WZB0 136 aa3.38□□□□□ -1.87
VPS13D-214ENST00000620676 DMBT1Q9UGM3 2413 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms