RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 NDUFC2-KCTD14E9PQ53 114 aa5.17□□□□□ -1.58
CPNE3-209ENST00000620393 HNRNPA3P51991 378 aaKnown RBP5.17□□□□□ -1.58
CPNE3-209ENST00000620393 PTTG1IPP53801 180 aa5.17□□□□□ -1.58
CPNE3-209ENST00000620393 SRSF9Q13242 221 aaKnown RBP eCLIP5.17□□□□□ -1.58
CPNE3-209ENST00000620393 SDIM1Q6ZPB5 146 aa5.17□□□□□ -1.58
CPNE3-209ENST00000620393 MIR7-3HGQ8N6C7 128 aa5.17□□□□□ -1.58
CPNE3-209ENST00000620393 SPANXDQ9BXN6 97 aa5.17□□□□□ -1.58
CPNE3-209ENST00000620393 SPANXCQ9NY87 97 aa5.17□□□□□ -1.58
CPNE3-209ENST00000620393 FRAS1Q86XX4 4008 aa5.17□□□□□ -1.58
CPNE3-209ENST00000620393 IGLV5-52A0A0A0MRZ9 124 aa5.16□□□□□ -1.58
CPNE3-209ENST00000620393 LOC107984156A0A0G2JMH3 177 aa5.16□□□□□ -1.58
CPNE3-209ENST00000620393 IFITM1P13164 125 aa5.16□□□□□ -1.58
CPNE3-209ENST00000620393 FUSP35637 526 aaKnown RBP eCLIP5.16□□□□□ -1.58
CPNE3-209ENST00000620393 KRTAP10-2P60368 255 aa5.16□□□□□ -1.58
CPNE3-209ENST00000620393 TAL2Q16559 108 aa5.16□□□□□ -1.58
CPNE3-209ENST00000620393 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
CPNE3-209ENST00000620393 Q6ZRP5 223 aa5.16□□□□□ -1.58
CPNE3-209ENST00000620393 ARL17AQ8IVW1 177 aa5.16□□□□□ -1.58
CPNE3-209ENST00000620393 DAND5Q8N907 189 aa5.16□□□□□ -1.58
CPNE3-209ENST00000620393 HIST1H4GQ99525 98 aa5.16□□□□□ -1.58
CPNE3-209ENST00000620393 SND1-IT1Q9HBX3 110 aa5.16□□□□□ -1.58
CPNE3-209ENST00000620393 FAT2Q9NYQ8 4349 aa5.16□□□□□ -1.58
CPNE3-209ENST00000620393 DDTP30046 118 aa5.15□□□□□ -1.59
CPNE3-209ENST00000620393 CTAG1AP78358 180 aa5.15□□□□□ -1.59
CPNE3-209ENST00000620393 GAGE2BQ13066 116 aa5.15□□□□□ -1.59
CPNE3-209ENST00000620393 GAGE2EQ4V326 116 aa5.15□□□□□ -1.59
CPNE3-209ENST00000620393 MUSTN1Q8IVN3 82 aa5.15□□□□□ -1.59
CPNE3-209ENST00000620393 LINC00308Q8TCZ7 52 aa5.15□□□□□ -1.59
CPNE3-209ENST00000620393 PPDPFQ9H3Y8 114 aa5.15□□□□□ -1.59
CPNE3-209ENST00000620393 GAGE2DQ9UEU5 116 aa5.15□□□□□ -1.59
CPNE3-209ENST00000620393 PKIGQ9Y2B9 76 aa5.15□□□□□ -1.59
CPNE3-209ENST00000620393 DNAH11Q96DT5 4516 aa5.15□□□□□ -1.59
CPNE3-209ENST00000620393 A0A1B0GVY2 172 aa5.14□□□□□ -1.59
CPNE3-209ENST00000620393 C16orf90A8MZG2 172 aa5.14□□□□□ -1.59
CPNE3-209ENST00000620393 GCSHP23434 173 aa5.14□□□□□ -1.59
CPNE3-209ENST00000620393 RPL18AQ02543 176 aaKnown RBP5.14□□□□□ -1.59
CPNE3-209ENST00000620393 HSD52Q0P140 79 aa5.14□□□□□ -1.59
CPNE3-209ENST00000620393 LINC01620Q4KN68 170 aa5.14□□□□□ -1.59
CPNE3-209ENST00000620393 SOSTDC1Q6X4U4 206 aa5.14□□□□□ -1.59
CPNE3-209ENST00000620393 COPS9Q8WXC6 57 aa5.14□□□□□ -1.59
CPNE3-209ENST00000620393 XAGE1AQ9HD64 81 aa5.14□□□□□ -1.59
CPNE3-209ENST00000620393 NPC2P61916 151 aa5.13□□□□□ -1.59
CPNE3-209ENST00000620393 CEND1Q8N111 149 aa5.13□□□□□ -1.59
CPNE3-209ENST00000620393 LINC00474Q9P2X8 69 aa5.13□□□□□ -1.59
CPNE3-209ENST00000620393 A0A096LNI7 61 aa5.12□□□□□ -1.59
CPNE3-209ENST00000620393 PCP4L1A6NKN8 68 aa5.12□□□□□ -1.59
CPNE3-209ENST00000620393 RPL24P83731 157 aaKnown RBP5.12□□□□□ -1.59
CPNE3-209ENST00000620393 C9orf129Q5T035 196 aaKnown RBP5.12□□□□□ -1.59
CPNE3-209ENST00000620393 HECTD4Q9Y4D8 3996 aa5.12□□□□□ -1.59
CPNE3-209ENST00000620393 IGKV2-24A0A0C4DH68 120 aa5.11□□□□□ -1.59
CPNE3-209ENST00000620393 A4D1N5 150 aa5.11□□□□□ -1.59
CPNE3-209ENST00000620393 NDUFC2O95298 119 aa5.11□□□□□ -1.59
CPNE3-209ENST00000620393 BVES-AS1Q5T3Y7 98 aa5.11□□□□□ -1.59
CPNE3-209ENST00000620393 DPH3Q96FX2 82 aa5.11□□□□□ -1.59
CPNE3-209ENST00000620393 PLA2G2DQ9UNK4 145 aa5.11□□□□□ -1.59
CPNE3-209ENST00000620393 RYR3Q15413 4870 aa5.11□□□□□ -1.59
CPNE3-209ENST00000620393 A0A1W2PNN7 141 aa5.1□□□□□ -1.59
CPNE3-209ENST00000620393 M0R143 59 aa5.1□□□□□ -1.59
CPNE3-209ENST00000620393 CHTF8P0CG12 524 aa5.1□□□□□ -1.59
CPNE3-209ENST00000620393 HINT1P49773 126 aaPredicted RBP5.1□□□□□ -1.59
CPNE3-209ENST00000620393 FXYD2P54710 66 aa5.1□□□□□ -1.59
CPNE3-209ENST00000620393 KRTAP10-1P60331 282 aa5.1□□□□□ -1.59
CPNE3-209ENST00000620393 Q8NDZ9 215 aa5.1□□□□□ -1.59
CPNE3-209ENST00000620393 EPM2AB3EWF7 344 aa5.09□□□□□ -1.59
CPNE3-209ENST00000620393 PANO1I0J062 215 aa5.09□□□□□ -1.59
CPNE3-209ENST00000620393 VPREB1P12018 145 aa5.09□□□□□ -1.59
CPNE3-209ENST00000620393 PRR3P79522 188 aaKnown RBP5.09□□□□□ -1.59
CPNE3-209ENST00000620393 SERTAD4-AS1Q5TG53 156 aa5.09□□□□□ -1.59
CPNE3-209ENST00000620393 KRTAP7-1Q8IUC3 87 aa5.09□□□□□ -1.59
CPNE3-209ENST00000620393 SPACA4Q8TDM5 124 aa5.09□□□□□ -1.59
CPNE3-209ENST00000620393 DNAH5Q8TE73 4624 aa5.09□□□□□ -1.59
CPNE3-209ENST00000620393 PKD1P98161 4303 aa5.09□□□□□ -1.59
CPNE3-209ENST00000620393 IGLV5-37A0A075B6J1 123 aa5.08□□□□□ -1.6
CPNE3-209ENST00000620393 IGKV2-28A0A075B6P5 120 aa5.08□□□□□ -1.6
CPNE3-209ENST00000620393 TRBV10-2A0A0K0K1G8 114 aa5.08□□□□□ -1.6
CPNE3-209ENST00000620393 FAM168BA1KXE4 195 aa5.08□□□□□ -1.6
CPNE3-209ENST00000620393 IGKV2D-28P01615 120 aa5.08□□□□□ -1.6
CPNE3-209ENST00000620393 CFC1BP0CG36 223 aa5.08□□□□□ -1.6
CPNE3-209ENST00000620393 CFC1P0CG37 223 aa5.08□□□□□ -1.6
CPNE3-209ENST00000620393 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
CPNE3-209ENST00000620393 FAM30AQ9NZY2 134 aa5.08□□□□□ -1.6
CPNE3-209ENST00000620393 C22orf24Q9Y442 160 aa5.08□□□□□ -1.6
CPNE3-209ENST00000620393 A0A087WYN8 130 aa5.07□□□□□ -1.6
CPNE3-209ENST00000620393 A0A1B0GWB2 263 aa5.07□□□□□ -1.6
CPNE3-209ENST00000620393 M0R378 163 aa5.07□□□□□ -1.6
CPNE3-209ENST00000620393 Q6ZSA8 131 aa5.07□□□□□ -1.6
CPNE3-209ENST00000620393 DNAH8Q96JB1 4490 aa5.06□□□□□ -1.6
CPNE3-209ENST00000620393 TRAV13-2A0A0B4J235 113 aa5.06□□□□□ -1.6
CPNE3-209ENST00000620393 A0A0B4J2C4 111 aa5.06□□□□□ -1.6
CPNE3-209ENST00000620393 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
CPNE3-209ENST00000620393 FAM19A5Q7Z5A7 132 aaPredicted RBP5.06□□□□□ -1.6
CPNE3-209ENST00000620393 NKAPP1Q8N9T2 125 aa5.06□□□□□ -1.6
CPNE3-209ENST00000620393 SNHG12Q9BXW3 62 aa5.06□□□□□ -1.6
CPNE3-209ENST00000620393 NHP2Q9NX24 153 aaKnown RBP5.06□□□□□ -1.6
CPNE3-209ENST00000620393 PLAC8Q9NZF1 115 aa5.06□□□□□ -1.6
CPNE3-209ENST00000620393 A6NDN8 102 aa5.05□□□□□ -1.6
CPNE3-209ENST00000620393 NCR3O14931 201 aa5.05□□□□□ -1.6
CPNE3-209ENST00000620393 BATFQ16520 125 aa5.05□□□□□ -1.6
CPNE3-209ENST00000620393 LBHQ53QV2 105 aaPredicted RBP5.05□□□□□ -1.6
CPNE3-209ENST00000620393 MRPL55Q7Z7F7 128 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms