RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 J3KT08 172 aa13.79□□□□□ -0.2
NEK3-208ENST00000618534 KMT2BQ9UMN6 2715 aaPredicted RBP13.78□□□□□ -0.2
NEK3-208ENST00000618534 HTN3P15516 51 aa13.78□□□□□ -0.2
NEK3-208ENST00000618534 TRAV23DV6A0A075B6W5 121 aa13.78□□□□□ -0.2
NEK3-208ENST00000618534 ZNF561-AS1K7EIQ3 104 aa13.78□□□□□ -0.2
NEK3-208ENST00000618534 Q6ZQT0 140 aa13.78□□□□□ -0.2
NEK3-208ENST00000618534 A0A0J9YWU9 116 aa13.77□□□□□ -0.21
NEK3-208ENST00000618534 IGLV6-57P01721 117 aa13.77□□□□□ -0.21
NEK3-208ENST00000618534 IGHV4-30-4P0DP06 118 aa13.77□□□□□ -0.21
NEK3-208ENST00000618534 RBM3P98179 157 aaKnown RBP13.77□□□□□ -0.21
NEK3-208ENST00000618534 HIVEP2P31629 2446 aa13.77□□□□□ -0.21
NEK3-208ENST00000618534 C9orf66Q5T8R8 295 aa13.76□□□□□ -0.21
NEK3-208ENST00000618534 KLK12Q9UKR0 248 aa13.76□□□□□ -0.21
NEK3-208ENST00000618534 LAMTOR3Q9UHA4 124 aa13.76□□□□□ -0.21
NEK3-208ENST00000618534 GHRHP01286 108 aa13.75□□□□□ -0.21
NEK3-208ENST00000618534 LELP1Q5T871 98 aa13.75□□□□□ -0.21
NEK3-208ENST00000618534 Q8NAQ8 132 aa13.75□□□□□ -0.21
NEK3-208ENST00000618534 APOC4P55056 127 aa13.75□□□□□ -0.21
NEK3-208ENST00000618534 M0R2N4 97 aa13.74□□□□□ -0.21
NEK3-208ENST00000618534 MUC7Q8TAX7 377 aa13.74□□□□□ -0.21
NEK3-208ENST00000618534 LOC110117498A0A087WWA1 95 aa13.73□□□□□ -0.21
NEK3-208ENST00000618534 TMEM258P61165 79 aa13.73□□□□□ -0.21
NEK3-208ENST00000618534 PRR34Q9NV39 138 aa13.73□□□□□ -0.21
NEK3-208ENST00000618534 Q6ZQY7 126 aa13.73□□□□□ -0.21
NEK3-208ENST00000618534 TRBV10-3A0A0K0K1G6 114 aa13.72□□□□□ -0.21
NEK3-208ENST00000618534 XAGE1AQ9HD64 81 aa13.71□□□□□ -0.22
NEK3-208ENST00000618534 C6orf48Q9UBA6 75 aa13.7□□□□□ -0.22
NEK3-208ENST00000618534 MIFP14174 115 aa13.7□□□□□ -0.22
NEK3-208ENST00000618534 RPS28P62857 69 aaKnown RBP13.69□□□□□ -0.22
NEK3-208ENST00000618534 UNC79Q9P2D8 2635 aa13.69□□□□□ -0.22
NEK3-208ENST00000618534 SPART-AS1P0CW21 52 aa13.69□□□□□ -0.22
NEK3-208ENST00000618534 FAM19A5Q7Z5A7 132 aaPredicted RBP13.69□□□□□ -0.22
NEK3-208ENST00000618534 GVQW2A0A096LPI5 108 aaPredicted RBP13.68□□□□□ -0.22
NEK3-208ENST00000618534 DPH3Q96FX2 82 aa13.68□□□□□ -0.22
NEK3-208ENST00000618534 DSCR8Q96T75 97 aa13.67□□□□□ -0.22
NEK3-208ENST00000618534 DIRC1Q969H9 104 aa13.66□□□□□ -0.22
NEK3-208ENST00000618534 FASNP49327 2511 aaKnown RBP13.66□□□□□ -0.22
NEK3-208ENST00000618534 LINC01547P58512 204 aaPredicted RBP13.65□□□□□ -0.22
NEK3-208ENST00000618534 Q6ZVQ6 151 aa13.65□□□□□ -0.22
NEK3-208ENST00000618534 TENM1Q9UKZ4 2725 aa13.65□□□□□ -0.22
NEK3-208ENST00000618534 HAMPP81172 84 aa13.64□□□□□ -0.23
NEK3-208ENST00000618534 HELZ2Q9BYK8 2649 aaKnown RBP13.63□□□□□ -0.23
NEK3-208ENST00000618534 ZNF73O43830 326 aaPredicted RBP13.62□□□□□ -0.23
NEK3-208ENST00000618534 HIGD2BQ4VC39 106 aa13.61□□□□□ -0.23
NEK3-208ENST00000618534 OXTP01178 125 aa13.61□□□□□ -0.23
NEK3-208ENST00000618534 C20orf197Q8N268 126 aa13.61□□□□□ -0.23
NEK3-208ENST00000618534 COX7BP24311 80 aa13.6□□□□□ -0.23
NEK3-208ENST00000618534 HIVEP1P15822 2718 aa13.6□□□□□ -0.23
NEK3-208ENST00000618534 H3BQ85 93 aa13.6□□□□□ -0.23
NEK3-208ENST00000618534 PDE6GP18545 87 aa13.59□□□□□ -0.23
NEK3-208ENST00000618534 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.59□□□□□ -0.23
NEK3-208ENST00000618534 ELOF1P60002 83 aaKnown RBP13.58□□□□□ -0.24
NEK3-208ENST00000618534 NOTCH2Q04721 2471 aa13.58□□□□□ -0.24
NEK3-208ENST00000618534 VPREB1P12018 145 aa13.57□□□□□ -0.24
NEK3-208ENST00000618534 WFDC10BQ8IUB3 73 aa13.57□□□□□ -0.24
NEK3-208ENST00000618534 CAMK2N2Q96S95 79 aa13.57□□□□□ -0.24
NEK3-208ENST00000618534 TRBV7-4A0A0J9YYF1 115 aa13.56□□□□□ -0.24
NEK3-208ENST00000618534 TRAV10A0A0B4J240 114 aa13.54□□□□□ -0.24
NEK3-208ENST00000618534 TRAV7A0A075B6U4 112 aa13.54□□□□□ -0.24
NEK3-208ENST00000618534 NDUFC2-KCTD14E9PQ53 114 aa13.54□□□□□ -0.24
NEK3-208ENST00000618534 CXCL6P80162 114 aa13.54□□□□□ -0.24
NEK3-208ENST00000618534 INAFM1C9JVW0 142 aa13.53□□□□□ -0.24
NEK3-208ENST00000618534 Q6ZRU5 148 aa13.53□□□□□ -0.24
NEK3-208ENST00000618534 BCE1O60756 84 aa13.52□□□□□ -0.24
NEK3-208ENST00000618534 KRTAP26-1Q6PEX3 210 aa13.52□□□□□ -0.24
NEK3-208ENST00000618534 SCXQ7RTU7 201 aa13.52□□□□□ -0.24
NEK3-208ENST00000618534 TRBV7-6A0A0J9YX20 115 aa13.51□□□□□ -0.25
NEK3-208ENST00000618534 J3QKU1 62 aa13.51□□□□□ -0.25
NEK3-208ENST00000618534 EGFEM1PQ0D2K5 195 aa13.51□□□□□ -0.25
NEK3-208ENST00000618534 M0R378 163 aa13.5□□□□□ -0.25
NEK3-208ENST00000618534 TRRAPQ9Y4A5 3859 aa13.5□□□□□ -0.25
NEK3-208ENST00000618534 ATRQ13535 2644 aa13.5□□□□□ -0.25
NEK3-208ENST00000618534 C15orf56Q8N910 161 aa13.5□□□□□ -0.25
NEK3-208ENST00000618534 KPRPQ5T749 579 aaPredicted RBP13.49□□□□□ -0.25
NEK3-208ENST00000618534 NSD1Q96L73 2696 aaPredicted RBP13.48□□□□□ -0.25
NEK3-208ENST00000618534 LINC00528Q8N1L1 170 aa13.48□□□□□ -0.25
NEK3-208ENST00000618534 OTOGQ6ZRI0 2925 aa13.48□□□□□ -0.25
NEK3-208ENST00000618534 RETNQ9HD89 108 aa13.47□□□□□ -0.25
NEK3-208ENST00000618534 FAM236DA0A1B0GTK5 79 aa13.45□□□□□ -0.26
NEK3-208ENST00000618534 H7BZZ5 65 aa13.45□□□□□ -0.26
NEK3-208ENST00000618534 FAM236CP0DP71 79 aa13.45□□□□□ -0.26
NEK3-208ENST00000618534 TEP1Q99973 2627 aaKnown RBP13.45□□□□□ -0.26
NEK3-208ENST00000618534 C5orf47Q569G3 176 aa13.43□□□□□ -0.26
NEK3-208ENST00000618534 Q6ZRP5 223 aa13.43□□□□□ -0.26
NEK3-208ENST00000618534 SNURFQ9Y675 71 aa13.43□□□□□ -0.26
NEK3-208ENST00000618534 KLKP1Q107X0 134 aa13.42□□□□□ -0.26
NEK3-208ENST00000618534 Q6ZTC4 211 aa13.42□□□□□ -0.26
NEK3-208ENST00000618534 HECTD1Q9ULT8 2610 aa13.42□□□□□ -0.26
NEK3-208ENST00000618534 H3BNG1 76 aa13.41□□□□□ -0.26
NEK3-208ENST00000618534 RMI2Q96E14 147 aa13.41□□□□□ -0.26
NEK3-208ENST00000618534 TM2D3Q9BRN9 247 aa13.41□□□□□ -0.26
NEK3-208ENST00000618534 WIPF1O43516 503 aa13.4□□□□□ -0.26
NEK3-208ENST00000618534 ESRGQ1W209 222 aa13.4□□□□□ -0.26
NEK3-208ENST00000618534 Q5XG85 94 aa13.4□□□□□ -0.26
NEK3-208ENST00000618534 PKD1L1Q8TDX9 2849 aa13.39□□□□□ -0.27
NEK3-208ENST00000618534 C1orf43Q9BWL3 253 aa13.39□□□□□ -0.27
NEK3-208ENST00000618534 C4orf26Q17RF5 130 aa13.38□□□□□ -0.27
NEK3-208ENST00000618534 IGKV2D-24A0A075B6R9 120 aa13.37□□□□□ -0.27
NEK3-208ENST00000618534 Q8N9L7 120 aa13.37□□□□□ -0.27
NEK3-208ENST00000618534 F8WEM9 126 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms