RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 FAM19A2Q8N3H0 131 aa13.2□□□□□ -0.3
ARHGEF1-223ENST00000617585 TMEM126AQ9H061 195 aa13.2□□□□□ -0.3
ARHGEF1-223ENST00000617585 LINC00310P59036 64 aa13.18□□□□□ -0.3
ARHGEF1-223ENST00000617585 M0R378 163 aa13.17□□□□□ -0.3
ARHGEF1-223ENST00000617585 LINC00158P58513 81 aa13.17□□□□□ -0.3
ARHGEF1-223ENST00000617585 FAM229BQ4G0N7 80 aa13.17□□□□□ -0.3
ARHGEF1-223ENST00000617585 TMEM238C9JI98 176 aa13.15□□□□□ -0.3
ARHGEF1-223ENST00000617585 HERV-K104P63124 156 aa13.15□□□□□ -0.3
ARHGEF1-223ENST00000617585 LEPROTL1O95214 131 aa13.14□□□□□ -0.31
ARHGEF1-223ENST00000617585 FAM19A1Q7Z5A9 133 aa13.14□□□□□ -0.31
ARHGEF1-223ENST00000617585 TYMSOSQ8TAI1 123 aa13.14□□□□□ -0.31
ARHGEF1-223ENST00000617585 SERF1AO75920 110 aa13.13□□□□□ -0.31
ARHGEF1-223ENST00000617585 KRTAP13-2Q52LG2 175 aa13.13□□□□□ -0.31
ARHGEF1-223ENST00000617585 LINC00587B1AMM8 73 aa13.12□□□□□ -0.31
ARHGEF1-223ENST00000617585 SMIM13P0DJ93 91 aa13.12□□□□□ -0.31
ARHGEF1-223ENST00000617585 PRLHP81277 87 aa13.12□□□□□ -0.31
ARHGEF1-223ENST00000617585 ANAPC11Q9NYG5 84 aa13.12□□□□□ -0.31
ARHGEF1-223ENST00000617585 COLCA2A8K830 154 aa13.11□□□□□ -0.31
ARHGEF1-223ENST00000617585 SLC7A5P1Q8MH63 180 aa13.11□□□□□ -0.31
ARHGEF1-223ENST00000617585 A0A0U1RRA0 63 aa13.1□□□□□ -0.31
ARHGEF1-223ENST00000617585 NDUFA12Q9UI09 145 aa13.1□□□□□ -0.31
ARHGEF1-223ENST00000617585 MIR7-3HGQ8N6C7 128 aa13.09□□□□□ -0.31
ARHGEF1-223ENST00000617585 MYMXA0A1B0GTQ4 84 aa13.08□□□□□ -0.32
ARHGEF1-223ENST00000617585 PLNP26678 52 aa13.08□□□□□ -0.32
ARHGEF1-223ENST00000617585 MEIG1Q5JSS6 88 aa13.08□□□□□ -0.32
ARHGEF1-223ENST00000617585 PLEKHB2Q96CS7 222 aa13.08□□□□□ -0.32
ARHGEF1-223ENST00000617585 HSPB8Q9UJY1 196 aa13.08□□□□□ -0.32
ARHGEF1-223ENST00000617585 IGKV2D-26A0A0A0MRZ7 120 aa13.07□□□□□ -0.32
ARHGEF1-223ENST00000617585 ATP6V1G1O75348 118 aa13.07□□□□□ -0.32
ARHGEF1-223ENST00000617585 LOC107984156A0A0G2JMH3 177 aa13.06□□□□□ -0.32
ARHGEF1-223ENST00000617585 H0Y8G0 127 aa13.06□□□□□ -0.32
ARHGEF1-223ENST00000617585 LEPROTO15243 131 aa13.06□□□□□ -0.32
ARHGEF1-223ENST00000617585 PRR4Q16378 134 aa13.06□□□□□ -0.32
ARHGEF1-223ENST00000617585 ARL17AQ8IVW1 177 aa13.06□□□□□ -0.32
ARHGEF1-223ENST00000617585 BOD1L2Q8IYS8 172 aa13.06□□□□□ -0.32
ARHGEF1-223ENST00000617585 TSPAN13O95857 204 aa13.05□□□□□ -0.32
ARHGEF1-223ENST00000617585 SPRR1AP35321 89 aa13.05□□□□□ -0.32
ARHGEF1-223ENST00000617585 TSPEAR-AS2P59090 65 aa13.05□□□□□ -0.32
ARHGEF1-223ENST00000617585 CTAG1AP78358 180 aa13.05□□□□□ -0.32
ARHGEF1-223ENST00000617585 MAP1LC3CQ9BXW4 147 aa13.05□□□□□ -0.32
ARHGEF1-223ENST00000617585 PRYO14603 147 aa13.04□□□□□ -0.32
ARHGEF1-223ENST00000617585 KCNQ1DNQ9H478 68 aa13.04□□□□□ -0.32
ARHGEF1-223ENST00000617585 DPM2O94777 84 aa13.02□□□□□ -0.33
ARHGEF1-223ENST00000617585 LINC00337Q8N6G1 96 aa13.02□□□□□ -0.33
ARHGEF1-223ENST00000617585 FABP4P15090 132 aa13.01□□□□□ -0.33
ARHGEF1-223ENST00000617585 KRTAP4-16G5E9R7 235 aaPredicted RBP13□□□□□ -0.33
ARHGEF1-223ENST00000617585 J3QQQ9 107 aa13□□□□□ -0.33
ARHGEF1-223ENST00000617585 NMUP48645 174 aa13□□□□□ -0.33
ARHGEF1-223ENST00000617585 LINC00304Q8N9R0 145 aa13□□□□□ -0.33
ARHGEF1-223ENST00000617585 IGKCP01834 107 aa12.99□□□□□ -0.33
ARHGEF1-223ENST00000617585 HERVK_113P61574 105 aa12.99□□□□□ -0.33
ARHGEF1-223ENST00000617585 HIGD2AQ9BW72 106 aa12.99□□□□□ -0.33
ARHGEF1-223ENST00000617585 NCR3O14931 201 aa12.98□□□□□ -0.33
ARHGEF1-223ENST00000617585 SPRR4Q96PI1 79 aa12.98□□□□□ -0.33
ARHGEF1-223ENST00000617585 PMCHL2Q9BQD1 86 aa12.97□□□□□ -0.33
ARHGEF1-223ENST00000617585 TRBV10-2A0A0K0K1G8 114 aa12.96□□□□□ -0.33
ARHGEF1-223ENST00000617585 TRBV10-3A0A0K0K1G6 114 aa12.95□□□□□ -0.34
ARHGEF1-223ENST00000617585 ZNF706Q9Y5V0 76 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF1-223ENST00000617585 LGALS3P17931 250 aaKnown RBP12.93□□□□□ -0.34
ARHGEF1-223ENST00000617585 C3orf22Q8N5N4 141 aa12.93□□□□□ -0.34
ARHGEF1-223ENST00000617585 DAND5Q8N907 189 aa12.93□□□□□ -0.34
ARHGEF1-223ENST00000617585 ETDCA0A1B0GVM5 59 aa12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 E9PLD3 99 aa12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 HIST1H2BKO60814 126 aa12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 NDUFC2O95298 119 aa12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 HIST1H2BJP06899 126 aa12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 HIST1H2BOP23527 126 aa12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 HIST1H2BBP33778 126 aa12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 HIST1H2BDP58876 126 aa12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 HIST1H2BCP62807 126 aa12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 HIST2H2BEQ16778 126 aa12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 HIST1H2BHQ93079 126 aa12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 HIST1H2BNQ99877 126 aa12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 HIST1H2BMQ99879 126 aa12.91□□□□□ -0.34
ARHGEF1-223ENST00000617585 S100A12P80511 92 aa12.9□□□□□ -0.34
ARHGEF1-223ENST00000617585 SMCR5Q8TEV8 140 aa12.9□□□□□ -0.34
ARHGEF1-223ENST00000617585 SPANXB1Q9NS25 103 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF1-223ENST00000617585 MUC2Q02817 5179 aa12.89□□□□□ -0.35
ARHGEF1-223ENST00000617585 B5MCH6 92 aa12.88□□□□□ -0.35
ARHGEF1-223ENST00000617585 SYS1-DBNDD2H3BUS1 97 aa12.88□□□□□ -0.35
ARHGEF1-223ENST00000617585 DDTP30046 118 aa12.88□□□□□ -0.35
ARHGEF1-223ENST00000617585 SPAG11AQ6PDA7 123 aa12.88□□□□□ -0.35
ARHGEF1-223ENST00000617585 A0A0J9YXY3 114 aa12.87□□□□□ -0.35
ARHGEF1-223ENST00000617585 MIEN1Q9BRT3 115 aa12.87□□□□□ -0.35
ARHGEF1-223ENST00000617585 IGLV6-57P01721 117 aa12.86□□□□□ -0.35
ARHGEF1-223ENST00000617585 LINC00483Q53H64 154 aa12.86□□□□□ -0.35
ARHGEF1-223ENST00000617585 LINC01545Q5VT33 79 aa12.85□□□□□ -0.35
ARHGEF1-223ENST00000617585 RETNLBQ9BQ08 111 aa12.85□□□□□ -0.35
ARHGEF1-223ENST00000617585 ADAMTSL4-AS1Q5T5F5 129 aa12.84□□□□□ -0.35
ARHGEF1-223ENST00000617585 SOSTDC1Q6X4U4 206 aa12.84□□□□□ -0.35
ARHGEF1-223ENST00000617585 EIF4EBP3O60516 100 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF1-223ENST00000617585 PET117Q6UWS5 81 aa12.82□□□□□ -0.36
ARHGEF1-223ENST00000617585 Q6ZRX8 168 aa12.82□□□□□ -0.36
ARHGEF1-223ENST00000617585 TPRXLQ17RH7 258 aa12.81□□□□□ -0.36
ARHGEF1-223ENST00000617585 Q9BRP9 147 aa12.81□□□□□ -0.36
ARHGEF1-223ENST00000617585 ERC2-IT1O76042 136 aa12.8□□□□□ -0.36
ARHGEF1-223ENST00000617585 COA6Q5JTJ3 125 aaKnown RBP12.8□□□□□ -0.36
ARHGEF1-223ENST00000617585 LITAFQ99732 161 aa12.8□□□□□ -0.36
ARHGEF1-223ENST00000617585 S100A7L2Q5SY68 101 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms