RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 ZFYVE26Q68DK2 2539 aa6.12□□□□□ -1.43
PDLIM5-222ENST00000615540 C6orf48Q9UBA6 75 aa6.12□□□□□ -1.43
PDLIM5-222ENST00000615540 MUC4Q99102 2169 aa6.12□□□□□ -1.43
PDLIM5-222ENST00000615540 SNURFQ9Y675 71 aa6.11□□□□□ -1.43
PDLIM5-222ENST00000615540 C19orf73Q9NVV2 129 aa6.11□□□□□ -1.43
PDLIM5-222ENST00000615540 IGLV9-49A0A0B4J1Y8 123 aa6.11□□□□□ -1.43
PDLIM5-222ENST00000615540 NDUFC2-KCTD14E9PQ53 114 aa6.11□□□□□ -1.43
PDLIM5-222ENST00000615540 PDE6GP18545 87 aa6.11□□□□□ -1.43
PDLIM5-222ENST00000615540 DHRS4-AS1Q9P1J3 65 aa6.1□□□□□ -1.43
PDLIM5-222ENST00000615540 ZNF292O60281 2723 aa6.1□□□□□ -1.43
PDLIM5-222ENST00000615540 C20orf197Q8N268 126 aa6.1□□□□□ -1.43
PDLIM5-222ENST00000615540 REG3GQ6UW15 175 aa6.1□□□□□ -1.43
PDLIM5-222ENST00000615540 LINC00575Q6W349 94 aa6.1□□□□□ -1.43
PDLIM5-222ENST00000615540 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.09□□□□□ -1.43
PDLIM5-222ENST00000615540 PKD1L2Q7Z442 2459 aa6.09□□□□□ -1.44
PDLIM5-222ENST00000615540 NDUFC2O95298 119 aa6.09□□□□□ -1.44
PDLIM5-222ENST00000615540 FAM30AQ9NZY2 134 aa6.09□□□□□ -1.44
PDLIM5-222ENST00000615540 CACNA1AO00555 2505 aa6.08□□□□□ -1.44
PDLIM5-222ENST00000615540 LINC01561Q8N1V8 128 aa6.08□□□□□ -1.44
PDLIM5-222ENST00000615540 Q6JHZ5 121 aa6.07□□□□□ -1.44
PDLIM5-222ENST00000615540 UQCRQO14949 82 aa6.07□□□□□ -1.44
PDLIM5-222ENST00000615540 LINC00846Q9NV44 126 aa6.07□□□□□ -1.44
PDLIM5-222ENST00000615540 ZNF469Q96JG9 3925 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-222ENST00000615540 MRPL55Q7Z7F7 128 aaKnown RBP6.06□□□□□ -1.44
PDLIM5-222ENST00000615540 TLN2Q9Y4G6 2542 aa6.06□□□□□ -1.44
PDLIM5-222ENST00000615540 DEFB116Q30KQ4 102 aa6.06□□□□□ -1.44
PDLIM5-222ENST00000615540 ATP5EP2Q5VTU8 51 aa6.06□□□□□ -1.44
PDLIM5-222ENST00000615540 ABCA12Q86UK0 2595 aa6.06□□□□□ -1.44
PDLIM5-222ENST00000615540 NDUFB1O75438 58 aa6.06□□□□□ -1.44
PDLIM5-222ENST00000615540 CENPEQ02224 2701 aa6.06□□□□□ -1.44
PDLIM5-222ENST00000615540 FAM240AA0A1B0GVK7 77 aa6.06□□□□□ -1.44
PDLIM5-222ENST00000615540 WFDC13Q8IUB5 93 aa6.06□□□□□ -1.44
PDLIM5-222ENST00000615540 PRLHP81277 87 aa6.05□□□□□ -1.44
PDLIM5-222ENST00000615540 C2orf48Q96LS8 159 aa6.05□□□□□ -1.44
PDLIM5-222ENST00000615540 MYO18BQ8IUG5 2567 aa6.05□□□□□ -1.44
PDLIM5-222ENST00000615540 NUPR2A6NF83 97 aa6.05□□□□□ -1.44
PDLIM5-222ENST00000615540 CR1P17927 2039 aa6.05□□□□□ -1.44
PDLIM5-222ENST00000615540 J3KT08 172 aa6.05□□□□□ -1.44
PDLIM5-222ENST00000615540 SETD2Q9BYW2 2564 aaPredicted RBP6.04□□□□□ -1.44
PDLIM5-222ENST00000615540 LINC00588Q9Y4M8 146 aa6.04□□□□□ -1.44
PDLIM5-222ENST00000615540 LINC01556Q5JQF7 62 aa6.04□□□□□ -1.44
PDLIM5-222ENST00000615540 C22orf24Q9Y442 160 aa6.04□□□□□ -1.44
PDLIM5-222ENST00000615540 FAM168BA1KXE4 195 aa6.04□□□□□ -1.44
PDLIM5-222ENST00000615540 MUC7Q8TAX7 377 aa6.04□□□□□ -1.44
PDLIM5-222ENST00000615540 FAM19A3Q7Z5A8 133 aa6.04□□□□□ -1.44
PDLIM5-222ENST00000615540 ACANP16112 2415 aa6.04□□□□□ -1.44
PDLIM5-222ENST00000615540 MP68P56378 58 aa6.03□□□□□ -1.44
PDLIM5-222ENST00000615540 C7orf33Q8WU49 177 aa6.03□□□□□ -1.44
PDLIM5-222ENST00000615540 IMUPQ9GZP8 106 aa6.03□□□□□ -1.44
PDLIM5-222ENST00000615540 PIEZO1Q92508 2521 aa6.03□□□□□ -1.44
PDLIM5-222ENST00000615540 C1orf137Q5JT78 98 aa6.03□□□□□ -1.44
PDLIM5-222ENST00000615540 Q8N9L7 120 aa6.02□□□□□ -1.45
PDLIM5-222ENST00000615540 SERP2Q8N6R1 65 aa6.02□□□□□ -1.45
PDLIM5-222ENST00000615540 MDFIQ99750 246 aa6.02□□□□□ -1.45
PDLIM5-222ENST00000615540 Q6Q795 121 aa6.02□□□□□ -1.45
PDLIM5-222ENST00000615540 FAM104AQ969W3 186 aa6.02□□□□□ -1.45
PDLIM5-222ENST00000615540 SPINK6Q6UWN8 80 aa6.02□□□□□ -1.45
PDLIM5-222ENST00000615540 COX7CP15954 63 aa6.02□□□□□ -1.45
PDLIM5-222ENST00000615540 SMCR5Q8TEV8 140 aa6.01□□□□□ -1.45
PDLIM5-222ENST00000615540 IGLV5-52A0A0A0MRZ9 124 aa6.01□□□□□ -1.45
PDLIM5-222ENST00000615540 KIAA0087Q14695 138 aa6.01□□□□□ -1.45
PDLIM5-222ENST00000615540 Q6ZRP5 223 aa6.01□□□□□ -1.45
PDLIM5-222ENST00000615540 HRNRQ86YZ3 2850 aaPredicted RBP6.01□□□□□ -1.45
PDLIM5-222ENST00000615540 FAM236DA0A1B0GTK5 79 aa6□□□□□ -1.45
PDLIM5-222ENST00000615540 FAM236CP0DP71 79 aa6□□□□□ -1.45
PDLIM5-222ENST00000615540 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
PDLIM5-222ENST00000615540 Q9BRP9 147 aa6□□□□□ -1.45
PDLIM5-222ENST00000615540 PRYO14603 147 aa6□□□□□ -1.45
PDLIM5-222ENST00000615540 DOPEY1Q5JWR5 2465 aa6□□□□□ -1.45
PDLIM5-222ENST00000615540 LINC00167Q96N53 147 aa6□□□□□ -1.45
PDLIM5-222ENST00000615540 IGKV4-1P06312 121 aa6□□□□□ -1.45
PDLIM5-222ENST00000615540 Q6ZVQ6 151 aa6□□□□□ -1.45
PDLIM5-222ENST00000615540 PRR4Q16378 134 aa5.99□□□□□ -1.45
PDLIM5-222ENST00000615540 ST20-AS1Q8NBB2 130 aa5.99□□□□□ -1.45
PDLIM5-222ENST00000615540 LINC01547P58512 204 aaPredicted RBP5.98□□□□□ -1.45
PDLIM5-222ENST00000615540 ELOF1P60002 83 aaKnown RBP5.98□□□□□ -1.45
PDLIM5-222ENST00000615540 SERTAD4-AS1Q5TG53 156 aa5.98□□□□□ -1.45
PDLIM5-222ENST00000615540 H3BNG1 76 aa5.98□□□□□ -1.45
PDLIM5-222ENST00000615540 PHF5AQ7RTV0 110 aaKnown RBP5.98□□□□□ -1.45
PDLIM5-222ENST00000615540 LINC00474Q9P2X8 69 aa5.98□□□□□ -1.45
PDLIM5-222ENST00000615540 CELSR2Q9HCU4 2923 aa5.98□□□□□ -1.45
PDLIM5-222ENST00000615540 TMEM258P61165 79 aa5.98□□□□□ -1.45
PDLIM5-222ENST00000615540 C5orf47Q569G3 176 aa5.97□□□□□ -1.45
PDLIM5-222ENST00000615540 FASNP49327 2511 aaKnown RBP5.97□□□□□ -1.45
PDLIM5-222ENST00000615540 LINC00612Q8N6U2 182 aa5.97□□□□□ -1.45
PDLIM5-222ENST00000615540 K7EIL1 84 aa5.97□□□□□ -1.45
PDLIM5-222ENST00000615540 C4orf48Q5BLP8 95 aa5.97□□□□□ -1.45
PDLIM5-222ENST00000615540 F8WDY8 70 aa5.96□□□□□ -1.45
PDLIM5-222ENST00000615540 CHTF8P0CG12 524 aa5.96□□□□□ -1.46
PDLIM5-222ENST00000615540 HECTD1Q9ULT8 2610 aa5.96□□□□□ -1.46
PDLIM5-222ENST00000615540 C15orf56Q8N910 161 aa5.96□□□□□ -1.46
PDLIM5-222ENST00000615540 TRBV7-7A0A0K0K1E9 115 aa5.95□□□□□ -1.46
PDLIM5-222ENST00000615540 CIRBP-AS1Q8TBR5 109 aa5.95□□□□□ -1.46
PDLIM5-222ENST00000615540 C9orf129Q5T035 196 aaKnown RBP5.95□□□□□ -1.46
PDLIM5-222ENST00000615540 GVQW2A0A096LPI5 108 aaPredicted RBP5.95□□□□□ -1.46
PDLIM5-222ENST00000615540 RETNLBQ9BQ08 111 aa5.95□□□□□ -1.46
PDLIM5-222ENST00000615540 A0A087WSZ3 146 aa5.94□□□□□ -1.46
PDLIM5-222ENST00000615540 CASC10Q5T4H9 136 aa5.94□□□□□ -1.46
PDLIM5-222ENST00000615540 C1orf134Q5TEV5 83 aa5.94□□□□□ -1.46
PDLIM5-222ENST00000615540 Q6ZQT0 140 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms