RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 ERG28Q9UKR5 140 aa8.24□□□□□ -1.09
SRGAP2C-204ENST00000613462 LINC00158P58513 81 aa8.23□□□□□ -1.09
SRGAP2C-204ENST00000613462 GAGE2EQ4V326 116 aa8.23□□□□□ -1.09
SRGAP2C-204ENST00000613462 GAGE2DQ9UEU5 116 aa8.23□□□□□ -1.09
SRGAP2C-204ENST00000613462 TP73-AS1Q9UF72 201 aa8.23□□□□□ -1.09
SRGAP2C-204ENST00000613462 TIMM17BO60830 172 aa8.22□□□□□ -1.09
SRGAP2C-204ENST00000613462 PFN2P35080 140 aa8.22□□□□□ -1.09
SRGAP2C-204ENST00000613462 HAMPP81172 84 aa8.22□□□□□ -1.09
SRGAP2C-204ENST00000613462 DMBT1Q9UGM3 2413 aaPredicted RBP8.22□□□□□ -1.09
SRGAP2C-204ENST00000613462 VPS13BQ7Z7G8 4022 aa8.22□□□□□ -1.09
SRGAP2C-204ENST00000613462 A0A0U1RRA0 63 aa8.21□□□□□ -1.1
SRGAP2C-204ENST00000613462 SMIM13P0DJ93 91 aa8.21□□□□□ -1.1
SRGAP2C-204ENST00000613462 SRSF9Q13242 221 aaKnown RBP eCLIP8.21□□□□□ -1.1
SRGAP2C-204ENST00000613462 HIGD1BQ9P298 99 aa8.21□□□□□ -1.1
SRGAP2C-204ENST00000613462 MYCBP2O75592 4640 aa8.21□□□□□ -1.1
SRGAP2C-204ENST00000613462 EPM2AB3EWF7 344 aa8.2□□□□□ -1.1
SRGAP2C-204ENST00000613462 Q8N1X5 172 aa8.2□□□□□ -1.1
SRGAP2C-204ENST00000613462 HIST1H4GQ99525 98 aa8.2□□□□□ -1.1
SRGAP2C-204ENST00000613462 C9orf129Q5T035 196 aaKnown RBP8.19□□□□□ -1.1
SRGAP2C-204ENST00000613462 C2orf91Q6ZV80 131 aa8.19□□□□□ -1.1
SRGAP2C-204ENST00000613462 C7orf33Q8WU49 177 aa8.19□□□□□ -1.1
SRGAP2C-204ENST00000613462 COPS9Q8WXC6 57 aa8.19□□□□□ -1.1
SRGAP2C-204ENST00000613462 PCP4L1A6NKN8 68 aa8.18□□□□□ -1.1
SRGAP2C-204ENST00000613462 FAM229AH3BQW9 127 aa8.18□□□□□ -1.1
SRGAP2C-204ENST00000613462 LINC00528Q8N1L1 170 aa8.18□□□□□ -1.1
SRGAP2C-204ENST00000613462 XAGE1AQ9HD64 81 aa8.18□□□□□ -1.1
SRGAP2C-204ENST00000613462 SPANXB1Q9NS25 103 aaPredicted RBP8.18□□□□□ -1.1
SRGAP2C-204ENST00000613462 FAT1Q14517 4588 aa8.18□□□□□ -1.1
SRGAP2C-204ENST00000613462 A0A1W2PNN7 141 aa8.17□□□□□ -1.1
SRGAP2C-204ENST00000613462 SMR3BP02814 79 aaPredicted RBP8.17□□□□□ -1.1
SRGAP2C-204ENST00000613462 DDTP30046 118 aa8.17□□□□□ -1.1
SRGAP2C-204ENST00000613462 HSD52Q0P140 79 aa8.17□□□□□ -1.1
SRGAP2C-204ENST00000613462 Q6ZVH6 145 aa8.17□□□□□ -1.1
SRGAP2C-204ENST00000613462 MIR7-3HGQ8N6C7 128 aa8.17□□□□□ -1.1
SRGAP2C-204ENST00000613462 SPANXDQ9BXN6 97 aa8.17□□□□□ -1.1
SRGAP2C-204ENST00000613462 SPANXCQ9NY87 97 aa8.17□□□□□ -1.1
SRGAP2C-204ENST00000613462 PLA2G2DQ9UNK4 145 aa8.17□□□□□ -1.1
SRGAP2C-204ENST00000613462 PLA2G1BP04054 148 aaKnown RBP8.16□□□□□ -1.1
SRGAP2C-204ENST00000613462 DAND5Q8N907 189 aa8.16□□□□□ -1.1
SRGAP2C-204ENST00000613462 SND1-IT1Q9HBX3 110 aa8.16□□□□□ -1.1
SRGAP2C-204ENST00000613462 DNAH8Q96JB1 4490 aa8.15□□□□□ -1.1
SRGAP2C-204ENST00000613462 FAM168BA1KXE4 195 aa8.15□□□□□ -1.1
SRGAP2C-204ENST00000613462 IFITM1P13164 125 aa8.15□□□□□ -1.1
SRGAP2C-204ENST00000613462 NPC2P61916 151 aa8.15□□□□□ -1.1
SRGAP2C-204ENST00000613462 CTAG1AP78358 180 aa8.15□□□□□ -1.1
SRGAP2C-204ENST00000613462 TAL2Q16559 108 aa8.15□□□□□ -1.1
SRGAP2C-204ENST00000613462 Q5VSD8 79 aa8.15□□□□□ -1.1
SRGAP2C-204ENST00000613462 FAM19A5Q7Z5A7 132 aaPredicted RBP8.15□□□□□ -1.1
SRGAP2C-204ENST00000613462 M0QXV9 152 aa8.14□□□□□ -1.11
SRGAP2C-204ENST00000613462 ADAMTSL4-AS1Q5T5F5 129 aa8.14□□□□□ -1.11
SRGAP2C-204ENST00000613462 LITAFQ99732 161 aa8.14□□□□□ -1.11
SRGAP2C-204ENST00000613462 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
SRGAP2C-204ENST00000613462 A6NJY4 79 aa8.13□□□□□ -1.11
SRGAP2C-204ENST00000613462 M0R143 59 aa8.13□□□□□ -1.11
SRGAP2C-204ENST00000613462 RPL24P83731 157 aaKnown RBP8.13□□□□□ -1.11
SRGAP2C-204ENST00000613462 SRRM2Q9UQ35 2752 aaKnown RBP8.12□□□□□ -1.11
SRGAP2C-204ENST00000613462 IGLV5-37A0A075B6J1 123 aa8.12□□□□□ -1.11
SRGAP2C-204ENST00000613462 RPL37AP61513 92 aaKnown RBP8.12□□□□□ -1.11
SRGAP2C-204ENST00000613462 LBHQ53QV2 105 aaPredicted RBP8.12□□□□□ -1.11
SRGAP2C-204ENST00000613462 MUSTN1Q8IVN3 82 aa8.12□□□□□ -1.11
SRGAP2C-204ENST00000613462 LINC00308Q8TCZ7 52 aa8.12□□□□□ -1.11
SRGAP2C-204ENST00000613462 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
SRGAP2C-204ENST00000613462 KRTAP7-1Q8IUC3 87 aa8.11□□□□□ -1.11
SRGAP2C-204ENST00000613462 CEND1Q8N111 149 aa8.11□□□□□ -1.11
SRGAP2C-204ENST00000613462 NKAPP1Q8N9T2 125 aa8.11□□□□□ -1.11
SRGAP2C-204ENST00000613462 LOC107984156A0A0G2JMH3 177 aa8.1□□□□□ -1.11
SRGAP2C-204ENST00000613462 HINT1P49773 126 aaPredicted RBP8.1□□□□□ -1.11
SRGAP2C-204ENST00000613462 PHF5AQ7RTV0 110 aaKnown RBP8.1□□□□□ -1.11
SRGAP2C-204ENST00000613462 MRPL55Q7Z7F7 128 aaKnown RBP8.1□□□□□ -1.11
SRGAP2C-204ENST00000613462 ARL17AQ8IVW1 177 aa8.1□□□□□ -1.11
SRGAP2C-204ENST00000613462 C22orf24Q9Y442 160 aa8.1□□□□□ -1.11
SRGAP2C-204ENST00000613462 BATFQ16520 125 aa8.09□□□□□ -1.11
SRGAP2C-204ENST00000613462 VPREB1P12018 145 aa8.08□□□□□ -1.12
SRGAP2C-204ENST00000613462 UBE2BP63146 152 aa8.08□□□□□ -1.12
SRGAP2C-204ENST00000613462 PRR3P79522 188 aaKnown RBP8.08□□□□□ -1.12
SRGAP2C-204ENST00000613462 PPDPFQ9H3Y8 114 aa8.08□□□□□ -1.12
SRGAP2C-204ENST00000613462 UBR4Q5T4S7 5183 aa8.07□□□□□ -1.12
SRGAP2C-204ENST00000613462 SOSTDC1Q6X4U4 206 aa8.07□□□□□ -1.12
SRGAP2C-204ENST00000613462 A4D1N5 150 aa8.06□□□□□ -1.12
SRGAP2C-204ENST00000613462 FXYD2P54710 66 aa8.06□□□□□ -1.12
SRGAP2C-204ENST00000613462 BVES-AS1Q5T3Y7 98 aa8.06□□□□□ -1.12
SRGAP2C-204ENST00000613462 A6NDN8 102 aa8.05□□□□□ -1.12
SRGAP2C-204ENST00000613462 KRTAP10-4P60372 401 aaPredicted RBP8.05□□□□□ -1.12
SRGAP2C-204ENST00000613462 RAB37Q96AX2 223 aa8.05□□□□□ -1.12
SRGAP2C-204ENST00000613462 NHP2Q9NX24 153 aaKnown RBP8.05□□□□□ -1.12
SRGAP2C-204ENST00000613462 M0R378 163 aa8.04□□□□□ -1.12
SRGAP2C-204ENST00000613462 NCR3O14931 201 aa8.04□□□□□ -1.12
SRGAP2C-204ENST00000613462 NDUFC2O95298 119 aa8.04□□□□□ -1.12
SRGAP2C-204ENST00000613462 LINC00167Q96N53 147 aa8.04□□□□□ -1.12
SRGAP2C-204ENST00000613462 PSORS1C2Q9UIG4 136 aa8.04□□□□□ -1.12
SRGAP2C-204ENST00000613462 FLG2Q5D862 2391 aaPredicted RBP8.04□□□□□ -1.12
SRGAP2C-204ENST00000613462 TRBV10-2A0A0K0K1G8 114 aa8.03□□□□□ -1.12
SRGAP2C-204ENST00000613462 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
SRGAP2C-204ENST00000613462 Q8NDZ9 215 aa8.03□□□□□ -1.12
SRGAP2C-204ENST00000613462 TRAV13-2A0A0B4J235 113 aa8.02□□□□□ -1.13
SRGAP2C-204ENST00000613462 GAGE10A6NGK3 116 aa8.02□□□□□ -1.13
SRGAP2C-204ENST00000613462 C1orf137Q5JT78 98 aa8.02□□□□□ -1.13
SRGAP2C-204ENST00000613462 OR13C6PQ8NH95 151 aa8.02□□□□□ -1.13
SRGAP2C-204ENST00000613462 IGLV1-50A0A075B6I6 118 aa8.01□□□□□ -1.13
SRGAP2C-204ENST00000613462 A0A0B4J2C4 111 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms