RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 Q8NAQ8 132 aa11.36□□□□□ -0.59
CNOT3-208ENST00000613073 OBSCN-AS1Q96MR7 158 aa11.36□□□□□ -0.59
CNOT3-208ENST00000613073 SS18Q15532 418 aa11.35□□□□□ -0.59
CNOT3-208ENST00000613073 COX7B2Q8TF08 81 aa11.35□□□□□ -0.59
CNOT3-208ENST00000613073 H0YGX0 51 aa11.35□□□□□ -0.59
CNOT3-208ENST00000613073 HTN3P15516 51 aa11.35□□□□□ -0.59
CNOT3-208ENST00000613073 MRAPQ8TCY5 172 aa11.35□□□□□ -0.59
CNOT3-208ENST00000613073 CMYA5Q8N3K9 4069 aa11.34□□□□□ -0.59
CNOT3-208ENST00000613073 CLPSL2Q6UWE3 100 aa11.34□□□□□ -0.59
CNOT3-208ENST00000613073 ORMDL1Q9P0S3 153 aa11.34□□□□□ -0.59
CNOT3-208ENST00000613073 FAM236DA0A1B0GTK5 79 aa11.33□□□□□ -0.59
CNOT3-208ENST00000613073 FAM236CP0DP71 79 aa11.33□□□□□ -0.59
CNOT3-208ENST00000613073 LINC00336Q6ZUF6 198 aa11.33□□□□□ -0.6
CNOT3-208ENST00000613073 CCKP06307 115 aa11.33□□□□□ -0.6
CNOT3-208ENST00000613073 MIFP14174 115 aa11.32□□□□□ -0.6
CNOT3-208ENST00000613073 KRTAP10-11P60412 298 aa11.32□□□□□ -0.6
CNOT3-208ENST00000613073 XCL1P47992 114 aa11.32□□□□□ -0.6
CNOT3-208ENST00000613073 COL6A5A8TX70 2615 aa11.31□□□□□ -0.6
CNOT3-208ENST00000613073 F8WDY8 70 aa11.31□□□□□ -0.6
CNOT3-208ENST00000613073 NDUFC2O95298 119 aa11.3□□□□□ -0.6
CNOT3-208ENST00000613073 NOTCH1P46531 2555 aa11.3□□□□□ -0.6
CNOT3-208ENST00000613073 Q8N3U1 123 aa11.3□□□□□ -0.6
CNOT3-208ENST00000613073 SNURFQ9Y675 71 aa11.3□□□□□ -0.6
CNOT3-208ENST00000613073 BAHCC1Q9P281 2608 aa11.3□□□□□ -0.6
CNOT3-208ENST00000613073 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
CNOT3-208ENST00000613073 PRR3P79522 188 aaKnown RBP11.29□□□□□ -0.6
CNOT3-208ENST00000613073 C1orf43Q9BWL3 253 aa11.29□□□□□ -0.6
CNOT3-208ENST00000613073 RETNQ9HD89 108 aa11.29□□□□□ -0.6
CNOT3-208ENST00000613073 LINC00959A0A1B0GUT2 108 aa11.29□□□□□ -0.6
CNOT3-208ENST00000613073 IGHV3OR16-9A0A0B4J2B5 98 aa11.28□□□□□ -0.6
CNOT3-208ENST00000613073 PKIGQ9Y2B9 76 aa11.28□□□□□ -0.6
CNOT3-208ENST00000613073 CYSRT1A8MQ03 144 aa11.26□□□□□ -0.61
CNOT3-208ENST00000613073 S100A7L2Q5SY68 101 aa11.25□□□□□ -0.61
CNOT3-208ENST00000613073 TENM3Q9P273 2699 aa11.25□□□□□ -0.61
CNOT3-208ENST00000613073 A0A1B0GUV1 79 aa11.25□□□□□ -0.61
CNOT3-208ENST00000613073 H7BZZ5 65 aa11.25□□□□□ -0.61
CNOT3-208ENST00000613073 LINC00269Q8N2A0 174 aa11.25□□□□□ -0.61
CNOT3-208ENST00000613073 RMI2Q96E14 147 aa11.24□□□□□ -0.61
CNOT3-208ENST00000613073 UBL5Q9BZL1 73 aa11.24□□□□□ -0.61
CNOT3-208ENST00000613073 A0A087WZ39 114 aa11.24□□□□□ -0.61
CNOT3-208ENST00000613073 IGLV10-54A0A075B6I4 117 aa11.23□□□□□ -0.61
CNOT3-208ENST00000613073 NDUFC2-KCTD14E9PQ53 114 aa11.23□□□□□ -0.61
CNOT3-208ENST00000613073 ANGP03950 147 aaKnown RBP11.22□□□□□ -0.61
CNOT3-208ENST00000613073 HAMPP81172 84 aa11.22□□□□□ -0.61
CNOT3-208ENST00000613073 PRO0628Q9UI54 55 aa11.22□□□□□ -0.61
CNOT3-208ENST00000613073 SERP1Q9Y6X1 66 aa11.21□□□□□ -0.61
CNOT3-208ENST00000613073 TRAV10A0A0B4J240 114 aa11.21□□□□□ -0.62
CNOT3-208ENST00000613073 IBA57-AS1B1ANH7 110 aa11.21□□□□□ -0.62
CNOT3-208ENST00000613073 JMJD7-PLA2G4BH0Y9G9 81 aa11.21□□□□□ -0.62
CNOT3-208ENST00000613073 M0R2N4 97 aa11.21□□□□□ -0.62
CNOT3-208ENST00000613073 C6orf226Q5I0X4 101 aa11.21□□□□□ -0.62
CNOT3-208ENST00000613073 LYPD5Q6UWN5 251 aa11.2□□□□□ -0.62
CNOT3-208ENST00000613073 Q8N814 137 aa11.2□□□□□ -0.62
CNOT3-208ENST00000613073 ATP5EP2Q5VTU8 51 aa11.2□□□□□ -0.62
CNOT3-208ENST00000613073 NBEAL1Q6ZS30 2694 aa11.19□□□□□ -0.62
CNOT3-208ENST00000613073 LINC00474Q9P2X8 69 aa11.19□□□□□ -0.62
CNOT3-208ENST00000613073 F8WEM9 126 aa11.19□□□□□ -0.62
CNOT3-208ENST00000613073 REG3AQ06141 175 aa11.18□□□□□ -0.62
CNOT3-208ENST00000613073 EGFEM1PQ0D2K5 195 aa11.18□□□□□ -0.62
CNOT3-208ENST00000613073 FP248Q71RG6 208 aaPredicted RBP11.18□□□□□ -0.62
CNOT3-208ENST00000613073 TMEM256-PLSCR3K7ERE1 68 aa11.17□□□□□ -0.62
CNOT3-208ENST00000613073 NANOS2P60321 138 aaKnown RBP11.16□□□□□ -0.62
CNOT3-208ENST00000613073 CHCHD10Q8WYQ3 142 aaPredicted RBP11.16□□□□□ -0.62
CNOT3-208ENST00000613073 SEC61GP60059 68 aa11.16□□□□□ -0.62
CNOT3-208ENST00000613073 SCXQ7RTU7 201 aa11.16□□□□□ -0.62
CNOT3-208ENST00000613073 TRAV7A0A075B6U4 112 aa11.16□□□□□ -0.62
CNOT3-208ENST00000613073 RBM3P98179 157 aaKnown RBP11.16□□□□□ -0.62
CNOT3-208ENST00000613073 DNAH3Q8TD57 4116 aa11.15□□□□□ -0.62
CNOT3-208ENST00000613073 A0A0U1RQV1 116 aa11.15□□□□□ -0.62
CNOT3-208ENST00000613073 PRB2P02812 416 aaPredicted RBP11.15□□□□□ -0.62
CNOT3-208ENST00000613073 Q6ZTC4 211 aa11.15□□□□□ -0.62
CNOT3-208ENST00000613073 LELP1Q5T871 98 aa11.15□□□□□ -0.63
CNOT3-208ENST00000613073 LAMTOR3Q9UHA4 124 aa11.14□□□□□ -0.63
CNOT3-208ENST00000613073 C6orf99Q4VX62 202 aa11.14□□□□□ -0.63
CNOT3-208ENST00000613073 LINC01547P58512 204 aaPredicted RBP11.13□□□□□ -0.63
CNOT3-208ENST00000613073 CD164L2Q6UWJ8 174 aa11.13□□□□□ -0.63
CNOT3-208ENST00000613073 KLK12Q9UKR0 248 aa11.13□□□□□ -0.63
CNOT3-208ENST00000613073 BRK1Q8WUW1 75 aa11.13□□□□□ -0.63
CNOT3-208ENST00000613073 EPM2AB3EWF7 344 aa11.12□□□□□ -0.63
CNOT3-208ENST00000613073 A0A0J9YWU9 116 aa11.11□□□□□ -0.63
CNOT3-208ENST00000613073 LINC00167Q96N53 147 aa11.11□□□□□ -0.63
CNOT3-208ENST00000613073 KPRPQ5T749 579 aaPredicted RBP11.11□□□□□ -0.63
CNOT3-208ENST00000613073 TRBV10-3A0A0K0K1G6 114 aa11.11□□□□□ -0.63
CNOT3-208ENST00000613073 Q8IZM0 81 aa11.11□□□□□ -0.63
CNOT3-208ENST00000613073 SMIM26A0A096LP01 95 aa11.1□□□□□ -0.63
CNOT3-208ENST00000613073 C9orf116Q5BN46 136 aaPredicted RBP11.1□□□□□ -0.63
CNOT3-208ENST00000613073 TM2D3Q9BRN9 247 aa11.1□□□□□ -0.63
CNOT3-208ENST00000613073 KLKP1Q107X0 134 aa11.1□□□□□ -0.63
CNOT3-208ENST00000613073 Q6ZQT0 140 aa11.1□□□□□ -0.63
CNOT3-208ENST00000613073 Q6ZVQ6 151 aa11.1□□□□□ -0.63
CNOT3-208ENST00000613073 TRBV7-6A0A0J9YX20 115 aa11.09□□□□□ -0.63
CNOT3-208ENST00000613073 MGAM2Q2M2H8 2515 aa11.09□□□□□ -0.63
CNOT3-208ENST00000613073 MPLKIPQ8TAP9 179 aa11.08□□□□□ -0.64
CNOT3-208ENST00000613073 KIAA0087Q14695 138 aa11.07□□□□□ -0.64
CNOT3-208ENST00000613073 WFDC10BQ8IUB3 73 aa11.07□□□□□ -0.64
CNOT3-208ENST00000613073 Q8NDZ9 215 aa11.06□□□□□ -0.64
CNOT3-208ENST00000613073 C6orf223Q8N319 242 aa11.05□□□□□ -0.64
CNOT3-208ENST00000613073 C11orf45Q8TAV5 145 aa11.05□□□□□ -0.64
CNOT3-208ENST00000613073 PRR34Q9NV39 138 aa11.04□□□□□ -0.64
CNOT3-208ENST00000613073 V9GYY9 64 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms