RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 CST9LQ9H4G1 147 aa9.54□□□□□ -0.88
CSNK1E-215ENST00000612795 COX17Q14061 63 aa9.53□□□□□ -0.88
CSNK1E-215ENST00000612795 Q8N377 158 aa9.53□□□□□ -0.88
CSNK1E-215ENST00000612795 PMVKQ15126 192 aa9.52□□□□□ -0.89
CSNK1E-215ENST00000612795 KRTAP19-2Q3LHN2 52 aa9.52□□□□□ -0.89
CSNK1E-215ENST00000612795 SLC25A20O43772 301 aa9.51□□□□□ -0.89
CSNK1E-215ENST00000612795 RPS29P62273 56 aaKnown RBP9.51□□□□□ -0.89
CSNK1E-215ENST00000612795 ZNF625Q96I27 306 aaPredicted RBP9.51□□□□□ -0.89
CSNK1E-215ENST00000612795 LINC01549A6NIU2 74 aa9.5□□□□□ -0.89
CSNK1E-215ENST00000612795 MOBPQ13875 183 aa9.5□□□□□ -0.89
CSNK1E-215ENST00000612795 IGLV9-49A0A0B4J1Y8 123 aa9.49□□□□□ -0.89
CSNK1E-215ENST00000612795 IGLV5-39A0A0G2JS06 123 aa9.49□□□□□ -0.89
CSNK1E-215ENST00000612795 SMCR5Q8TEV8 140 aa9.49□□□□□ -0.89
CSNK1E-215ENST00000612795 PRYO14603 147 aa9.48□□□□□ -0.89
CSNK1E-215ENST00000612795 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
CSNK1E-215ENST00000612795 KRTAP10-6P60371 365 aaPredicted RBP9.47□□□□□ -0.89
CSNK1E-215ENST00000612795 KIAA1644Q3SXP7 199 aa9.47□□□□□ -0.89
CSNK1E-215ENST00000612795 LINC00483Q53H64 154 aa9.47□□□□□ -0.89
CSNK1E-215ENST00000612795 GAGE2AQ6NT46 116 aa9.47□□□□□ -0.89
CSNK1E-215ENST00000612795 ANAPC16Q96DE5 110 aa9.47□□□□□ -0.89
CSNK1E-215ENST00000612795 ETDCA0A1B0GVM5 59 aa9.46□□□□□ -0.9
CSNK1E-215ENST00000612795 hCG_2014768A0A024R1R8 64 aa9.45□□□□□ -0.9
CSNK1E-215ENST00000612795 IGLV8-61A0A075B6I0 122 aa9.45□□□□□ -0.9
CSNK1E-215ENST00000612795 MT-ND4LP03901 98 aa9.45□□□□□ -0.9
CSNK1E-215ENST00000612795 IGLC3P0DOY3 106 aa9.45□□□□□ -0.9
CSNK1E-215ENST00000612795 SFTA2Q6UW10 78 aa9.45□□□□□ -0.9
CSNK1E-215ENST00000612795 ZNF22P17026 224 aaPredicted RBP9.44□□□□□ -0.9
CSNK1E-215ENST00000612795 LINC00158P58513 81 aa9.44□□□□□ -0.9
CSNK1E-215ENST00000612795 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
CSNK1E-215ENST00000612795 SSBP3-AS1Q7Z2R9 100 aa9.44□□□□□ -0.9
CSNK1E-215ENST00000612795 M0R2T5 61 aa9.43□□□□□ -0.9
CSNK1E-215ENST00000612795 NDUFA6P56556 154 aa9.43□□□□□ -0.9
CSNK1E-215ENST00000612795 SPRR1AP35321 89 aa9.42□□□□□ -0.9
CSNK1E-215ENST00000612795 A0A0U1RRA0 63 aa9.41□□□□□ -0.9
CSNK1E-215ENST00000612795 NCR3O14931 201 aa9.41□□□□□ -0.9
CSNK1E-215ENST00000612795 KCNQ1DNQ9H478 68 aa9.4□□□□□ -0.9
CSNK1E-215ENST00000612795 SMCO4Q9NRQ5 59 aa9.4□□□□□ -0.9
CSNK1E-215ENST00000612795 LINC01546A6NGU7 62 aa9.39□□□□□ -0.91
CSNK1E-215ENST00000612795 BOD1L2Q8IYS8 172 aa9.39□□□□□ -0.91
CSNK1E-215ENST00000612795 KRTAP9-7A8MTY7 169 aa9.38□□□□□ -0.91
CSNK1E-215ENST00000612795 KRTAP4-16G5E9R7 235 aaPredicted RBP9.38□□□□□ -0.91
CSNK1E-215ENST00000612795 S100A12P80511 92 aa9.38□□□□□ -0.91
CSNK1E-215ENST00000612795 C9orf153Q5TBE3 101 aa9.38□□□□□ -0.91
CSNK1E-215ENST00000612795 FA2HQ7L5A8 372 aa9.38□□□□□ -0.91
CSNK1E-215ENST00000612795 ATP6V1G1O75348 118 aa9.37□□□□□ -0.91
CSNK1E-215ENST00000612795 TMEM170BQ5T4T1 132 aa9.37□□□□□ -0.91
CSNK1E-215ENST00000612795 TRBV10-3A0A0K0K1G6 114 aa9.35□□□□□ -0.91
CSNK1E-215ENST00000612795 C9orf92A6NGG3 77 aa9.34□□□□□ -0.91
CSNK1E-215ENST00000612795 ERC2-IT1O76042 136 aa9.34□□□□□ -0.91
CSNK1E-215ENST00000612795 C11orf86A6NJI1 115 aa9.33□□□□□ -0.92
CSNK1E-215ENST00000612795 B5MCH6 92 aa9.33□□□□□ -0.92
CSNK1E-215ENST00000612795 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.32□□□□□ -0.92
CSNK1E-215ENST00000612795 SMIM13P0DJ93 91 aa9.32□□□□□ -0.92
CSNK1E-215ENST00000612795 MEIG1Q5JSS6 88 aa9.32□□□□□ -0.92
CSNK1E-215ENST00000612795 COX6B2Q6YFQ2 88 aa9.32□□□□□ -0.92
CSNK1E-215ENST00000612795 TRAV9-1A0A075B6T8 112 aa9.31□□□□□ -0.92
CSNK1E-215ENST00000612795 MIR7-3HGQ8N6C7 128 aa9.3□□□□□ -0.92
CSNK1E-215ENST00000612795 Q9BRP9 147 aa9.3□□□□□ -0.92
CSNK1E-215ENST00000612795 BAGE3Q86Y29 109 aa9.29□□□□□ -0.92
CSNK1E-215ENST00000612795 LIMD2Q9BT23 127 aa9.29□□□□□ -0.92
CSNK1E-215ENST00000612795 FLGP20930 4061 aaPredicted RBP9.28□□□□□ -0.92
CSNK1E-215ENST00000612795 Q6ZRX8 168 aa9.28□□□□□ -0.92
CSNK1E-215ENST00000612795 A0A096LNJ9 63 aa9.27□□□□□ -0.93
CSNK1E-215ENST00000612795 HBDP02042 147 aa9.26□□□□□ -0.93
CSNK1E-215ENST00000612795 DDTP30046 118 aa9.25□□□□□ -0.93
CSNK1E-215ENST00000612795 IGLV6-57P01721 117 aa9.24□□□□□ -0.93
CSNK1E-215ENST00000612795 CHTOPQ9Y3Y2 248 aaKnown RBP9.24□□□□□ -0.93
CSNK1E-215ENST00000612795 TMEM223A0PJW6 202 aa9.23□□□□□ -0.93
CSNK1E-215ENST00000612795 S100PP25815 95 aa9.23□□□□□ -0.93
CSNK1E-215ENST00000612795 HERV-K104P63124 156 aa9.23□□□□□ -0.93
CSNK1E-215ENST00000612795 FABP9Q0Z7S8 132 aa9.23□□□□□ -0.93
CSNK1E-215ENST00000612795 PMCHL1Q16048 86 aa9.23□□□□□ -0.93
CSNK1E-215ENST00000612795 HRCT1Q6UXD1 115 aa9.23□□□□□ -0.93
CSNK1E-215ENST00000612795 LINC00587B1AMM8 73 aa9.22□□□□□ -0.93
CSNK1E-215ENST00000612795 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
CSNK1E-215ENST00000612795 MAP1LC3CQ9BXW4 147 aa9.22□□□□□ -0.93
CSNK1E-215ENST00000612795 COX19Q49B96 90 aa9.21□□□□□ -0.94
CSNK1E-215ENST00000612795 TRBV10-2A0A0K0K1G8 114 aa9.19□□□□□ -0.94
CSNK1E-215ENST00000612795 LINC00614P0C842 121 aa9.19□□□□□ -0.94
CSNK1E-215ENST00000612795 ST20-AS1Q8NBB2 130 aa9.19□□□□□ -0.94
CSNK1E-215ENST00000612795 S100A7L2Q5SY68 101 aa9.18□□□□□ -0.94
CSNK1E-215ENST00000612795 URB1-AS1Q96HZ7 61 aa9.18□□□□□ -0.94
CSNK1E-215ENST00000612795 SEC11CQ9BY50 192 aa9.18□□□□□ -0.94
CSNK1E-215ENST00000612795 SPANXB1Q9NS25 103 aaPredicted RBP9.17□□□□□ -0.94
CSNK1E-215ENST00000612795 C18orf32Q8TCD1 76 aa9.16□□□□□ -0.94
CSNK1E-215ENST00000612795 TRAV23DV6A0A075B6W5 121 aa9.15□□□□□ -0.94
CSNK1E-215ENST00000612795 MYMXA0A1B0GTQ4 84 aa9.15□□□□□ -0.94
CSNK1E-215ENST00000612795 RPL37P61927 97 aaKnown RBP9.15□□□□□ -0.94
CSNK1E-215ENST00000612795 MIEN1Q9BRT3 115 aa9.15□□□□□ -0.94
CSNK1E-215ENST00000612795 SLC25A34Q6PIV7 304 aa9.14□□□□□ -0.95
CSNK1E-215ENST00000612795 LOC107984156A0A0G2JMH3 177 aa9.12□□□□□ -0.95
CSNK1E-215ENST00000612795 C5orf52A6NGY3 159 aa9.12□□□□□ -0.95
CSNK1E-215ENST00000612795 ZNF73O43830 326 aaPredicted RBP9.12□□□□□ -0.95
CSNK1E-215ENST00000612795 ARL17AQ8IVW1 177 aa9.12□□□□□ -0.95
CSNK1E-215ENST00000612795 TRAV12-1A0A0B4J245 112 aa9.11□□□□□ -0.95
CSNK1E-215ENST00000612795 HINT1P49773 126 aaPredicted RBP9.1□□□□□ -0.95
CSNK1E-215ENST00000612795 COMMD7Q86VX2 200 aa9.1□□□□□ -0.95
CSNK1E-215ENST00000612795 LAMTOR3Q9UHA4 124 aa9.1□□□□□ -0.95
CSNK1E-215ENST00000612795 SSPOA2VEC9 5147 aa9.09□□□□□ -0.96
CSNK1E-215ENST00000612795 H7C2G1 150 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms