RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 HIST1H2BBP33778 126 aa10.28□□□□□ -0.76
PRKN-209ENST00000612485 HIST1H2BDP58876 126 aa10.28□□□□□ -0.76
PRKN-209ENST00000612485 HIST1H2BCP62807 126 aa10.28□□□□□ -0.76
PRKN-209ENST00000612485 HIST2H2BEQ16778 126 aa10.28□□□□□ -0.76
PRKN-209ENST00000612485 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.28□□□□□ -0.76
PRKN-209ENST00000612485 KRTAP13-1Q8IUC0 172 aa10.28□□□□□ -0.76
PRKN-209ENST00000612485 HIST1H2BHQ93079 126 aa10.28□□□□□ -0.76
PRKN-209ENST00000612485 HIST1H2BNQ99877 126 aa10.28□□□□□ -0.76
PRKN-209ENST00000612485 HIST1H2BMQ99879 126 aa10.28□□□□□ -0.76
PRKN-209ENST00000612485 A0A087X002 238 aa10.27□□□□□ -0.77
PRKN-209ENST00000612485 TRAV12-1A0A0B4J245 112 aa10.27□□□□□ -0.77
PRKN-209ENST00000612485 LEPROTL1O95214 131 aa10.27□□□□□ -0.77
PRKN-209ENST00000612485 VPREB1P12018 145 aa10.27□□□□□ -0.77
PRKN-209ENST00000612485 S100A1P23297 94 aa10.27□□□□□ -0.77
PRKN-209ENST00000612485 PRR4Q16378 134 aa10.27□□□□□ -0.77
PRKN-209ENST00000612485 ZNF625Q96I27 306 aaPredicted RBP10.27□□□□□ -0.77
PRKN-209ENST00000612485 ATP6V1G1O75348 118 aa10.26□□□□□ -0.77
PRKN-209ENST00000612485 FABP4P15090 132 aa10.26□□□□□ -0.77
PRKN-209ENST00000612485 TYMSOSQ8TAI1 123 aa10.26□□□□□ -0.77
PRKN-209ENST00000612485 H0Y8G0 127 aa10.25□□□□□ -0.77
PRKN-209ENST00000612485 TSPAN13O95857 204 aa10.23□□□□□ -0.77
PRKN-209ENST00000612485 TMEM126AQ9H061 195 aa10.23□□□□□ -0.77
PRKN-209ENST00000612485 HSPB8Q9UJY1 196 aa10.23□□□□□ -0.77
PRKN-209ENST00000612485 TMEM223A0PJW6 202 aa10.22□□□□□ -0.77
PRKN-209ENST00000612485 LINC00158P58513 81 aa10.22□□□□□ -0.77
PRKN-209ENST00000612485 FAM229BQ4G0N7 80 aa10.22□□□□□ -0.77
PRKN-209ENST00000612485 FAM19A1Q7Z5A9 133 aa10.22□□□□□ -0.77
PRKN-209ENST00000612485 ANAPC11Q9NYG5 84 aa10.21□□□□□ -0.77
PRKN-209ENST00000612485 TMEM238C9JI98 176 aa10.2□□□□□ -0.78
PRKN-209ENST00000612485 PRLHP81277 87 aa10.2□□□□□ -0.78
PRKN-209ENST00000612485 M0R378 163 aa10.19□□□□□ -0.78
PRKN-209ENST00000612485 Q8NDZ9 215 aa10.19□□□□□ -0.78
PRKN-209ENST00000612485 KRTAP13-2Q52LG2 175 aa10.18□□□□□ -0.78
PRKN-209ENST00000612485 A0A0U1RRA0 63 aa10.17□□□□□ -0.78
PRKN-209ENST00000612485 PMCHL2Q9BQD1 86 aa10.17□□□□□ -0.78
PRKN-209ENST00000612485 MAP1LC3CQ9BXW4 147 aa10.17□□□□□ -0.78
PRKN-209ENST00000612485 IGKV2D-26A0A0A0MRZ7 120 aa10.16□□□□□ -0.78
PRKN-209ENST00000612485 SMIM13P0DJ93 91 aa10.15□□□□□ -0.78
PRKN-209ENST00000612485 HERV-K104P63124 156 aa10.15□□□□□ -0.78
PRKN-209ENST00000612485 MEIG1Q5JSS6 88 aa10.15□□□□□ -0.78
PRKN-209ENST00000612485 LINC00587B1AMM8 73 aa10.14□□□□□ -0.79
PRKN-209ENST00000612485 COA6Q5JTJ3 125 aaKnown RBP10.14□□□□□ -0.79
PRKN-209ENST00000612485 LINC00304Q8N9R0 145 aa10.14□□□□□ -0.79
PRKN-209ENST00000612485 DPM2O94777 84 aa10.13□□□□□ -0.79
PRKN-209ENST00000612485 PLNP26678 52 aa10.13□□□□□ -0.79
PRKN-209ENST00000612485 PLEKHB2Q96CS7 222 aa10.13□□□□□ -0.79
PRKN-209ENST00000612485 BOD1L2Q8IYS8 172 aa10.12□□□□□ -0.79
PRKN-209ENST00000612485 HIGD2AQ9BW72 106 aa10.12□□□□□ -0.79
PRKN-209ENST00000612485 MYMXA0A1B0GTQ4 84 aa10.11□□□□□ -0.79
PRKN-209ENST00000612485 SYS1-DBNDD2H3BUS1 97 aa10.11□□□□□ -0.79
PRKN-209ENST00000612485 IGKCP01834 107 aa10.11□□□□□ -0.79
PRKN-209ENST00000612485 MIR7-3HGQ8N6C7 128 aa10.11□□□□□ -0.79
PRKN-209ENST00000612485 NDUFA12Q9UI09 145 aa10.11□□□□□ -0.79
PRKN-209ENST00000612485 PRYO14603 147 aa10.1□□□□□ -0.79
PRKN-209ENST00000612485 CTAG1AP78358 180 aa10.09□□□□□ -0.79
PRKN-209ENST00000612485 NCR3O14931 201 aa10.08□□□□□ -0.8
PRKN-209ENST00000612485 ZNF706Q9Y5V0 76 aaPredicted RBP10.08□□□□□ -0.8
PRKN-209ENST00000612485 LEPROTO15243 131 aa10.07□□□□□ -0.8
PRKN-209ENST00000612485 C3orf79P0CE67 100 aa10.07□□□□□ -0.8
PRKN-209ENST00000612485 TSPEAR-AS2P59090 65 aa10.07□□□□□ -0.8
PRKN-209ENST00000612485 HERVK_113P61574 105 aa10.06□□□□□ -0.8
PRKN-209ENST00000612485 LINC01545Q5VT33 79 aa10.06□□□□□ -0.8
PRKN-209ENST00000612485 PET117Q6UWS5 81 aa10.06□□□□□ -0.8
PRKN-209ENST00000612485 LINC00337Q8N6G1 96 aa10.06□□□□□ -0.8
PRKN-209ENST00000612485 SPRR4Q96PI1 79 aa10.06□□□□□ -0.8
PRKN-209ENST00000612485 KCNQ1DNQ9H478 68 aa10.06□□□□□ -0.8
PRKN-209ENST00000612485 SPRR1AP35321 89 aa10.05□□□□□ -0.8
PRKN-209ENST00000612485 KRTDAPP60985 99 aa10.05□□□□□ -0.8
PRKN-209ENST00000612485 S100A12P80511 92 aa10.05□□□□□ -0.8
PRKN-209ENST00000612485 C3orf22Q8N5N4 141 aa10.05□□□□□ -0.8
PRKN-209ENST00000612485 RETNLBQ9BQ08 111 aa10.05□□□□□ -0.8
PRKN-209ENST00000612485 MUC2Q02817 5179 aa10.05□□□□□ -0.8
PRKN-209ENST00000612485 ETDCA0A1B0GVM5 59 aa10.04□□□□□ -0.8
PRKN-209ENST00000612485 J3QQQ9 107 aa10.04□□□□□ -0.8
PRKN-209ENST00000612485 TRBV10-3A0A0K0K1G6 114 aa10.02□□□□□ -0.81
PRKN-209ENST00000612485 SPAG11AQ6PDA7 123 aa10.02□□□□□ -0.81
PRKN-209ENST00000612485 LOC107984156A0A0G2JMH3 177 aa10.01□□□□□ -0.81
PRKN-209ENST00000612485 LGALS3P17931 250 aaKnown RBP10.01□□□□□ -0.81
PRKN-209ENST00000612485 NMUP48645 174 aa10.01□□□□□ -0.81
PRKN-209ENST00000612485 ARL17AQ8IVW1 177 aa10.01□□□□□ -0.81
PRKN-209ENST00000612485 SMCR5Q8TEV8 140 aa10.01□□□□□ -0.81
PRKN-209ENST00000612485 E9PLD3 99 aa10□□□□□ -0.81
PRKN-209ENST00000612485 KRTAP4-16G5E9R7 235 aaPredicted RBP10□□□□□ -0.81
PRKN-209ENST00000612485 HIST3H2BBQ8N257 126 aa10□□□□□ -0.81
PRKN-209ENST00000612485 DAND5Q8N907 189 aa10□□□□□ -0.81
PRKN-209ENST00000612485 IGLV7-46A0A075B6I9 117 aa9.99□□□□□ -0.81
PRKN-209ENST00000612485 TRBV10-2A0A0K0K1G8 114 aa9.99□□□□□ -0.81
PRKN-209ENST00000612485 A0A0U1RQV1 116 aa9.99□□□□□ -0.81
PRKN-209ENST00000612485 C4orf48Q5BLP8 95 aa9.99□□□□□ -0.81
PRKN-209ENST00000612485 MIEN1Q9BRT3 115 aa9.99□□□□□ -0.81
PRKN-209ENST00000612485 S100A6P06703 90 aa9.98□□□□□ -0.81
PRKN-209ENST00000612485 DDTP30046 118 aa9.98□□□□□ -0.81
PRKN-209ENST00000612485 TPRXLQ17RH7 258 aa9.98□□□□□ -0.81
PRKN-209ENST00000612485 S100A2P29034 98 aa9.97□□□□□ -0.81
PRKN-209ENST00000612485 SPANXB1Q9NS25 103 aaPredicted RBP9.97□□□□□ -0.81
PRKN-209ENST00000612485 C20orf202A1L168 122 aa9.96□□□□□ -0.82
PRKN-209ENST00000612485 HIST1H2BLQ99880 126 aa9.96□□□□□ -0.82
PRKN-209ENST00000612485 CDIP1Q9H305 208 aa9.96□□□□□ -0.82
PRKN-209ENST00000612485 PPDPFQ9H3Y8 114 aa9.96□□□□□ -0.82
PRKN-209ENST00000612485 B5MCH6 92 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms