RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 KRTAP26-1Q6PEX3 210 aa9.11□□□□□ -0.95
NEK3-205ENST00000610828 MUC7Q8TAX7 377 aa9.11□□□□□ -0.95
NEK3-205ENST00000610828 C1orf43Q9BWL3 253 aa9.11□□□□□ -0.95
NEK3-205ENST00000610828 C6orf48Q9UBA6 75 aa9.11□□□□□ -0.95
NEK3-205ENST00000610828 GVQW2A0A096LPI5 108 aaPredicted RBP9.1□□□□□ -0.95
NEK3-205ENST00000610828 TRAV10A0A0B4J240 114 aa9.1□□□□□ -0.95
NEK3-205ENST00000610828 S100A7L2Q5SY68 101 aa9.09□□□□□ -0.95
NEK3-205ENST00000610828 CAMK2N2Q96S95 79 aa9.09□□□□□ -0.95
NEK3-205ENST00000610828 IGKV2D-24A0A075B6R9 120 aa9.09□□□□□ -0.95
NEK3-205ENST00000610828 C22orf24Q9Y442 160 aa9.09□□□□□ -0.95
NEK3-205ENST00000610828 SNCGO76070 127 aa9.08□□□□□ -0.96
NEK3-205ENST00000610828 MGAM2Q2M2H8 2515 aa9.08□□□□□ -0.96
NEK3-205ENST00000610828 C15orf56Q8N910 161 aa9.07□□□□□ -0.96
NEK3-205ENST00000610828 C15orf53Q8NAA6 179 aa9.07□□□□□ -0.96
NEK3-205ENST00000610828 XAGE1AQ9HD64 81 aa9.07□□□□□ -0.96
NEK3-205ENST00000610828 SLPIP03973 132 aa9.06□□□□□ -0.96
NEK3-205ENST00000610828 DNAH10OSP0CZ25 163 aa9.06□□□□□ -0.96
NEK3-205ENST00000610828 RPL18AQ02543 176 aaKnown RBP9.06□□□□□ -0.96
NEK3-205ENST00000610828 FAM240AA0A1B0GVK7 77 aa9.05□□□□□ -0.96
NEK3-205ENST00000610828 C6orf99Q4VX62 202 aa9.05□□□□□ -0.96
NEK3-205ENST00000610828 Q6ZRU5 148 aa9.05□□□□□ -0.96
NEK3-205ENST00000610828 LINC00588Q9Y4M8 146 aa9.05□□□□□ -0.96
NEK3-205ENST00000610828 TTC32Q5I0X7 151 aa9.04□□□□□ -0.96
NEK3-205ENST00000610828 INAFM2P0DMQ5 153 aa9.03□□□□□ -0.96
NEK3-205ENST00000610828 C2orf48Q96LS8 159 aa9.03□□□□□ -0.96
NEK3-205ENST00000610828 ORMDL1Q9P0S3 153 aa9.03□□□□□ -0.96
NEK3-205ENST00000610828 GAGE2BQ13066 116 aa9.02□□□□□ -0.96
NEK3-205ENST00000610828 GAGE2EQ4V326 116 aa9.02□□□□□ -0.96
NEK3-205ENST00000610828 Q8N814 137 aa9.02□□□□□ -0.96
NEK3-205ENST00000610828 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.96
NEK3-205ENST00000610828 C9orf129Q5T035 196 aaKnown RBP9.02□□□□□ -0.97
NEK3-205ENST00000610828 IGLV6-57P01721 117 aa9.01□□□□□ -0.97
NEK3-205ENST00000610828 A0A1B0GX51 115 aa9.01□□□□□ -0.97
NEK3-205ENST00000610828 NDUFC2-KCTD14E9PQ53 114 aa9□□□□□ -0.97
NEK3-205ENST00000610828 TRBV10-3A0A0K0K1G6 114 aa9□□□□□ -0.97
NEK3-205ENST00000610828 ACYP1P07311 99 aa9□□□□□ -0.97
NEK3-205ENST00000610828 MDFIQ99750 246 aa8.99□□□□□ -0.97
NEK3-205ENST00000610828 DNAH1Q9P2D7 4330 aa8.99□□□□□ -0.97
NEK3-205ENST00000610828 GAGE2AQ6NT46 116 aa8.99□□□□□ -0.97
NEK3-205ENST00000610828 LINC00167Q96N53 147 aa8.99□□□□□ -0.97
NEK3-205ENST00000610828 C14orf132Q9NPU4 83 aa8.99□□□□□ -0.97
NEK3-205ENST00000610828 SYCNQ0VAF6 134 aa8.98□□□□□ -0.97
NEK3-205ENST00000610828 ANAPC13Q9BS18 74 aa8.98□□□□□ -0.97
NEK3-205ENST00000610828 COL7A1Q02388 2944 aa8.97□□□□□ -0.97
NEK3-205ENST00000610828 LYSTQ99698 3801 aa8.97□□□□□ -0.97
NEK3-205ENST00000610828 TRAV23DV6A0A075B6W5 121 aa8.97□□□□□ -0.97
NEK3-205ENST00000610828 VPREB1P12018 145 aa8.97□□□□□ -0.97
NEK3-205ENST00000610828 LINC00575Q6W349 94 aa8.97□□□□□ -0.97
NEK3-205ENST00000610828 Q6ZRP5 223 aa8.97□□□□□ -0.97
NEK3-205ENST00000610828 F8WDY8 70 aa8.96□□□□□ -0.98
NEK3-205ENST00000610828 OBSCN-AS1Q96MR7 158 aa8.96□□□□□ -0.98
NEK3-205ENST00000610828 TMEM256-PLSCR3K7ERE1 68 aa8.95□□□□□ -0.98
NEK3-205ENST00000610828 Q6Q795 121 aa8.95□□□□□ -0.98
NEK3-205ENST00000610828 DNAH9Q9NYC9 4486 aa8.95□□□□□ -0.98
NEK3-205ENST00000610828 hADV29S1A0JD25 119 aa8.95□□□□□ -0.98
NEK3-205ENST00000610828 CASC10Q5T4H9 136 aa8.95□□□□□ -0.98
NEK3-205ENST00000610828 SS18L2Q9UHA2 77 aa8.95□□□□□ -0.98
NEK3-205ENST00000610828 SMCR5Q8TEV8 140 aa8.94□□□□□ -0.98
NEK3-205ENST00000610828 DIRC1Q969H9 104 aa8.94□□□□□ -0.98
NEK3-205ENST00000610828 NDUFV3P56181 108 aaKnown RBP8.94□□□□□ -0.98
NEK3-205ENST00000610828 STAB2Q8WWQ8 2551 aa8.94□□□□□ -0.98
NEK3-205ENST00000610828 USP17L23D6RBM5 183 aa8.93□□□□□ -0.98
NEK3-205ENST00000610828 M0R378 163 aa8.93□□□□□ -0.98
NEK3-205ENST00000610828 ZNF73O43830 326 aaPredicted RBP8.93□□□□□ -0.98
NEK3-205ENST00000610828 UPK3BQ9BT76 320 aa8.93□□□□□ -0.98
NEK3-205ENST00000610828 RMI2Q96E14 147 aa8.93□□□□□ -0.98
NEK3-205ENST00000610828 NHLRC4P0CG21 123 aaPredicted RBP8.91□□□□□ -0.98
NEK3-205ENST00000610828 JMJD7-PLA2G4BH0Y9G9 81 aa8.91□□□□□ -0.98
NEK3-205ENST00000610828 Q6ZQY7 126 aa8.9□□□□□ -0.98
NEK3-205ENST00000610828 TRBV7-7A0A0K0K1E9 115 aa8.9□□□□□ -0.99
NEK3-205ENST00000610828 LINC00643Q86TS7 51 aa8.9□□□□□ -0.99
NEK3-205ENST00000610828 COX7BP24311 80 aa8.89□□□□□ -0.99
NEK3-205ENST00000610828 SDIM1Q6ZPB5 146 aa8.89□□□□□ -0.99
NEK3-205ENST00000610828 ELOF1P60002 83 aaKnown RBP8.88□□□□□ -0.99
NEK3-205ENST00000610828 C5orf47Q569G3 176 aa8.88□□□□□ -0.99
NEK3-205ENST00000610828 SMIM20Q8N5G0 67 aa8.88□□□□□ -0.99
NEK3-205ENST00000610828 NKAPP1Q8N9T2 125 aa8.88□□□□□ -0.99
NEK3-205ENST00000610828 TLX1NBP0CAT3 122 aa8.87□□□□□ -0.99
NEK3-205ENST00000610828 SERTAD4-AS1Q5TG53 156 aa8.87□□□□□ -0.99
NEK3-205ENST00000610828 B9D2Q9BPU9 175 aa8.87□□□□□ -0.99
NEK3-205ENST00000610828 DNAH10Q8IVF4 4471 aa8.87□□□□□ -0.99
NEK3-205ENST00000610828 TRBV7-6A0A0J9YX20 115 aa8.86□□□□□ -0.99
NEK3-205ENST00000610828 CCKP06307 115 aa8.86□□□□□ -0.99
NEK3-205ENST00000610828 LAMTOR3Q9UHA4 124 aa8.86□□□□□ -0.99
NEK3-205ENST00000610828 UBE2DNLQ8IWF7 75 aa8.86□□□□□ -0.99
NEK3-205ENST00000610828 LINC00846Q9NV44 126 aa8.86□□□□□ -0.99
NEK3-205ENST00000610828 KRTAP1-5Q9BYS1 174 aa8.85□□□□□ -0.99
NEK3-205ENST00000610828 CSMD3Q7Z407 3707 aa8.84□□□□□ -0.99
NEK3-205ENST00000610828 FAM236AA0A1B0GUQ0 79 aa8.84□□□□□ -0.99
NEK3-205ENST00000610828 FAM236BA0A1B0GV22 79 aa8.84□□□□□ -0.99
NEK3-205ENST00000610828 RBM3P98179 157 aaKnown RBP8.84□□□□□ -0.99
NEK3-205ENST00000610828 C7orf33Q8WU49 177 aa8.84□□□□□ -0.99
NEK3-205ENST00000610828 APLNQ9ULZ1 77 aa8.84□□□□□ -0.99
NEK3-205ENST00000610828 FAM168BA1KXE4 195 aa8.83□□□□□ -1
NEK3-205ENST00000610828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.83□□□□□ -1
NEK3-205ENST00000610828 IMUPQ9GZP8 106 aa8.83□□□□□ -1
NEK3-205ENST00000610828 CCDC179H3BU77 68 aa8.83□□□□□ -1
NEK3-205ENST00000610828 DNAH7Q8WXX0 4024 aa8.82□□□□□ -1
NEK3-205ENST00000610828 DYNC2H1Q8NCM8 4307 aaKnown RBP8.82□□□□□ -1
NEK3-205ENST00000610828 LINC00528Q8N1L1 170 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms