RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 HIST1H2BKO60814 126 aa11.57□□□□□ -0.56
SGMS1-208ENST00000608287 HIST1H2BJP06899 126 aa11.57□□□□□ -0.56
SGMS1-208ENST00000608287 HIST1H2BOP23527 126 aa11.57□□□□□ -0.56
SGMS1-208ENST00000608287 PLNP26678 52 aa11.57□□□□□ -0.56
SGMS1-208ENST00000608287 HIST1H2BBP33778 126 aa11.57□□□□□ -0.56
SGMS1-208ENST00000608287 HIST1H2BDP58876 126 aa11.57□□□□□ -0.56
SGMS1-208ENST00000608287 HIST1H2BCP62807 126 aa11.57□□□□□ -0.56
SGMS1-208ENST00000608287 PRR4Q16378 134 aa11.57□□□□□ -0.56
SGMS1-208ENST00000608287 HIST2H2BEQ16778 126 aa11.57□□□□□ -0.56
SGMS1-208ENST00000608287 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.57□□□□□ -0.56
SGMS1-208ENST00000608287 HIST1H2BHQ93079 126 aa11.57□□□□□ -0.56
SGMS1-208ENST00000608287 HIST1H2BNQ99877 126 aa11.57□□□□□ -0.56
SGMS1-208ENST00000608287 HIST1H2BMQ99879 126 aa11.57□□□□□ -0.56
SGMS1-208ENST00000608287 A0A0U1RRA0 63 aa11.56□□□□□ -0.56
SGMS1-208ENST00000608287 DPM2O94777 84 aa11.55□□□□□ -0.56
SGMS1-208ENST00000608287 PMCHL2Q9BQD1 86 aa11.55□□□□□ -0.56
SGMS1-208ENST00000608287 MAP1LC3CQ9BXW4 147 aa11.55□□□□□ -0.56
SGMS1-208ENST00000608287 ZNF861PO60384 105 aa11.54□□□□□ -0.56
SGMS1-208ENST00000608287 BCE1O60756 84 aa11.54□□□□□ -0.56
SGMS1-208ENST00000608287 VPREB1P12018 145 aa11.54□□□□□ -0.56
SGMS1-208ENST00000608287 RPL24P83731 157 aaKnown RBP11.54□□□□□ -0.56
SGMS1-208ENST00000608287 MEIG1Q5JSS6 88 aa11.54□□□□□ -0.56
SGMS1-208ENST00000608287 NDUFA12Q9UI09 145 aa11.54□□□□□ -0.56
SGMS1-208ENST00000608287 ATP6V1G1O75348 118 aa11.53□□□□□ -0.56
SGMS1-208ENST00000608287 SMIM13P0DJ93 91 aa11.53□□□□□ -0.56
SGMS1-208ENST00000608287 HERV-K104P63124 156 aa11.53□□□□□ -0.56
SGMS1-208ENST00000608287 IGLV1-50A0A075B6I6 118 aa11.52□□□□□ -0.57
SGMS1-208ENST00000608287 IGKV2-28A0A075B6P5 120 aa11.52□□□□□ -0.57
SGMS1-208ENST00000608287 IGKV2D-28P01615 120 aa11.52□□□□□ -0.57
SGMS1-208ENST00000608287 IGKCP01834 107 aa11.52□□□□□ -0.57
SGMS1-208ENST00000608287 PRR26Q8N8Z3 221 aa11.52□□□□□ -0.57
SGMS1-208ENST00000608287 MYMXA0A1B0GTQ4 84 aa11.51□□□□□ -0.57
SGMS1-208ENST00000608287 LEPROTO15243 131 aa11.51□□□□□ -0.57
SGMS1-208ENST00000608287 HERVK_113P61574 105 aa11.51□□□□□ -0.57
SGMS1-208ENST00000608287 RPL28P46779 137 aaKnown RBP11.5□□□□□ -0.57
SGMS1-208ENST00000608287 TSPEAR-AS2P59090 65 aa11.5□□□□□ -0.57
SGMS1-208ENST00000608287 Q8NDZ9 215 aa11.5□□□□□ -0.57
SGMS1-208ENST00000608287 PLEKHB2Q96CS7 222 aa11.5□□□□□ -0.57
SGMS1-208ENST00000608287 LINC00587B1AMM8 73 aa11.49□□□□□ -0.57
SGMS1-208ENST00000608287 KRTAP1-4P0C5Y4 121 aa11.48□□□□□ -0.57
SGMS1-208ENST00000608287 RPL13AP40429 203 aaKnown RBP11.48□□□□□ -0.57
SGMS1-208ENST00000608287 MIR7-3HGQ8N6C7 128 aa11.48□□□□□ -0.57
SGMS1-208ENST00000608287 J3QQQ9 107 aa11.47□□□□□ -0.57
SGMS1-208ENST00000608287 SYS1-DBNDD2H3BUS1 97 aa11.46□□□□□ -0.57
SGMS1-208ENST00000608287 LGALS3P17931 250 aaKnown RBP11.46□□□□□ -0.57
SGMS1-208ENST00000608287 UBE2AP49459 152 aa11.46□□□□□ -0.57
SGMS1-208ENST00000608287 BOD1L2Q8IYS8 172 aa11.45□□□□□ -0.58
SGMS1-208ENST00000608287 TMEM238C9JI98 176 aa11.44□□□□□ -0.58
SGMS1-208ENST00000608287 TMEM126AQ9H061 195 aa11.44□□□□□ -0.58
SGMS1-208ENST00000608287 NMUP48645 174 aa11.43□□□□□ -0.58
SGMS1-208ENST00000608287 M0R378 163 aa11.42□□□□□ -0.58
SGMS1-208ENST00000608287 FAM19A1Q7Z5A9 133 aa11.42□□□□□ -0.58
SGMS1-208ENST00000608287 COA6Q5JTJ3 125 aaKnown RBP11.41□□□□□ -0.58
SGMS1-208ENST00000608287 KRTAP13-1Q8IUC0 172 aa11.41□□□□□ -0.58
SGMS1-208ENST00000608287 DAND5Q8N907 189 aa11.41□□□□□ -0.58
SGMS1-208ENST00000608287 E9PLD3 99 aa11.4□□□□□ -0.58
SGMS1-208ENST00000608287 NCR3O14931 201 aa11.4□□□□□ -0.58
SGMS1-208ENST00000608287 LINC01545Q5VT33 79 aa11.4□□□□□ -0.58
SGMS1-208ENST00000608287 PET117Q6UWS5 81 aa11.4□□□□□ -0.58
SGMS1-208ENST00000608287 PRLHP81277 87 aa11.39□□□□□ -0.59
SGMS1-208ENST00000608287 C3orf79P0CE67 100 aa11.38□□□□□ -0.59
SGMS1-208ENST00000608287 KRTDAPP60985 99 aa11.37□□□□□ -0.59
SGMS1-208ENST00000608287 IGKV2D-26A0A0A0MRZ7 120 aa11.36□□□□□ -0.59
SGMS1-208ENST00000608287 S100A1P23297 94 aa11.36□□□□□ -0.59
SGMS1-208ENST00000608287 MIEN1Q9BRT3 115 aa11.36□□□□□ -0.59
SGMS1-208ENST00000608287 A0A0J9YXY3 114 aa11.34□□□□□ -0.59
SGMS1-208ENST00000608287 LOC107984156A0A0G2JMH3 177 aa11.33□□□□□ -0.6
SGMS1-208ENST00000608287 PRYO14603 147 aa11.33□□□□□ -0.6
SGMS1-208ENST00000608287 CRYGAP11844 174 aa11.33□□□□□ -0.6
SGMS1-208ENST00000608287 ARL17AQ8IVW1 177 aa11.33□□□□□ -0.6
SGMS1-208ENST00000608287 ANAPC11Q9NYG5 84 aa11.33□□□□□ -0.6
SGMS1-208ENST00000608287 A0A087X002 238 aa11.32□□□□□ -0.6
SGMS1-208ENST00000608287 TRBV10-3A0A0K0K1G6 114 aa11.31□□□□□ -0.6
SGMS1-208ENST00000608287 HIGD2AQ9BW72 106 aa11.31□□□□□ -0.6
SGMS1-208ENST00000608287 C20orf202A1L168 122 aa11.3□□□□□ -0.6
SGMS1-208ENST00000608287 NPC2P61916 151 aa11.3□□□□□ -0.6
SGMS1-208ENST00000608287 ADAMTSL4-AS1Q5T5F5 129 aa11.3□□□□□ -0.6
SGMS1-208ENST00000608287 KCNQ1DNQ9H478 68 aa11.3□□□□□ -0.6
SGMS1-208ENST00000608287 S100A12P80511 92 aa11.29□□□□□ -0.6
SGMS1-208ENST00000608287 TYMSOSQ8TAI1 123 aa11.29□□□□□ -0.6
SGMS1-208ENST00000608287 TRBV10-2A0A0K0K1G8 114 aa11.28□□□□□ -0.6
SGMS1-208ENST00000608287 ZNF815PA8K554 130 aa11.28□□□□□ -0.6
SGMS1-208ENST00000608287 DDTP30046 118 aa11.28□□□□□ -0.6
SGMS1-208ENST00000608287 SPANXB1Q9NS25 103 aaPredicted RBP11.28□□□□□ -0.6
SGMS1-208ENST00000608287 ETDCA0A1B0GVM5 59 aa11.27□□□□□ -0.61
SGMS1-208ENST00000608287 NDUFC2O95298 119 aa11.27□□□□□ -0.61
SGMS1-208ENST00000608287 SPRR1AP35321 89 aa11.27□□□□□ -0.61
SGMS1-208ENST00000608287 SOSTDC1Q6X4U4 206 aa11.27□□□□□ -0.61
SGMS1-208ENST00000608287 LINC00337Q8N6G1 96 aa11.27□□□□□ -0.61
SGMS1-208ENST00000608287 FAM229BQ4G0N7 80 aa11.26□□□□□ -0.61
SGMS1-208ENST00000608287 TTTY13Q9BZ97 58 aa11.26□□□□□ -0.61
SGMS1-208ENST00000608287 EIF4EBP3O60516 100 aaPredicted RBP11.25□□□□□ -0.61
SGMS1-208ENST00000608287 S100A7L2Q5SY68 101 aa11.25□□□□□ -0.61
SGMS1-208ENST00000608287 TIMM17BO60830 172 aa11.24□□□□□ -0.61
SGMS1-208ENST00000608287 KRTAP13-2Q52LG2 175 aa11.24□□□□□ -0.61
SGMS1-208ENST00000608287 LCE2DQ5TA82 110 aaPredicted RBP11.24□□□□□ -0.61
SGMS1-208ENST00000608287 ATOH7Q8N100 152 aa11.24□□□□□ -0.61
SGMS1-208ENST00000608287 LITAFQ99732 161 aa11.24□□□□□ -0.61
SGMS1-208ENST00000608287 CRCT1Q9UGL9 99 aa11.24□□□□□ -0.61
SGMS1-208ENST00000608287 KRTAP4-16G5E9R7 235 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms