RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 A0A0U1RRA0 63 aa8.23□□□□□ -1.09
CTSA-218ENST00000607814 FABP4P15090 132 aa8.23□□□□□ -1.09
CTSA-218ENST00000607814 MRPL55Q7Z7F7 128 aaKnown RBP8.22□□□□□ -1.09
CTSA-218ENST00000607814 LINC00167Q96N53 147 aa8.22□□□□□ -1.09
CTSA-218ENST00000607814 ERG28Q9UKR5 140 aa8.22□□□□□ -1.09
CTSA-218ENST00000607814 TRAV12-1A0A0B4J245 112 aa8.21□□□□□ -1.1
CTSA-218ENST00000607814 KRTAP9-6A0A140TA67 174 aa8.21□□□□□ -1.1
CTSA-218ENST00000607814 TMEM223A0PJW6 202 aa8.21□□□□□ -1.1
CTSA-218ENST00000607814 HIST1H2BLQ99880 126 aa8.21□□□□□ -1.1
CTSA-218ENST00000607814 HSPB8Q9UJY1 196 aa8.21□□□□□ -1.1
CTSA-218ENST00000607814 LEPROTL1O95214 131 aa8.2□□□□□ -1.1
CTSA-218ENST00000607814 LBHQ53QV2 105 aaPredicted RBP8.2□□□□□ -1.1
CTSA-218ENST00000607814 PRR26Q8N8Z3 221 aa8.2□□□□□ -1.1
CTSA-218ENST00000607814 Q8NDZ9 215 aa8.2□□□□□ -1.1
CTSA-218ENST00000607814 DIRC1Q969H9 104 aa8.2□□□□□ -1.1
CTSA-218ENST00000607814 PMCHL2Q9BQD1 86 aa8.2□□□□□ -1.1
CTSA-218ENST00000607814 SND1-IT1Q9HBX3 110 aa8.2□□□□□ -1.1
CTSA-218ENST00000607814 H0Y9J4 135 aa8.19□□□□□ -1.1
CTSA-218ENST00000607814 LINC00158P58513 81 aa8.18□□□□□ -1.1
CTSA-218ENST00000607814 IGKV2-28A0A075B6P5 120 aa8.17□□□□□ -1.1
CTSA-218ENST00000607814 LOC105371267A0A1B0GV96 52 aa8.17□□□□□ -1.1
CTSA-218ENST00000607814 IGKV2D-28P01615 120 aa8.17□□□□□ -1.1
CTSA-218ENST00000607814 NKAPP1Q8N9T2 125 aa8.17□□□□□ -1.1
CTSA-218ENST00000607814 TP73-AS1Q9UF72 201 aa8.17□□□□□ -1.1
CTSA-218ENST00000607814 ZNF861PO60384 105 aa8.16□□□□□ -1.1
CTSA-218ENST00000607814 MAP1LC3CQ9BXW4 147 aa8.16□□□□□ -1.1
CTSA-218ENST00000607814 KRTAP1-4P0C5Y4 121 aa8.15□□□□□ -1.1
CTSA-218ENST00000607814 SMIM13P0DJ93 91 aa8.15□□□□□ -1.1
CTSA-218ENST00000607814 VPREB1P12018 145 aa8.15□□□□□ -1.1
CTSA-218ENST00000607814 AKR1D1P51857 326 aa8.15□□□□□ -1.1
CTSA-218ENST00000607814 TSPEAR-AS2P59090 65 aa8.15□□□□□ -1.1
CTSA-218ENST00000607814 IGLV5-37A0A075B6J1 123 aa8.14□□□□□ -1.11
CTSA-218ENST00000607814 BCE1O60756 84 aa8.14□□□□□ -1.11
CTSA-218ENST00000607814 TMEM238C9JI98 176 aa8.13□□□□□ -1.11
CTSA-218ENST00000607814 COX17Q14061 63 aa8.13□□□□□ -1.11
CTSA-218ENST00000607814 MEIG1Q5JSS6 88 aa8.13□□□□□ -1.11
CTSA-218ENST00000607814 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
CTSA-218ENST00000607814 PET117Q6UWS5 81 aa8.13□□□□□ -1.11
CTSA-218ENST00000607814 ANAPC11Q9NYG5 84 aa8.13□□□□□ -1.11
CTSA-218ENST00000607814 C20orf202A1L168 122 aa8.12□□□□□ -1.11
CTSA-218ENST00000607814 C3orf79P0CE67 100 aa8.12□□□□□ -1.11
CTSA-218ENST00000607814 NDUFA12Q9UI09 145 aa8.12□□□□□ -1.11
CTSA-218ENST00000607814 SYS1-DBNDD2H3BUS1 97 aa8.11□□□□□ -1.11
CTSA-218ENST00000607814 KRTDAPP60985 99 aa8.11□□□□□ -1.11
CTSA-218ENST00000607814 MIR7-3HGQ8N6C7 128 aa8.11□□□□□ -1.11
CTSA-218ENST00000607814 IGLV1-50A0A075B6I6 118 aa8.1□□□□□ -1.11
CTSA-218ENST00000607814 DPM2O94777 84 aa8.1□□□□□ -1.11
CTSA-218ENST00000607814 UBE2AP49459 152 aa8.1□□□□□ -1.11
CTSA-218ENST00000607814 PRLHP81277 87 aa8.1□□□□□ -1.11
CTSA-218ENST00000607814 RPL24P83731 157 aaKnown RBP8.1□□□□□ -1.11
CTSA-218ENST00000607814 JOSD1Q15040 202 aaPredicted RBP8.1□□□□□ -1.11
CTSA-218ENST00000607814 DAND5Q8N907 189 aa8.1□□□□□ -1.11
CTSA-218ENST00000607814 IGKCP01834 107 aa8.09□□□□□ -1.11
CTSA-218ENST00000607814 RPL28P46779 137 aaKnown RBP8.09□□□□□ -1.11
CTSA-218ENST00000607814 SFTA2Q6UW10 78 aa8.09□□□□□ -1.11
CTSA-218ENST00000607814 MYMXA0A1B0GTQ4 84 aa8.08□□□□□ -1.12
CTSA-218ENST00000607814 NCR3O14931 201 aa8.08□□□□□ -1.12
CTSA-218ENST00000607814 LEPROTO15243 131 aa8.08□□□□□ -1.12
CTSA-218ENST00000607814 SMIM6P0DI80 62 aa8.08□□□□□ -1.12
CTSA-218ENST00000607814 PLNP26678 52 aa8.08□□□□□ -1.12
CTSA-218ENST00000607814 PRR4Q16378 134 aa8.08□□□□□ -1.12
CTSA-218ENST00000607814 LINC01545Q5VT33 79 aa8.08□□□□□ -1.12
CTSA-218ENST00000607814 FAM19A1Q7Z5A9 133 aa8.08□□□□□ -1.12
CTSA-218ENST00000607814 BOD1L2Q8IYS8 172 aa8.08□□□□□ -1.12
CTSA-218ENST00000607814 J3QQQ9 107 aa8.07□□□□□ -1.12
CTSA-218ENST00000607814 M0R378 163 aa8.07□□□□□ -1.12
CTSA-218ENST00000607814 SCGB1D1O95968 90 aa8.07□□□□□ -1.12
CTSA-218ENST00000607814 KRTAP13-1Q8IUC0 172 aa8.07□□□□□ -1.12
CTSA-218ENST00000607814 TMEM126AQ9H061 195 aa8.07□□□□□ -1.12
CTSA-218ENST00000607814 A0A087X002 238 aa8.06□□□□□ -1.12
CTSA-218ENST00000607814 HERV-K104P63124 156 aa8.06□□□□□ -1.12
CTSA-218ENST00000607814 PLEKHB2Q96CS7 222 aa8.06□□□□□ -1.12
CTSA-218ENST00000607814 LGALS3P17931 250 aaKnown RBP8.05□□□□□ -1.12
CTSA-218ENST00000607814 HERVK_113P61574 105 aa8.05□□□□□ -1.12
CTSA-218ENST00000607814 PYY3Q5JQD4 70 aa8.05□□□□□ -1.12
CTSA-218ENST00000607814 RPL13AP40429 203 aaKnown RBP8.04□□□□□ -1.12
CTSA-218ENST00000607814 NPC2P61916 151 aa8.03□□□□□ -1.12
CTSA-218ENST00000607814 TSPAN13O95857 204 aa8.02□□□□□ -1.13
CTSA-218ENST00000607814 S100A12P80511 92 aa8.02□□□□□ -1.13
CTSA-218ENST00000607814 EIF4EBP3O60516 100 aaPredicted RBP8.01□□□□□ -1.13
CTSA-218ENST00000607814 ADAMTSL4-AS1Q5T5F5 129 aa8.01□□□□□ -1.13
CTSA-218ENST00000607814 HIGD2AQ9BW72 106 aa8.01□□□□□ -1.13
CTSA-218ENST00000607814 TTTY13Q9BZ97 58 aa8.01□□□□□ -1.13
CTSA-218ENST00000607814 TRBV10-3A0A0K0K1G6 114 aa8□□□□□ -1.13
CTSA-218ENST00000607814 LINC00587B1AMM8 73 aa8□□□□□ -1.13
CTSA-218ENST00000607814 HSBP1L1C9JCN9 74 aa8□□□□□ -1.13
CTSA-218ENST00000607814 E9PLD3 99 aa8□□□□□ -1.13
CTSA-218ENST00000607814 CRYGAP11844 174 aa8□□□□□ -1.13
CTSA-218ENST00000607814 KRTAP13-2Q52LG2 175 aa8□□□□□ -1.13
CTSA-218ENST00000607814 A0A0J9YXY3 114 aa7.99□□□□□ -1.13
CTSA-218ENST00000607814 SOSTDC1Q6X4U4 206 aa7.99□□□□□ -1.13
CTSA-218ENST00000607814 TYMSOSQ8TAI1 123 aa7.99□□□□□ -1.13
CTSA-218ENST00000607814 VAMP8Q9BV40 100 aa7.99□□□□□ -1.13
CTSA-218ENST00000607814 IGKV2D-26A0A0A0MRZ7 120 aa7.98□□□□□ -1.13
CTSA-218ENST00000607814 NMUP48645 174 aa7.98□□□□□ -1.13
CTSA-218ENST00000607814 LINC00518Q8N0U6 118 aa7.98□□□□□ -1.13
CTSA-218ENST00000607814 C12orf57Q99622 126 aa7.98□□□□□ -1.13
CTSA-218ENST00000607814 ATOH7Q8N100 152 aa7.96□□□□□ -1.14
CTSA-218ENST00000607814 PRYO14603 147 aa7.95□□□□□ -1.14
CTSA-218ENST00000607814 MIEN1Q9BRT3 115 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms