RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 REG3GQ6UW15 175 aa6.1□□□□□ -1.43
CTSA-215ENST00000607187 PRR26Q8N8Z3 221 aa6.1□□□□□ -1.43
CTSA-215ENST00000607187 CHTOPQ9Y3Y2 248 aaKnown RBP6.1□□□□□ -1.43
CTSA-215ENST00000607187 IGLV7-43P04211 117 aa6.09□□□□□ -1.43
CTSA-215ENST00000607187 TMEM170BQ5T4T1 132 aa6.09□□□□□ -1.43
CTSA-215ENST00000607187 XP32Q5T750 250 aa6.09□□□□□ -1.43
CTSA-215ENST00000607187 FAM19A2Q8N3H0 131 aa6.09□□□□□ -1.43
CTSA-215ENST00000607187 C22orf24Q9Y442 160 aa6.09□□□□□ -1.43
CTSA-215ENST00000607187 UBE2BP63146 152 aa6.08□□□□□ -1.44
CTSA-215ENST00000607187 TP73-AS1Q9UF72 201 aa6.08□□□□□ -1.44
CTSA-215ENST00000607187 TMEM223A0PJW6 202 aa6.07□□□□□ -1.44
CTSA-215ENST00000607187 SERF1AO75920 110 aa6.07□□□□□ -1.44
CTSA-215ENST00000607187 HERV-K104P63124 156 aa6.07□□□□□ -1.44
CTSA-215ENST00000607187 KRTAP10-8P60410 259 aa6.06□□□□□ -1.44
CTSA-215ENST00000607187 COX17Q14061 63 aa6.06□□□□□ -1.44
CTSA-215ENST00000607187 SFTA2Q6UW10 78 aa6.06□□□□□ -1.44
CTSA-215ENST00000607187 MRPL55Q7Z7F7 128 aaKnown RBP6.06□□□□□ -1.44
CTSA-215ENST00000607187 DIRC1Q969H9 104 aa6.06□□□□□ -1.44
CTSA-215ENST00000607187 ZNF625Q96I27 306 aaPredicted RBP6.06□□□□□ -1.44
CTSA-215ENST00000607187 ERG28Q9UKR5 140 aa6.06□□□□□ -1.44
CTSA-215ENST00000607187 IGLV5-37A0A075B6J1 123 aa6.05□□□□□ -1.44
CTSA-215ENST00000607187 NUPR1O60356 82 aa6.05□□□□□ -1.44
CTSA-215ENST00000607187 LEPROTL1O95214 131 aa6.05□□□□□ -1.44
CTSA-215ENST00000607187 PFN2P35080 140 aa6.05□□□□□ -1.44
CTSA-215ENST00000607187 H0Y9J4 135 aa6.04□□□□□ -1.44
CTSA-215ENST00000607187 RPL24P83731 157 aaKnown RBP6.04□□□□□ -1.44
CTSA-215ENST00000607187 SCO1O75880 301 aa6.03□□□□□ -1.44
CTSA-215ENST00000607187 LINC00167Q96N53 147 aa6.03□□□□□ -1.44
CTSA-215ENST00000607187 SND1-IT1Q9HBX3 110 aa6.03□□□□□ -1.44
CTSA-215ENST00000607187 HSPB8Q9UJY1 196 aa6.03□□□□□ -1.44
CTSA-215ENST00000607187 RPL37AP8A6NKH3 93 aa6.02□□□□□ -1.45
CTSA-215ENST00000607187 H0Y8G0 127 aa6.02□□□□□ -1.45
CTSA-215ENST00000607187 ZNF861PO60384 105 aa6.02□□□□□ -1.45
CTSA-215ENST00000607187 NKAPP1Q8N9T2 125 aa6.02□□□□□ -1.45
CTSA-215ENST00000607187 BCE1O60756 84 aa6.01□□□□□ -1.45
CTSA-215ENST00000607187 FABP4P15090 132 aa6.01□□□□□ -1.45
CTSA-215ENST00000607187 HMCN2Q8NDA2 5059 aa6□□□□□ -1.45
CTSA-215ENST00000607187 HIST1H2BKO60814 126 aa6□□□□□ -1.45
CTSA-215ENST00000607187 HIST1H2BJP06899 126 aa6□□□□□ -1.45
CTSA-215ENST00000607187 KRTAP1-4P0C5Y4 121 aa6□□□□□ -1.45
CTSA-215ENST00000607187 HIST1H2BOP23527 126 aa6□□□□□ -1.45
CTSA-215ENST00000607187 PLNP26678 52 aa6□□□□□ -1.45
CTSA-215ENST00000607187 HIST1H2BBP33778 126 aa6□□□□□ -1.45
CTSA-215ENST00000607187 HIST1H2BDP58876 126 aa6□□□□□ -1.45
CTSA-215ENST00000607187 HIST1H2BCP62807 126 aa6□□□□□ -1.45
CTSA-215ENST00000607187 HIST2H2BEQ16778 126 aa6□□□□□ -1.45
CTSA-215ENST00000607187 HIST2H2BFQ5QNW6 126 aaPredicted RBP6□□□□□ -1.45
CTSA-215ENST00000607187 HIST1H2BHQ93079 126 aa6□□□□□ -1.45
CTSA-215ENST00000607187 HIST1H2BNQ99877 126 aa6□□□□□ -1.45
CTSA-215ENST00000607187 HIST1H2BMQ99879 126 aa6□□□□□ -1.45
CTSA-215ENST00000607187 LINC00158P58513 81 aa5.99□□□□□ -1.45
CTSA-215ENST00000607187 Q8NDZ9 215 aa5.99□□□□□ -1.45
CTSA-215ENST00000607187 IGLV1-50A0A075B6I6 118 aa5.98□□□□□ -1.45
CTSA-215ENST00000607187 LEPROTO15243 131 aa5.98□□□□□ -1.45
CTSA-215ENST00000607187 DPM2O94777 84 aa5.98□□□□□ -1.45
CTSA-215ENST00000607187 SMIM13P0DJ93 91 aa5.98□□□□□ -1.45
CTSA-215ENST00000607187 RPL28P46779 137 aaKnown RBP5.98□□□□□ -1.45
CTSA-215ENST00000607187 MAP1LC3CQ9BXW4 147 aa5.98□□□□□ -1.45
CTSA-215ENST00000607187 NDUFA12Q9UI09 145 aa5.98□□□□□ -1.45
CTSA-215ENST00000607187 IGKV2-28A0A075B6P5 120 aa5.97□□□□□ -1.45
CTSA-215ENST00000607187 MYMXA0A1B0GTQ4 84 aa5.97□□□□□ -1.45
CTSA-215ENST00000607187 LINC00587B1AMM8 73 aa5.97□□□□□ -1.45
CTSA-215ENST00000607187 IGKV2D-28P01615 120 aa5.97□□□□□ -1.45
CTSA-215ENST00000607187 IGKCP01834 107 aa5.97□□□□□ -1.45
CTSA-215ENST00000607187 TSPEAR-AS2P59090 65 aa5.97□□□□□ -1.45
CTSA-215ENST00000607187 MEIG1Q5JSS6 88 aa5.97□□□□□ -1.45
CTSA-215ENST00000607187 KRTAP13-1Q8IUC0 172 aa5.97□□□□□ -1.45
CTSA-215ENST00000607187 PLEKHB2Q96CS7 222 aa5.97□□□□□ -1.45
CTSA-215ENST00000607187 PMCHL2Q9BQD1 86 aa5.97□□□□□ -1.45
CTSA-215ENST00000607187 HERVK_113P61574 105 aa5.96□□□□□ -1.46
CTSA-215ENST00000607187 SYS1-DBNDD2H3BUS1 97 aa5.95□□□□□ -1.46
CTSA-215ENST00000607187 J3QQQ9 107 aa5.95□□□□□ -1.46
CTSA-215ENST00000607187 MIR7-3HGQ8N6C7 128 aa5.95□□□□□ -1.46
CTSA-215ENST00000607187 TMEM238C9JI98 176 aa5.94□□□□□ -1.46
CTSA-215ENST00000607187 RPL13AP40429 203 aaKnown RBP5.94□□□□□ -1.46
CTSA-215ENST00000607187 NMUP48645 174 aa5.94□□□□□ -1.46
CTSA-215ENST00000607187 UBE2AP49459 152 aa5.94□□□□□ -1.46
CTSA-215ENST00000607187 COA6Q5JTJ3 125 aaKnown RBP5.94□□□□□ -1.46
CTSA-215ENST00000607187 BOD1L2Q8IYS8 172 aa5.94□□□□□ -1.46
CTSA-215ENST00000607187 TMEM126AQ9H061 195 aa5.94□□□□□ -1.46
CTSA-215ENST00000607187 IGLV9-49A0A0B4J1Y8 123 aa5.93□□□□□ -1.46
CTSA-215ENST00000607187 M0R378 163 aa5.93□□□□□ -1.46
CTSA-215ENST00000607187 LGALS3P17931 250 aaKnown RBP5.93□□□□□ -1.46
CTSA-215ENST00000607187 IGKV2D-26A0A0A0MRZ7 120 aa5.92□□□□□ -1.46
CTSA-215ENST00000607187 LOC107984156A0A0G2JMH3 177 aa5.92□□□□□ -1.46
CTSA-215ENST00000607187 E9PLD3 99 aa5.92□□□□□ -1.46
CTSA-215ENST00000607187 LINC01545Q5VT33 79 aa5.92□□□□□ -1.46
CTSA-215ENST00000607187 ARL17AQ8IVW1 177 aa5.92□□□□□ -1.46
CTSA-215ENST00000607187 LRP2P98164 4655 aa5.92□□□□□ -1.46
CTSA-215ENST00000607187 A0A087X002 238 aa5.91□□□□□ -1.46
CTSA-215ENST00000607187 PRLHP81277 87 aa5.91□□□□□ -1.46
CTSA-215ENST00000607187 FAM19A1Q7Z5A9 133 aa5.91□□□□□ -1.46
CTSA-215ENST00000607187 DAND5Q8N907 189 aa5.91□□□□□ -1.46
CTSA-215ENST00000607187 NCR3O14931 201 aa5.9□□□□□ -1.46
CTSA-215ENST00000607187 C3orf79P0CE67 100 aa5.9□□□□□ -1.46
CTSA-215ENST00000607187 A0A0J9YXY3 114 aa5.89□□□□□ -1.47
CTSA-215ENST00000607187 CRYGAP11844 174 aa5.89□□□□□ -1.47
CTSA-215ENST00000607187 KCNQ1DNQ9H478 68 aa5.89□□□□□ -1.47
CTSA-215ENST00000607187 TRBV10-3A0A0K0K1G6 114 aa5.88□□□□□ -1.47
CTSA-215ENST00000607187 SPRR1AP35321 89 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms