RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 KRTAP13-1Q8IUC0 172 aa14.27□□□□□ -0.13
SNX5-219ENST00000606602 IGKV2-28A0A075B6P5 120 aa14.25□□□□□ -0.13
SNX5-219ENST00000606602 IGKV2D-28P01615 120 aa14.25□□□□□ -0.13
SNX5-219ENST00000606602 PFN2P35080 140 aa14.25□□□□□ -0.13
SNX5-219ENST00000606602 NDUFA6P56556 154 aa14.25□□□□□ -0.13
SNX5-219ENST00000606602 KRTAP13-2Q52LG2 175 aa14.24□□□□□ -0.13
SNX5-219ENST00000606602 IFI27L1Q96BM0 104 aa14.24□□□□□ -0.13
SNX5-219ENST00000606602 IGLC3P0DOY3 106 aa14.23□□□□□ -0.13
SNX5-219ENST00000606602 A0A0U1RQV1 116 aa14.21□□□□□ -0.13
SNX5-219ENST00000606602 FAM229BQ4G0N7 80 aa14.21□□□□□ -0.13
SNX5-219ENST00000606602 IGLV5-39A0A0G2JS06 123 aa14.2□□□□□ -0.14
SNX5-219ENST00000606602 LEPROTL1O95214 131 aa14.2□□□□□ -0.14
SNX5-219ENST00000606602 TRAV12-1A0A0B4J245 112 aa14.19□□□□□ -0.14
SNX5-219ENST00000606602 PRLHP81277 87 aa14.18□□□□□ -0.14
SNX5-219ENST00000606602 SND1-IT1Q9HBX3 110 aa14.18□□□□□ -0.14
SNX5-219ENST00000606602 VPREB1P12018 145 aa14.17□□□□□ -0.14
SNX5-219ENST00000606602 FAM19A1Q7Z5A9 133 aa14.17□□□□□ -0.14
SNX5-219ENST00000606602 LINC00304Q8N9R0 145 aa14.17□□□□□ -0.14
SNX5-219ENST00000606602 RETNLBQ9BQ08 111 aa14.17□□□□□ -0.14
SNX5-219ENST00000606602 ERG28Q9UKR5 140 aa14.17□□□□□ -0.14
SNX5-219ENST00000606602 CHTOPQ9Y3Y2 248 aaKnown RBP14.17□□□□□ -0.14
SNX5-219ENST00000606602 IGKV2D-26A0A0A0MRZ7 120 aa14.16□□□□□ -0.14
SNX5-219ENST00000606602 ZNF22P17026 224 aaPredicted RBP14.16□□□□□ -0.14
SNX5-219ENST00000606602 TMEM126AQ9H061 195 aa14.16□□□□□ -0.14
SNX5-219ENST00000606602 C11orf86A6NJI1 115 aa14.15□□□□□ -0.14
SNX5-219ENST00000606602 TMEM238C9JI98 176 aa14.15□□□□□ -0.14
SNX5-219ENST00000606602 FABP4P15090 132 aa14.15□□□□□ -0.14
SNX5-219ENST00000606602 RPL24P83731 157 aaKnown RBP14.15□□□□□ -0.14
SNX5-219ENST00000606602 COA6Q5JTJ3 125 aaKnown RBP14.15□□□□□ -0.14
SNX5-219ENST00000606602 HSPB8Q9UJY1 196 aa14.15□□□□□ -0.14
SNX5-219ENST00000606602 ZNF625Q96I27 306 aaPredicted RBP14.14□□□□□ -0.15
SNX5-219ENST00000606602 COX17Q14061 63 aa14.13□□□□□ -0.15
SNX5-219ENST00000606602 M0R378 163 aa14.1□□□□□ -0.15
SNX5-219ENST00000606602 H0Y8G0 127 aa14.09□□□□□ -0.15
SNX5-219ENST00000606602 TMEM170BQ5T4T1 132 aa14.09□□□□□ -0.15
SNX5-219ENST00000606602 Q8NDZ9 215 aa14.09□□□□□ -0.15
SNX5-219ENST00000606602 PLEKHB2Q96CS7 222 aa14.07□□□□□ -0.16
SNX5-219ENST00000606602 SFTA2Q6UW10 78 aa14.06□□□□□ -0.16
SNX5-219ENST00000606602 MAP1LC3CQ9BXW4 147 aa14.05□□□□□ -0.16
SNX5-219ENST00000606602 CDIP1Q9H305 208 aa14.05□□□□□ -0.16
SNX5-219ENST00000606602 IGLV7-46A0A075B6I9 117 aa14.04□□□□□ -0.16
SNX5-219ENST00000606602 TMEM223A0PJW6 202 aa14.04□□□□□ -0.16
SNX5-219ENST00000606602 HIGD2AQ9BW72 106 aa14.04□□□□□ -0.16
SNX5-219ENST00000606602 LINC00158P58513 81 aa14.03□□□□□ -0.16
SNX5-219ENST00000606602 C3orf22Q8N5N4 141 aa14.03□□□□□ -0.16
SNX5-219ENST00000606602 FAT4Q6V0I7 4981 aa14.03□□□□□ -0.16
SNX5-219ENST00000606602 CTAG1AP78358 180 aa14.02□□□□□ -0.17
SNX5-219ENST00000606602 TPRXLQ17RH7 258 aa14.02□□□□□ -0.17
SNX5-219ENST00000606602 PMCHL2Q9BQD1 86 aa14.01□□□□□ -0.17
SNX5-219ENST00000606602 SYS1-DBNDD2H3BUS1 97 aa14□□□□□ -0.17
SNX5-219ENST00000606602 PLNP26678 52 aa14□□□□□ -0.17
SNX5-219ENST00000606602 A0A0U1RRA0 63 aa13.99□□□□□ -0.17
SNX5-219ENST00000606602 DPM2O94777 84 aa13.99□□□□□ -0.17
SNX5-219ENST00000606602 IGKCP01834 107 aa13.97□□□□□ -0.17
SNX5-219ENST00000606602 MUC17Q685J3 4493 aa13.97□□□□□ -0.17
SNX5-219ENST00000606602 SPRR4Q96PI1 79 aa13.96□□□□□ -0.17
SNX5-219ENST00000606602 C3orf79P0CE67 100 aa13.95□□□□□ -0.18
SNX5-219ENST00000606602 PET117Q6UWS5 81 aa13.95□□□□□ -0.18
SNX5-219ENST00000606602 LCE2AQ5TA79 106 aaPredicted RBP13.94□□□□□ -0.18
SNX5-219ENST00000606602 LINC01545Q5VT33 79 aa13.94□□□□□ -0.18
SNX5-219ENST00000606602 SPAG11AQ6PDA7 123 aa13.94□□□□□ -0.18
SNX5-219ENST00000606602 PPDPFQ9H3Y8 114 aa13.94□□□□□ -0.18
SNX5-219ENST00000606602 HIST3H2BBQ8N257 126 aa13.93□□□□□ -0.18
SNX5-219ENST00000606602 KRTAP9-2Q9BYQ4 174 aa13.93□□□□□ -0.18
SNX5-219ENST00000606602 SMIM13P0DJ93 91 aa13.92□□□□□ -0.18
SNX5-219ENST00000606602 ZNF706Q9Y5V0 76 aaPredicted RBP13.92□□□□□ -0.18
SNX5-219ENST00000606602 KRTDAPP60985 99 aa13.91□□□□□ -0.18
SNX5-219ENST00000606602 BOD1L2Q8IYS8 172 aa13.91□□□□□ -0.18
SNX5-219ENST00000606602 S100A6P06703 90 aa13.9□□□□□ -0.18
SNX5-219ENST00000606602 C4orf48Q5BLP8 95 aa13.9□□□□□ -0.18
SNX5-219ENST00000606602 PRYO14603 147 aa13.89□□□□□ -0.19
SNX5-219ENST00000606602 MEIG1Q5JSS6 88 aa13.89□□□□□ -0.19
SNX5-219ENST00000606602 NCR3O14931 201 aa13.88□□□□□ -0.19
SNX5-219ENST00000606602 LEPROTO15243 131 aa13.88□□□□□ -0.19
SNX5-219ENST00000606602 TSPEAR-AS2P59090 65 aa13.88□□□□□ -0.19
SNX5-219ENST00000606602 HIST1H2BLQ99880 126 aa13.88□□□□□ -0.19
SNX5-219ENST00000606602 HERVK_113P61574 105 aa13.87□□□□□ -0.19
SNX5-219ENST00000606602 MIR7-3HGQ8N6C7 128 aa13.87□□□□□ -0.19
SNX5-219ENST00000606602 LINC00337Q8N6G1 96 aa13.86□□□□□ -0.19
SNX5-219ENST00000606602 DAND5Q8N907 189 aa13.86□□□□□ -0.19
SNX5-219ENST00000606602 S100A2P29034 98 aa13.85□□□□□ -0.19
SNX5-219ENST00000606602 Q8NBF4 154 aa13.85□□□□□ -0.19
SNX5-219ENST00000606602 SMCR5Q8TEV8 140 aa13.85□□□□□ -0.19
SNX5-219ENST00000606602 KCNQ1DNQ9H478 68 aa13.85□□□□□ -0.19
SNX5-219ENST00000606602 NDUFA12Q9UI09 145 aa13.85□□□□□ -0.19
SNX5-219ENST00000606602 ETDCA0A1B0GVM5 59 aa13.84□□□□□ -0.19
SNX5-219ENST00000606602 SPRR1AP35321 89 aa13.84□□□□□ -0.19
SNX5-219ENST00000606602 SNRPEP62304 92 aaKnown RBP13.84□□□□□ -0.19
SNX5-219ENST00000606602 HERV-K104P63124 156 aa13.84□□□□□ -0.19
SNX5-219ENST00000606602 FP248Q71RG6 208 aaPredicted RBP13.84□□□□□ -0.19
SNX5-219ENST00000606602 J3QQQ9 107 aa13.83□□□□□ -0.2
SNX5-219ENST00000606602 C5orf52A6NGY3 159 aa13.82□□□□□ -0.2
SNX5-219ENST00000606602 E9PLD3 99 aa13.82□□□□□ -0.2
SNX5-219ENST00000606602 MYMXA0A1B0GTQ4 84 aa13.81□□□□□ -0.2
SNX5-219ENST00000606602 C20orf202A1L168 122 aa13.81□□□□□ -0.2
SNX5-219ENST00000606602 LINC00587B1AMM8 73 aa13.81□□□□□ -0.2
SNX5-219ENST00000606602 TRBV10-3A0A0K0K1G6 114 aa13.8□□□□□ -0.2
SNX5-219ENST00000606602 KRTAP4-16G5E9R7 235 aaPredicted RBP13.8□□□□□ -0.2
SNX5-219ENST00000606602 LGALS3P17931 250 aaKnown RBP13.79□□□□□ -0.2
SNX5-219ENST00000606602 NMUP48645 174 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms