RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 PHF5AQ7RTV0 110 aaKnown RBP8.91□□□□□ -0.98
CTSA-211ENST00000606066 PLA2G2DQ9UNK4 145 aa8.91□□□□□ -0.98
CTSA-211ENST00000606066 LBHQ53QV2 105 aaPredicted RBP8.9□□□□□ -0.98
CTSA-211ENST00000606066 SND1-IT1Q9HBX3 110 aa8.9□□□□□ -0.98
CTSA-211ENST00000606066 LRP1Q07954 4544 aaKnown RBP8.9□□□□□ -0.98
CTSA-211ENST00000606066 A0A0U1RRA0 63 aa8.89□□□□□ -0.99
CTSA-211ENST00000606066 KRTAP29-1A8MX34 341 aaPredicted RBP8.89□□□□□ -0.99
CTSA-211ENST00000606066 SMIM13P0DJ93 91 aa8.89□□□□□ -0.99
CTSA-211ENST00000606066 SERTAD4-AS1Q5TG53 156 aa8.89□□□□□ -0.99
CTSA-211ENST00000606066 KRTAP7-1Q8IUC3 87 aa8.89□□□□□ -0.99
CTSA-211ENST00000606066 TP73-AS1Q9UF72 201 aa8.89□□□□□ -0.99
CTSA-211ENST00000606066 C22orf24Q9Y442 160 aa8.89□□□□□ -0.99
CTSA-211ENST00000606066 KRTAP10-4P60372 401 aaPredicted RBP8.88□□□□□ -0.99
CTSA-211ENST00000606066 UBE2BP63146 152 aa8.88□□□□□ -0.99
CTSA-211ENST00000606066 RPL24P83731 157 aaKnown RBP8.88□□□□□ -0.99
CTSA-211ENST00000606066 PRR3P79522 188 aaKnown RBP8.87□□□□□ -0.99
CTSA-211ENST00000606066 ATOH7Q8N100 152 aa8.87□□□□□ -0.99
CTSA-211ENST00000606066 NKAPP1Q8N9T2 125 aa8.87□□□□□ -0.99
CTSA-211ENST00000606066 MRPL55Q7Z7F7 128 aaKnown RBP8.86□□□□□ -0.99
CTSA-211ENST00000606066 MIR7-3HGQ8N6C7 128 aa8.86□□□□□ -0.99
CTSA-211ENST00000606066 FAT3Q8TDW7 4589 aa8.86□□□□□ -0.99
CTSA-211ENST00000606066 IGLV5-37A0A075B6J1 123 aa8.85□□□□□ -0.99
CTSA-211ENST00000606066 PSORS1C2Q9UIG4 136 aa8.85□□□□□ -0.99
CTSA-211ENST00000606066 IGKV2D-26A0A0A0MRZ7 120 aa8.84□□□□□ -0.99
CTSA-211ENST00000606066 A0A0J9YXY3 114 aa8.84□□□□□ -0.99
CTSA-211ENST00000606066 ZNF815PA8K554 130 aa8.84□□□□□ -0.99
CTSA-211ENST00000606066 HSBP1L1C9JCN9 74 aa8.84□□□□□ -0.99
CTSA-211ENST00000606066 SCGB1D1O95968 90 aa8.84□□□□□ -0.99
CTSA-211ENST00000606066 C1orf137Q5JT78 98 aa8.83□□□□□ -1
CTSA-211ENST00000606066 VPREB1P12018 145 aa8.82□□□□□ -1
CTSA-211ENST00000606066 ANKRD39Q53RE8 183 aa8.82□□□□□ -1
CTSA-211ENST00000606066 LINC00167Q96N53 147 aa8.82□□□□□ -1
CTSA-211ENST00000606066 MIEN1Q9BRT3 115 aa8.82□□□□□ -1
CTSA-211ENST00000606066 BOD1L2Q8IYS8 172 aa8.81□□□□□ -1
CTSA-211ENST00000606066 GAGE10A6NGK3 116 aa8.8□□□□□ -1
CTSA-211ENST00000606066 TIMM17BO60830 172 aa8.8□□□□□ -1
CTSA-211ENST00000606066 DAND5Q8N907 189 aa8.8□□□□□ -1
CTSA-211ENST00000606066 TMA7Q9Y2S6 64 aaKnown RBP8.8□□□□□ -1
CTSA-211ENST00000606066 LOC107984156A0A0G2JMH3 177 aa8.79□□□□□ -1
CTSA-211ENST00000606066 RPL37AP8A6NKH3 93 aa8.79□□□□□ -1
CTSA-211ENST00000606066 SPINK6Q6UWN8 80 aa8.79□□□□□ -1
CTSA-211ENST00000606066 SCGB1D4Q6XE38 83 aa8.79□□□□□ -1
CTSA-211ENST00000606066 KRTAP11-1Q8IUC1 163 aa8.79□□□□□ -1
CTSA-211ENST00000606066 ARL17AQ8IVW1 177 aa8.79□□□□□ -1
CTSA-211ENST00000606066 TTTY13Q9BZ97 58 aa8.79□□□□□ -1
CTSA-211ENST00000606066 M0R378 163 aa8.78□□□□□ -1
CTSA-211ENST00000606066 HNRNPA3P51991 378 aaKnown RBP8.78□□□□□ -1
CTSA-211ENST00000606066 IGLV7-43P04211 117 aa8.77□□□□□ -1.01
CTSA-211ENST00000606066 ADAMTSL4-AS1Q5T5F5 129 aa8.77□□□□□ -1.01
CTSA-211ENST00000606066 Q8NDZ9 215 aa8.77□□□□□ -1.01
CTSA-211ENST00000606066 IGLV1-50A0A075B6I6 118 aa8.76□□□□□ -1.01
CTSA-211ENST00000606066 TMEM238C9JI98 176 aa8.76□□□□□ -1.01
CTSA-211ENST00000606066 OXTP01178 125 aa8.76□□□□□ -1.01
CTSA-211ENST00000606066 SRSF9Q13242 221 aaKnown RBP eCLIP8.76□□□□□ -1.01
CTSA-211ENST00000606066 PCP2Q8IVA1 136 aa8.76□□□□□ -1.01
CTSA-211ENST00000606066 IGKV2-28A0A075B6P5 120 aa8.75□□□□□ -1.01
CTSA-211ENST00000606066 NDUFC2O95298 119 aa8.75□□□□□ -1.01
CTSA-211ENST00000606066 IGKV2D-28P01615 120 aa8.75□□□□□ -1.01
CTSA-211ENST00000606066 LITAFQ99732 161 aa8.75□□□□□ -1.01
CTSA-211ENST00000606066 NCR3O14931 201 aa8.74□□□□□ -1.01
CTSA-211ENST00000606066 BCE1O60756 84 aa8.74□□□□□ -1.01
CTSA-211ENST00000606066 NPC2P61916 151 aa8.74□□□□□ -1.01
CTSA-211ENST00000606066 JOSD1Q15040 202 aaPredicted RBP8.74□□□□□ -1.01
CTSA-211ENST00000606066 COPS9Q8WXC6 57 aa8.74□□□□□ -1.01
CTSA-211ENST00000606066 TRBV10-2A0A0K0K1G8 114 aa8.73□□□□□ -1.01
CTSA-211ENST00000606066 S100A12P80511 92 aa8.73□□□□□ -1.01
CTSA-211ENST00000606066 Q6ZVH6 145 aa8.73□□□□□ -1.01
CTSA-211ENST00000606066 LINC00308Q8TCZ7 52 aa8.73□□□□□ -1.01
CTSA-211ENST00000606066 SPANXB1Q9NS25 103 aaPredicted RBP8.73□□□□□ -1.01
CTSA-211ENST00000606066 SOSTDC1Q6X4U4 206 aa8.72□□□□□ -1.01
CTSA-211ENST00000606066 DIRC1Q969H9 104 aa8.72□□□□□ -1.01
CTSA-211ENST00000606066 SPANXDQ9BXN6 97 aa8.72□□□□□ -1.01
CTSA-211ENST00000606066 SPANXCQ9NY87 97 aa8.72□□□□□ -1.01
CTSA-211ENST00000606066 ZNF861PO60384 105 aa8.71□□□□□ -1.02
CTSA-211ENST00000606066 RPL28P46779 137 aaKnown RBP8.71□□□□□ -1.02
CTSA-211ENST00000606066 REG3GQ6UW15 175 aa8.71□□□□□ -1.02
CTSA-211ENST00000606066 IFITM1P13164 125 aa8.7□□□□□ -1.02
CTSA-211ENST00000606066 S100A7L2Q5SY68 101 aa8.7□□□□□ -1.02
CTSA-211ENST00000606066 VAMP8Q9BV40 100 aa8.7□□□□□ -1.02
CTSA-211ENST00000606066 TMEM126AQ9H061 195 aa8.7□□□□□ -1.02
CTSA-211ENST00000606066 PKHD1L1Q86WI1 4243 aa8.7□□□□□ -1.02
CTSA-211ENST00000606066 EIF4EBP3O60516 100 aaPredicted RBP8.69□□□□□ -1.02
CTSA-211ENST00000606066 UBE2AP49459 152 aa8.69□□□□□ -1.02
CTSA-211ENST00000606066 PPDPFQ9H3Y8 114 aa8.69□□□□□ -1.02
CTSA-211ENST00000606066 H0Y9J4 135 aa8.68□□□□□ -1.02
CTSA-211ENST00000606066 PRYO14603 147 aa8.68□□□□□ -1.02
CTSA-211ENST00000606066 COX8AP10176 69 aa8.68□□□□□ -1.02
CTSA-211ENST00000606066 DDTP30046 118 aa8.68□□□□□ -1.02
CTSA-211ENST00000606066 LINC00518Q8N0U6 118 aa8.68□□□□□ -1.02
CTSA-211ENST00000606066 KCNQ1DNQ9H478 68 aa8.68□□□□□ -1.02
CTSA-211ENST00000606066 PAM16Q9Y3D7 125 aa8.68□□□□□ -1.02
CTSA-211ENST00000606066 TRBV10-3A0A0K0K1G6 114 aa8.67□□□□□ -1.02
CTSA-211ENST00000606066 SPATA45Q537H7 98 aa8.67□□□□□ -1.02
CTSA-211ENST00000606066 FAM19A1Q7Z5A9 133 aa8.67□□□□□ -1.02
CTSA-211ENST00000606066 CBY1Q9Y3M2 126 aa8.67□□□□□ -1.02
CTSA-211ENST00000606066 DLEU1O43261 78 aa8.66□□□□□ -1.02
CTSA-211ENST00000606066 IGLV6-57P01721 117 aa8.65□□□□□ -1.02
CTSA-211ENST00000606066 PYY3Q5JQD4 70 aa8.65□□□□□ -1.02
CTSA-211ENST00000606066 MUSTN1Q8IVN3 82 aa8.65□□□□□ -1.02
CTSA-211ENST00000606066 RNF213Q63HN8 5207 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms