RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ANKRD17O75179 2603 aaKnown RBP3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 PDE6GP18545 87 aa3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 C9orf47Q6ZRZ4 202 aa3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 S4R3C0 116 aa3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 SETXQ7Z333 2677 aaKnown RBP3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 IGHV3-73A0A0B4J1V6 119 aa3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 CASC2Q6XLA1 102 aa3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 SMIM11BQ8TCY0 68 aa3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 ZCCHC13Q8WW36 166 aaKnown RBP3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 RPL36ALQ969Q0 106 aaKnown RBP3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 TTTY12Q9BZ98 90 aa3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 MINOS1-NBL1R4GNA1 71 aa3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 IGHV3-66A0A0C4DH42 116 aa3.29□□□□□ -1.88
SPTBN1-206ENST00000602898 MAST4O15021 2626 aa3.29□□□□□ -1.88
SPTBN1-206ENST00000602898 FLNBO75369 2602 aaKnown RBP3.29□□□□□ -1.88
SPTBN1-206ENST00000602898 Q6ZTI0 123 aa3.29□□□□□ -1.88
SPTBN1-206ENST00000602898 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
SPTBN1-206ENST00000602898 A8MUU9 505 aa3.28□□□□□ -1.88
SPTBN1-206ENST00000602898 NDUFB1O75438 58 aa3.28□□□□□ -1.88
SPTBN1-206ENST00000602898 RPL36AP83881 106 aaKnown RBP3.28□□□□□ -1.88
SPTBN1-206ENST00000602898 PRR9Q5T870 116 aa3.28□□□□□ -1.88
SPTBN1-206ENST00000602898 Q9BRP9 147 aa3.28□□□□□ -1.88
SPTBN1-206ENST00000602898 PLCE1Q9P212 2302 aa3.28□□□□□ -1.88
SPTBN1-206ENST00000602898 LINC00315P59091 139 aa3.28□□□□□ -1.88
SPTBN1-206ENST00000602898 TENM4Q6N022 2769 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 A6NDX4 124 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 IGLV1-44P01699 117 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 SMIM29Q86T20 159 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 Q8N9W7 124 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 LENEPQ9Y5L5 61 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 CELSR3Q9NYQ7 3312 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 ZZEF1O43149 2961 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 HELZ2Q9BYK8 2649 aaKnown RBP3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 A0A1B0GW54 56 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 P0C880 135 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 XAGE1AQ9HD64 81 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 KLK9Q9UKQ9 250 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 ASPMQ8IZT6 3477 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 AKAP13Q12802 2813 aa3.27□□□□□ -1.89
SPTBN1-206ENST00000602898 IGHV3OR16-8A0A075B7F1 116 aa3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 NTM-AS1Q6ZSK4 140 aa3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 DSPP15924 2871 aaKnown RBP3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 IGKV2-28A0A075B6P5 120 aa3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 IGKV2D-28P01615 120 aa3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 IGHV1-8P0DP01 117 aa3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 FAM74A4Q5TZK3 123 aa3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 CHCHD7Q9BUK0 85 aa3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 U3KQA8 63 aa3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 ITPR1Q14643 2758 aa3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 CACNA1EQ15878 2313 aa3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 IGLV11-55A0A075B6I3 123 aa3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 IGHV1-3A0A0C4DH29 117 aa3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 CAMK2N1Q7Z7J9 78 aa3.26□□□□□ -1.89
SPTBN1-206ENST00000602898 H3BQ85 93 aa3.25□□□□□ -1.89
SPTBN1-206ENST00000602898 IGHV1-46P01743 117 aa3.25□□□□□ -1.89
SPTBN1-206ENST00000602898 RNASE3P12724 160 aaKnown RBP3.25□□□□□ -1.89
SPTBN1-206ENST00000602898 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
SPTBN1-206ENST00000602898 DEFB114Q30KQ6 69 aa3.25□□□□□ -1.89
SPTBN1-206ENST00000602898 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
SPTBN1-206ENST00000602898 CLPSL1A2RUU4 121 aa3.25□□□□□ -1.89
SPTBN1-206ENST00000602898 IGKV4-1P06312 121 aa3.25□□□□□ -1.89
SPTBN1-206ENST00000602898 LINC00208Q96KT6 92 aa3.25□□□□□ -1.89
SPTBN1-206ENST00000602898 ACACAQ13085 2346 aa3.24□□□□□ -1.89
SPTBN1-206ENST00000602898 URB1O60287 2271 aaKnown RBP3.24□□□□□ -1.89
SPTBN1-206ENST00000602898 SPANXA2-OT1Q8N9U9 137 aa3.24□□□□□ -1.89
SPTBN1-206ENST00000602898 IGLV1-47P01700 117 aa3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 PRB3Q04118 309 aaPredicted RBP3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 C15orf56Q8N910 161 aa3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 RNF5Q99942 180 aa3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 APC2O95996 2303 aa3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 NAV2Q8IVL1 2488 aa3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 DMXL2Q8TDJ6 3036 aa3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 GIG44P09565 113 aaPredicted RBP3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 CDKN2A-AS1Q9UH64 79 aa3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 MGAQ8IWI9 3026 aa3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 AHCTF1Q8WYP5 2266 aa3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 M0QY20 66 aa3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 HIGD2BQ4VC39 106 aa3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 PLAC8Q9NZF1 115 aa3.23□□□□□ -1.89
SPTBN1-206ENST00000602898 Q8N377 158 aa3.22□□□□□ -1.89
SPTBN1-206ENST00000602898 C20orf166-AS1Q96NR2 134 aa3.22□□□□□ -1.89
SPTBN1-206ENST00000602898 FBN2P35556 2912 aa3.22□□□□□ -1.89
SPTBN1-206ENST00000602898 PTPRQQ9UMZ3 2332 aa3.22□□□□□ -1.89
SPTBN1-206ENST00000602898 IGLV1-50A0A075B6I6 118 aa3.22□□□□□ -1.89
SPTBN1-206ENST00000602898 DNAH10OSP0CZ25 163 aa3.22□□□□□ -1.89
SPTBN1-206ENST00000602898 LINC01558Q9Y6Z2 57 aa3.22□□□□□ -1.89
SPTBN1-206ENST00000602898 IGLV4-60A0A075B6I1 120 aa3.21□□□□□ -1.9
SPTBN1-206ENST00000602898 M0R2N4 97 aa3.21□□□□□ -1.9
SPTBN1-206ENST00000602898 SPENQ96T58 3664 aaKnown RBP3.21□□□□□ -1.9
SPTBN1-206ENST00000602898 KALRNO60229 2985 aa3.21□□□□□ -1.9
SPTBN1-206ENST00000602898 NDUFA4O00483 81 aa3.21□□□□□ -1.9
SPTBN1-206ENST00000602898 RTL8CO15255 209 aa3.21□□□□□ -1.9
SPTBN1-206ENST00000602898 IGHV3-53P01767 116 aa3.21□□□□□ -1.9
SPTBN1-206ENST00000602898 DEFB113Q30KQ7 82 aa3.21□□□□□ -1.9
SPTBN1-206ENST00000602898 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.2□□□□□ -1.9
SPTBN1-206ENST00000602898 TRBV6-4A0A1B0GX49 114 aa3.2□□□□□ -1.9
SPTBN1-206ENST00000602898 DEFB1P60022 68 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms