RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 LYPD5Q6UWN5 251 aa7.58□□□□□ -1.2
SCN1B-205ENST00000602150 TGP01266 2768 aa7.58□□□□□ -1.2
SCN1B-205ENST00000602150 NDUFC2-KCTD14E9PQ53 114 aa7.58□□□□□ -1.2
SCN1B-205ENST00000602150 CCKP06307 115 aa7.58□□□□□ -1.2
SCN1B-205ENST00000602150 COL7A1Q02388 2944 aa7.58□□□□□ -1.2
SCN1B-205ENST00000602150 EPM2AB3EWF7 344 aa7.57□□□□□ -1.2
SCN1B-205ENST00000602150 HRCT1Q6UXD1 115 aa7.57□□□□□ -1.2
SCN1B-205ENST00000602150 LECT2O14960 151 aa7.57□□□□□ -1.2
SCN1B-205ENST00000602150 IL17DQ8TAD2 202 aa7.56□□□□□ -1.2
SCN1B-205ENST00000602150 C11orf68Q9H3H3 251 aaKnown RBP7.56□□□□□ -1.2
SCN1B-205ENST00000602150 NDUFC2O95298 119 aa7.56□□□□□ -1.2
SCN1B-205ENST00000602150 CCL18P55774 89 aa7.56□□□□□ -1.2
SCN1B-205ENST00000602150 PAX4O43316 350 aa7.55□□□□□ -1.2
SCN1B-205ENST00000602150 COX7B2Q8TF08 81 aa7.55□□□□□ -1.2
SCN1B-205ENST00000602150 LINC00167Q96N53 147 aa7.55□□□□□ -1.2
SCN1B-205ENST00000602150 SLPIP03973 132 aa7.55□□□□□ -1.2
SCN1B-205ENST00000602150 A0A0J9YWU9 116 aa7.54□□□□□ -1.2
SCN1B-205ENST00000602150 NANOS2P60321 138 aaKnown RBP7.54□□□□□ -1.2
SCN1B-205ENST00000602150 IGLV10-54A0A075B6I4 117 aa7.54□□□□□ -1.2
SCN1B-205ENST00000602150 ATP5EP2Q5VTU8 51 aa7.54□□□□□ -1.2
SCN1B-205ENST00000602150 Q8NAQ8 132 aa7.54□□□□□ -1.2
SCN1B-205ENST00000602150 Q6ZTC4 211 aa7.53□□□□□ -1.2
SCN1B-205ENST00000602150 GHRHP01286 108 aa7.53□□□□□ -1.2
SCN1B-205ENST00000602150 LINC00158P58513 81 aa7.53□□□□□ -1.2
SCN1B-205ENST00000602150 ORMDL1Q9P0S3 153 aa7.53□□□□□ -1.2
SCN1B-205ENST00000602150 IGLV4-60A0A075B6I1 120 aa7.53□□□□□ -1.2
SCN1B-205ENST00000602150 TRBV10-1A0A0K0K1A3 114 aa7.53□□□□□ -1.2
SCN1B-205ENST00000602150 TRBV10-3A0A0K0K1G6 114 aa7.52□□□□□ -1.21
SCN1B-205ENST00000602150 IBA57-AS1B1ANH7 110 aa7.52□□□□□ -1.21
SCN1B-205ENST00000602150 S100A7L2Q5SY68 101 aa7.52□□□□□ -1.21
SCN1B-205ENST00000602150 FAM19A1Q7Z5A9 133 aa7.52□□□□□ -1.21
SCN1B-205ENST00000602150 TMEM243Q9BU79 118 aa7.51□□□□□ -1.21
SCN1B-205ENST00000602150 TRAV23DV6A0A075B6W5 121 aa7.51□□□□□ -1.21
SCN1B-205ENST00000602150 TRBV6-4A0A1B0GX49 114 aa7.51□□□□□ -1.21
SCN1B-205ENST00000602150 JMJD7-PLA2G4BH0Y9G9 81 aa7.5□□□□□ -1.21
SCN1B-205ENST00000602150 SPART-AS1P0CW21 52 aa7.5□□□□□ -1.21
SCN1B-205ENST00000602150 IGHV3OR16-9A0A0B4J2B5 98 aa7.5□□□□□ -1.21
SCN1B-205ENST00000602150 XCL1P47992 114 aa7.5□□□□□ -1.21
SCN1B-205ENST00000602150 H7BZZ5 65 aa7.5□□□□□ -1.21
SCN1B-205ENST00000602150 ENHOQ6UWT2 76 aa7.5□□□□□ -1.21
SCN1B-205ENST00000602150 PRO0255Q9UI72 69 aa7.49□□□□□ -1.21
SCN1B-205ENST00000602150 K7EIL1 84 aa7.49□□□□□ -1.21
SCN1B-205ENST00000602150 PFN2P35080 140 aa7.48□□□□□ -1.21
SCN1B-205ENST00000602150 C20orf197Q8N268 126 aa7.48□□□□□ -1.21
SCN1B-205ENST00000602150 BCE1O60756 84 aa7.48□□□□□ -1.21
SCN1B-205ENST00000602150 Q8N814 137 aa7.48□□□□□ -1.21
SCN1B-205ENST00000602150 FAM236DA0A1B0GTK5 79 aa7.47□□□□□ -1.21
SCN1B-205ENST00000602150 TMEM256-PLSCR3K7ERE1 68 aa7.47□□□□□ -1.21
SCN1B-205ENST00000602150 FAM236CP0DP71 79 aa7.47□□□□□ -1.21
SCN1B-205ENST00000602150 A0A087WZ39 114 aa7.47□□□□□ -1.21
SCN1B-205ENST00000602150 TRBV6-8A0A0A6YYG3 113 aa7.47□□□□□ -1.21
SCN1B-205ENST00000602150 MIFP14174 115 aa7.47□□□□□ -1.21
SCN1B-205ENST00000602150 SERP1Q9Y6X1 66 aa7.47□□□□□ -1.21
SCN1B-205ENST00000602150 ANGP03950 147 aaKnown RBP7.46□□□□□ -1.21
SCN1B-205ENST00000602150 LYRM9A8MSI8 78 aa7.46□□□□□ -1.22
SCN1B-205ENST00000602150 KLKP1Q107X0 134 aa7.46□□□□□ -1.22
SCN1B-205ENST00000602150 LINC00336Q6ZUF6 198 aa7.46□□□□□ -1.22
SCN1B-205ENST00000602150 MEGF8Q7Z7M0 2845 aa7.45□□□□□ -1.22
SCN1B-205ENST00000602150 CSMD3Q7Z407 3707 aa7.45□□□□□ -1.22
SCN1B-205ENST00000602150 PRO0628Q9UI54 55 aa7.45□□□□□ -1.22
SCN1B-205ENST00000602150 LYSTQ99698 3801 aa7.45□□□□□ -1.22
SCN1B-205ENST00000602150 TRAV7A0A075B6U4 112 aa7.44□□□□□ -1.22
SCN1B-205ENST00000602150 LINC00269Q8N2A0 174 aa7.44□□□□□ -1.22
SCN1B-205ENST00000602150 EGFEM1PQ0D2K5 195 aa7.44□□□□□ -1.22
SCN1B-205ENST00000602150 UBL5Q9BZL1 73 aa7.44□□□□□ -1.22
SCN1B-205ENST00000602150 C11orf45Q8TAV5 145 aa7.44□□□□□ -1.22
SCN1B-205ENST00000602150 C6orf226Q5I0X4 101 aa7.43□□□□□ -1.22
SCN1B-205ENST00000602150 KPRPQ5T749 579 aaPredicted RBP7.43□□□□□ -1.22
SCN1B-205ENST00000602150 KLK12Q9UKR0 248 aa7.43□□□□□ -1.22
SCN1B-205ENST00000602150 HUWE1Q7Z6Z7 4374 aaKnown RBP7.43□□□□□ -1.22
SCN1B-205ENST00000602150 DEFB131BA0A096LNP1 70 aa7.43□□□□□ -1.22
SCN1B-205ENST00000602150 FP248Q71RG6 208 aaPredicted RBP7.42□□□□□ -1.22
SCN1B-205ENST00000602150 Q6ZQT0 140 aa7.42□□□□□ -1.22
SCN1B-205ENST00000602150 WFDC10BQ8IUB3 73 aa7.42□□□□□ -1.22
SCN1B-205ENST00000602150 PRR3P79522 188 aaKnown RBP7.41□□□□□ -1.22
SCN1B-205ENST00000602150 LOC110117498A0A087WWA1 95 aa7.4□□□□□ -1.22
SCN1B-205ENST00000602150 LINC01547P58512 204 aaPredicted RBP7.4□□□□□ -1.22
SCN1B-205ENST00000602150 DNAH3Q8TD57 4116 aa7.4□□□□□ -1.23
SCN1B-205ENST00000602150 TRAV10A0A0B4J240 114 aa7.4□□□□□ -1.23
SCN1B-205ENST00000602150 LINC00612Q8N6U2 182 aa7.4□□□□□ -1.23
SCN1B-205ENST00000602150 PRKDCP78527 4128 aaKnown RBP7.39□□□□□ -1.23
SCN1B-205ENST00000602150 LINC00959A0A1B0GUT2 108 aa7.39□□□□□ -1.23
SCN1B-205ENST00000602150 M0R2N4 97 aa7.39□□□□□ -1.23
SCN1B-205ENST00000602150 SMIM26A0A096LP01 95 aa7.38□□□□□ -1.23
SCN1B-205ENST00000602150 Q8IZM0 81 aa7.38□□□□□ -1.23
SCN1B-205ENST00000602150 C1orf43Q9BWL3 253 aa7.38□□□□□ -1.23
SCN1B-205ENST00000602150 HAMPP81172 84 aa7.37□□□□□ -1.23
SCN1B-205ENST00000602150 RBM3P98179 157 aaKnown RBP7.37□□□□□ -1.23
SCN1B-205ENST00000602150 RMI2Q96E14 147 aa7.37□□□□□ -1.23
SCN1B-205ENST00000602150 LINC00575Q6W349 94 aa7.37□□□□□ -1.23
SCN1B-205ENST00000602150 C6orf223Q8N319 242 aa7.37□□□□□ -1.23
SCN1B-205ENST00000602150 CXCL6P80162 114 aa7.36□□□□□ -1.23
SCN1B-205ENST00000602150 Q6ZVQ6 151 aa7.36□□□□□ -1.23
SCN1B-205ENST00000602150 SNURFQ9Y675 71 aa7.36□□□□□ -1.23
SCN1B-205ENST00000602150 Q8NDZ9 215 aa7.36□□□□□ -1.23
SCN1B-205ENST00000602150 F8WEM9 126 aa7.35□□□□□ -1.23
SCN1B-205ENST00000602150 ZNF561-AS1K7EIQ3 104 aa7.35□□□□□ -1.23
SCN1B-205ENST00000602150 REG3AQ06141 175 aa7.35□□□□□ -1.23
SCN1B-205ENST00000602150 ESRGQ1W209 222 aa7.35□□□□□ -1.23
SCN1B-205ENST00000602150 COX17Q14061 63 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms