RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 EPM2AB3EWF7 344 aa9.25□□□□□ -0.93
USE1-210ENST00000601662 IFITM1P13164 125 aa9.25□□□□□ -0.93
USE1-210ENST00000601662 GAGE2BQ13066 116 aa9.25□□□□□ -0.93
USE1-210ENST00000601662 GAGE2EQ4V326 116 aa9.25□□□□□ -0.93
USE1-210ENST00000601662 ADAMTSL4-AS1Q5T5F5 129 aa9.25□□□□□ -0.93
USE1-210ENST00000601662 Q6ZRP5 223 aa9.25□□□□□ -0.93
USE1-210ENST00000601662 SPANXDQ9BXN6 97 aa9.25□□□□□ -0.93
USE1-210ENST00000601662 SPANXCQ9NY87 97 aa9.25□□□□□ -0.93
USE1-210ENST00000601662 GAGE2DQ9UEU5 116 aa9.25□□□□□ -0.93
USE1-210ENST00000601662 FAT1Q14517 4588 aa9.24□□□□□ -0.93
USE1-210ENST00000601662 PTTG1IPP53801 180 aa9.24□□□□□ -0.93
USE1-210ENST00000601662 SND1-IT1Q9HBX3 110 aa9.24□□□□□ -0.93
USE1-210ENST00000601662 LOC107984156A0A0G2JMH3 177 aa9.23□□□□□ -0.93
USE1-210ENST00000601662 HNRNPA3P51991 378 aaKnown RBP9.23□□□□□ -0.93
USE1-210ENST00000601662 TAL2Q16559 108 aa9.23□□□□□ -0.93
USE1-210ENST00000601662 ARL17AQ8IVW1 177 aa9.23□□□□□ -0.93
USE1-210ENST00000601662 HIST1H4GQ99525 98 aa9.23□□□□□ -0.93
USE1-210ENST00000601662 PPDPFQ9H3Y8 114 aa9.23□□□□□ -0.93
USE1-210ENST00000601662 Q6ZSA8 131 aa9.22□□□□□ -0.93
USE1-210ENST00000601662 C2orf91Q6ZV80 131 aa9.22□□□□□ -0.93
USE1-210ENST00000601662 DAND5Q8N907 189 aa9.22□□□□□ -0.93
USE1-210ENST00000601662 DPH3Q96FX2 82 aa9.22□□□□□ -0.93
USE1-210ENST00000601662 TP73-AS1Q9UF72 201 aa9.22□□□□□ -0.93
USE1-210ENST00000601662 A0A096LNI7 61 aa9.21□□□□□ -0.94
USE1-210ENST00000601662 Q5VSD8 79 aa9.21□□□□□ -0.94
USE1-210ENST00000601662 SCXQ7RTU7 201 aa9.21□□□□□ -0.94
USE1-210ENST00000601662 LINC00308Q8TCZ7 52 aa9.21□□□□□ -0.94
USE1-210ENST00000601662 XAGE1AQ9HD64 81 aa9.21□□□□□ -0.94
USE1-210ENST00000601662 IGKV2-24A0A0C4DH68 120 aa9.2□□□□□ -0.94
USE1-210ENST00000601662 RPL24P83731 157 aaKnown RBP9.2□□□□□ -0.94
USE1-210ENST00000601662 FAM229AH3BQW9 127 aa9.19□□□□□ -0.94
USE1-210ENST00000601662 MUSTN1Q8IVN3 82 aa9.19□□□□□ -0.94
USE1-210ENST00000601662 PLA2G2DQ9UNK4 145 aa9.19□□□□□ -0.94
USE1-210ENST00000601662 HSD52Q0P140 79 aa9.18□□□□□ -0.94
USE1-210ENST00000601662 C9orf129Q5T035 196 aaKnown RBP9.18□□□□□ -0.94
USE1-210ENST00000601662 CIRBP-AS1Q8TBR5 109 aa9.18□□□□□ -0.94
USE1-210ENST00000601662 NDUFC2O95298 119 aa9.17□□□□□ -0.94
USE1-210ENST00000601662 NPC2P61916 151 aa9.17□□□□□ -0.94
USE1-210ENST00000601662 SPACA4Q8TDM5 124 aa9.17□□□□□ -0.94
USE1-210ENST00000601662 CHTF8P0CG12 524 aa9.16□□□□□ -0.94
USE1-210ENST00000601662 SOSTDC1Q6X4U4 206 aa9.16□□□□□ -0.94
USE1-210ENST00000601662 CEND1Q8N111 149 aa9.16□□□□□ -0.94
USE1-210ENST00000601662 LINC00528Q8N1L1 170 aa9.16□□□□□ -0.94
USE1-210ENST00000601662 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.16□□□□□ -0.94
USE1-210ENST00000601662 PANO1I0J062 215 aa9.15□□□□□ -0.94
USE1-210ENST00000601662 DDTP30046 118 aa9.15□□□□□ -0.94
USE1-210ENST00000601662 TMEM238LA0A1B0GVL6 79 aa9.14□□□□□ -0.95
USE1-210ENST00000601662 A6NJY4 79 aa9.14□□□□□ -0.95
USE1-210ENST00000601662 INAFM2P0DMQ5 153 aa9.14□□□□□ -0.95
USE1-210ENST00000601662 CTAG1AP78358 180 aa9.14□□□□□ -0.95
USE1-210ENST00000601662 IGLV5-37A0A075B6J1 123 aa9.13□□□□□ -0.95
USE1-210ENST00000601662 EIF4EBP3O60516 100 aaPredicted RBP9.13□□□□□ -0.95
USE1-210ENST00000601662 NKAPP1Q8N9T2 125 aa9.13□□□□□ -0.95
USE1-210ENST00000601662 A0A087WYN8 130 aa9.12□□□□□ -0.95
USE1-210ENST00000601662 TRBV10-2A0A0K0K1G8 114 aa9.12□□□□□ -0.95
USE1-210ENST00000601662 M0R143 59 aa9.12□□□□□ -0.95
USE1-210ENST00000601662 VPREB1P12018 145 aa9.12□□□□□ -0.95
USE1-210ENST00000601662 LBHQ53QV2 105 aaPredicted RBP9.12□□□□□ -0.95
USE1-210ENST00000601662 VPS13BQ7Z7G8 4022 aa9.12□□□□□ -0.95
USE1-210ENST00000601662 SRRM2Q9UQ35 2752 aaKnown RBP9.11□□□□□ -0.95
USE1-210ENST00000601662 A0A1W2PNN7 141 aa9.11□□□□□ -0.95
USE1-210ENST00000601662 FAM168BA1KXE4 195 aa9.11□□□□□ -0.95
USE1-210ENST00000601662 A4D1N5 150 aa9.11□□□□□ -0.95
USE1-210ENST00000601662 M0R378 163 aa9.11□□□□□ -0.95
USE1-210ENST00000601662 PLA2G1BP04054 148 aaKnown RBP9.11□□□□□ -0.95
USE1-210ENST00000601662 FAM19A5Q7Z5A7 132 aaPredicted RBP9.11□□□□□ -0.95
USE1-210ENST00000601662 PLAC8Q9NZF1 115 aa9.11□□□□□ -0.95
USE1-210ENST00000601662 SERTAD4-AS1Q5TG53 156 aa9.1□□□□□ -0.95
USE1-210ENST00000601662 C22orf24Q9Y442 160 aa9.1□□□□□ -0.95
USE1-210ENST00000601662 FLG2Q5D862 2391 aaPredicted RBP9.1□□□□□ -0.95
USE1-210ENST00000601662 TRAV13-2A0A0B4J235 113 aa9.08□□□□□ -0.96
USE1-210ENST00000601662 M0QXV9 152 aa9.08□□□□□ -0.96
USE1-210ENST00000601662 PRR3P79522 188 aaKnown RBP9.08□□□□□ -0.96
USE1-210ENST00000601662 MRPL55Q7Z7F7 128 aaKnown RBP9.08□□□□□ -0.96
USE1-210ENST00000601662 CBY1Q9Y3M2 126 aa9.08□□□□□ -0.96
USE1-210ENST00000601662 NCR3O14931 201 aa9.07□□□□□ -0.96
USE1-210ENST00000601662 FXYD2P54710 66 aa9.07□□□□□ -0.96
USE1-210ENST00000601662 S100A7L2Q5SY68 101 aa9.07□□□□□ -0.96
USE1-210ENST00000601662 BVES-AS1Q5T3Y7 98 aa9.07□□□□□ -0.96
USE1-210ENST00000601662 KRTAP7-1Q8IUC3 87 aa9.07□□□□□ -0.96
USE1-210ENST00000601662 Q8NDZ9 215 aa9.07□□□□□ -0.96
USE1-210ENST00000601662 IGKV2-28A0A075B6P5 120 aa9.06□□□□□ -0.96
USE1-210ENST00000601662 PCP4L1A6NKN8 68 aa9.06□□□□□ -0.96
USE1-210ENST00000601662 IGKV2D-28P01615 120 aa9.06□□□□□ -0.96
USE1-210ENST00000601662 HINT1P49773 126 aaPredicted RBP9.06□□□□□ -0.96
USE1-210ENST00000601662 TMEM126AQ9H061 195 aa9.06□□□□□ -0.96
USE1-210ENST00000601662 A0A0B4J2C4 111 aa9.05□□□□□ -0.96
USE1-210ENST00000601662 A6NDN8 102 aa9.05□□□□□ -0.96
USE1-210ENST00000601662 CFC1BP0CG36 223 aa9.05□□□□□ -0.96
USE1-210ENST00000601662 CFC1P0CG37 223 aa9.05□□□□□ -0.96
USE1-210ENST00000601662 OR13C6PQ8NH95 151 aa9.05□□□□□ -0.96
USE1-210ENST00000601662 C7orf33Q8WU49 177 aa9.05□□□□□ -0.96
USE1-210ENST00000601662 RAB37Q96AX2 223 aa9.05□□□□□ -0.96
USE1-210ENST00000601662 LINC00167Q96N53 147 aa9.05□□□□□ -0.96
USE1-210ENST00000601662 RPL37AP61513 92 aaKnown RBP9.04□□□□□ -0.96
USE1-210ENST00000601662 IGLV6-57P01721 117 aa9.03□□□□□ -0.96
USE1-210ENST00000601662 UBE2BP63146 152 aa9.03□□□□□ -0.96
USE1-210ENST00000601662 PHF5AQ7RTV0 110 aaKnown RBP9.03□□□□□ -0.96
USE1-210ENST00000601662 LINC00337Q8N6G1 96 aa9.03□□□□□ -0.96
USE1-210ENST00000601662 NHP2Q9NX24 153 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms