RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 ANAPC11Q9NYG5 84 aa13.32□□□□□ -0.28
SSBP4-209ENST00000601357 M0R378 163 aa13.31□□□□□ -0.28
SSBP4-209ENST00000601357 TYMSOSQ8TAI1 123 aa13.31□□□□□ -0.28
SSBP4-209ENST00000601357 PRLHP81277 87 aa13.3□□□□□ -0.28
SSBP4-209ENST00000601357 KRTAP13-2Q52LG2 175 aa13.3□□□□□ -0.28
SSBP4-209ENST00000601357 HSBP1O75506 76 aa13.29□□□□□ -0.28
SSBP4-209ENST00000601357 LINC00158P58513 81 aa13.29□□□□□ -0.28
SSBP4-209ENST00000601357 PRR4Q16378 134 aa13.29□□□□□ -0.28
SSBP4-209ENST00000601357 FAM229BQ4G0N7 80 aa13.29□□□□□ -0.28
SSBP4-209ENST00000601357 FAM19A2Q8N3H0 131 aa13.29□□□□□ -0.28
SSBP4-209ENST00000601357 FAM19A1Q7Z5A9 133 aa13.28□□□□□ -0.28
SSBP4-209ENST00000601357 TSPAN13O95857 204 aa13.26□□□□□ -0.29
SSBP4-209ENST00000601357 TRGC2P03986 189 aa13.26□□□□□ -0.29
SSBP4-209ENST00000601357 LINC00310P59036 64 aa13.26□□□□□ -0.29
SSBP4-209ENST00000601357 A0A0U1RRA0 63 aa13.25□□□□□ -0.29
SSBP4-209ENST00000601357 SMIM13P0DJ93 91 aa13.24□□□□□ -0.29
SSBP4-209ENST00000601357 HERV-K104P63124 156 aa13.23□□□□□ -0.29
SSBP4-209ENST00000601357 PLEKHB2Q96CS7 222 aa13.22□□□□□ -0.29
SSBP4-209ENST00000601357 SERF1AO75920 110 aa13.21□□□□□ -0.29
SSBP4-209ENST00000601357 LEPROTL1O95214 131 aa13.2□□□□□ -0.3
SSBP4-209ENST00000601357 MIR7-3HGQ8N6C7 128 aa13.2□□□□□ -0.3
SSBP4-209ENST00000601357 NDUFA12Q9UI09 145 aa13.2□□□□□ -0.3
SSBP4-209ENST00000601357 H0Y8G0 127 aa13.19□□□□□ -0.3
SSBP4-209ENST00000601357 MEIG1Q5JSS6 88 aa13.19□□□□□ -0.3
SSBP4-209ENST00000601357 BOD1L2Q8IYS8 172 aa13.19□□□□□ -0.3
SSBP4-209ENST00000601357 IGKV2D-26A0A0A0MRZ7 120 aa13.17□□□□□ -0.3
SSBP4-209ENST00000601357 MYMXA0A1B0GTQ4 84 aa13.17□□□□□ -0.3
SSBP4-209ENST00000601357 LINC00587B1AMM8 73 aa13.17□□□□□ -0.3
SSBP4-209ENST00000601357 ATP6V1G1O75348 118 aa13.17□□□□□ -0.3
SSBP4-209ENST00000601357 TSPEAR-AS2P59090 65 aa13.17□□□□□ -0.3
SSBP4-209ENST00000601357 LINC00304Q8N9R0 145 aa13.16□□□□□ -0.3
SSBP4-209ENST00000601357 PLNP26678 52 aa13.15□□□□□ -0.3
SSBP4-209ENST00000601357 SLC7A5P1Q8MH63 180 aa13.15□□□□□ -0.3
SSBP4-209ENST00000601357 HIGD2AQ9BW72 106 aa13.15□□□□□ -0.3
SSBP4-209ENST00000601357 COLCA2A8K830 154 aa13.14□□□□□ -0.31
SSBP4-209ENST00000601357 PRYO14603 147 aa13.14□□□□□ -0.31
SSBP4-209ENST00000601357 NCR3O14931 201 aa13.14□□□□□ -0.31
SSBP4-209ENST00000601357 SPRR1AP35321 89 aa13.14□□□□□ -0.31
SSBP4-209ENST00000601357 KCNQ1DNQ9H478 68 aa13.14□□□□□ -0.31
SSBP4-209ENST00000601357 MUC2Q02817 5179 aa13.14□□□□□ -0.31
SSBP4-209ENST00000601357 LEPROTO15243 131 aa13.13□□□□□ -0.31
SSBP4-209ENST00000601357 HSPB8Q9UJY1 196 aa13.13□□□□□ -0.31
SSBP4-209ENST00000601357 LOC107984156A0A0G2JMH3 177 aa13.12□□□□□ -0.31
SSBP4-209ENST00000601357 KRTAP4-16G5E9R7 235 aaPredicted RBP13.12□□□□□ -0.31
SSBP4-209ENST00000601357 CTAG1AP78358 180 aa13.12□□□□□ -0.31
SSBP4-209ENST00000601357 ARL17AQ8IVW1 177 aa13.12□□□□□ -0.31
SSBP4-209ENST00000601357 LINC00337Q8N6G1 96 aa13.12□□□□□ -0.31
SSBP4-209ENST00000601357 SPRR4Q96PI1 79 aa13.12□□□□□ -0.31
SSBP4-209ENST00000601357 MAP1LC3CQ9BXW4 147 aa13.12□□□□□ -0.31
SSBP4-209ENST00000601357 DPM2O94777 84 aa13.1□□□□□ -0.31
SSBP4-209ENST00000601357 FABP4P15090 132 aa13.1□□□□□ -0.31
SSBP4-209ENST00000601357 C3orf22Q8N5N4 141 aa13.1□□□□□ -0.31
SSBP4-209ENST00000601357 J3QQQ9 107 aa13.09□□□□□ -0.31
SSBP4-209ENST00000601357 PMCHL2Q9BQD1 86 aa13.09□□□□□ -0.31
SSBP4-209ENST00000601357 TRBV10-3A0A0K0K1G6 114 aa13.08□□□□□ -0.32
SSBP4-209ENST00000601357 DAND5Q8N907 189 aa13.08□□□□□ -0.32
SSBP4-209ENST00000601357 RETNLBQ9BQ08 111 aa13.08□□□□□ -0.32
SSBP4-209ENST00000601357 IGKCP01834 107 aa13.06□□□□□ -0.32
SSBP4-209ENST00000601357 NMUP48645 174 aa13.06□□□□□ -0.32
SSBP4-209ENST00000601357 ZNF706Q9Y5V0 76 aaPredicted RBP13.06□□□□□ -0.32
SSBP4-209ENST00000601357 HERVK_113P61574 105 aa13.05□□□□□ -0.32
SSBP4-209ENST00000601357 TRBV10-2A0A0K0K1G8 114 aa13.03□□□□□ -0.32
SSBP4-209ENST00000601357 ETDCA0A1B0GVM5 59 aa13.03□□□□□ -0.32
SSBP4-209ENST00000601357 SMCR5Q8TEV8 140 aa13.03□□□□□ -0.32
SSBP4-209ENST00000601357 LGALS3P17931 250 aaKnown RBP13.02□□□□□ -0.33
SSBP4-209ENST00000601357 B5MCH6 92 aa13□□□□□ -0.33
SSBP4-209ENST00000601357 DDTP30046 118 aa13□□□□□ -0.33
SSBP4-209ENST00000601357 SPANXB1Q9NS25 103 aaPredicted RBP13□□□□□ -0.33
SSBP4-209ENST00000601357 LINC00483Q53H64 154 aa12.99□□□□□ -0.33
SSBP4-209ENST00000601357 SPAG11AQ6PDA7 123 aa12.99□□□□□ -0.33
SSBP4-209ENST00000601357 NDUFC2O95298 119 aa12.98□□□□□ -0.33
SSBP4-209ENST00000601357 S100A12P80511 92 aa12.98□□□□□ -0.33
SSBP4-209ENST00000601357 TPRXLQ17RH7 258 aa12.98□□□□□ -0.33
SSBP4-209ENST00000601357 E9PLD3 99 aa12.97□□□□□ -0.33
SSBP4-209ENST00000601357 MIEN1Q9BRT3 115 aa12.97□□□□□ -0.33
SSBP4-209ENST00000601357 A0A0J9YXY3 114 aa12.96□□□□□ -0.33
SSBP4-209ENST00000601357 HIST1H2BKO60814 126 aa12.96□□□□□ -0.33
SSBP4-209ENST00000601357 IGLV6-57P01721 117 aa12.96□□□□□ -0.33
SSBP4-209ENST00000601357 HIST1H2BJP06899 126 aa12.96□□□□□ -0.33
SSBP4-209ENST00000601357 HIST1H2BOP23527 126 aa12.96□□□□□ -0.33
SSBP4-209ENST00000601357 HIST1H2BBP33778 126 aa12.96□□□□□ -0.33
SSBP4-209ENST00000601357 HIST1H2BDP58876 126 aa12.96□□□□□ -0.33
SSBP4-209ENST00000601357 HIST1H2BCP62807 126 aa12.96□□□□□ -0.33
SSBP4-209ENST00000601357 HIST2H2BEQ16778 126 aa12.96□□□□□ -0.33
SSBP4-209ENST00000601357 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.96□□□□□ -0.33
SSBP4-209ENST00000601357 HIST1H2BHQ93079 126 aa12.96□□□□□ -0.33
SSBP4-209ENST00000601357 HIST1H2BNQ99877 126 aa12.96□□□□□ -0.33
SSBP4-209ENST00000601357 HIST1H2BMQ99879 126 aa12.96□□□□□ -0.33
SSBP4-209ENST00000601357 IGLV7-46A0A075B6I9 117 aa12.95□□□□□ -0.34
SSBP4-209ENST00000601357 EIF4EBP3O60516 100 aaPredicted RBP12.95□□□□□ -0.34
SSBP4-209ENST00000601357 ADAMTSL4-AS1Q5T5F5 129 aa12.95□□□□□ -0.34
SSBP4-209ENST00000601357 SOSTDC1Q6X4U4 206 aa12.95□□□□□ -0.34
SSBP4-209ENST00000601357 PPDPFQ9H3Y8 114 aa12.95□□□□□ -0.34
SSBP4-209ENST00000601357 SYS1-DBNDD2H3BUS1 97 aa12.94□□□□□ -0.34
SSBP4-209ENST00000601357 ERC2-IT1O76042 136 aa12.94□□□□□ -0.34
SSBP4-209ENST00000601357 Q6ZRX8 168 aa12.94□□□□□ -0.34
SSBP4-209ENST00000601357 Q9BRP9 147 aa12.94□□□□□ -0.34
SSBP4-209ENST00000601357 Q8NBF4 154 aa12.93□□□□□ -0.34
SSBP4-209ENST00000601357 C4orf48Q5BLP8 95 aa12.9□□□□□ -0.34
SSBP4-209ENST00000601357 S100A7L2Q5SY68 101 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms