RNA–Protein interactions for RNA: ENST00000601253.5

SNRPA-209, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-209ENST00000601253 E9PLD3 99 aa8.58□□□□□ -1.04
SNRPA-209ENST00000601253 LGALS3P17931 250 aaKnown RBP8.58□□□□□ -1.04
SNRPA-209ENST00000601253 S100A2P29034 98 aa8.58□□□□□ -1.04
SNRPA-209ENST00000601253 TSPEAR-AS2P59090 65 aa8.58□□□□□ -1.04
SNRPA-209ENST00000601253 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
SNRPA-209ENST00000601253 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
SNRPA-209ENST00000601253 LINC00158P58513 81 aa8.57□□□□□ -1.04
SNRPA-209ENST00000601253 LBHQ53QV2 105 aaPredicted RBP8.57□□□□□ -1.04
SNRPA-209ENST00000601253 SND1-IT1Q9HBX3 110 aa8.57□□□□□ -1.04
SNRPA-209ENST00000601253 IGLV5-37A0A075B6J1 123 aa8.56□□□□□ -1.04
SNRPA-209ENST00000601253 MEIG1Q5JSS6 88 aa8.56□□□□□ -1.04
SNRPA-209ENST00000601253 HIST1H2BLQ99880 126 aa8.56□□□□□ -1.04
SNRPA-209ENST00000601253 C22orf24Q9Y442 160 aa8.56□□□□□ -1.04
SNRPA-209ENST00000601253 UBE2BP63146 152 aa8.55□□□□□ -1.04
SNRPA-209ENST00000601253 PSORS1C2Q9UIG4 136 aa8.55□□□□□ -1.04
SNRPA-209ENST00000601253 SMIM13P0DJ93 91 aa8.54□□□□□ -1.04
SNRPA-209ENST00000601253 HNRNPA3P51991 378 aaKnown RBP8.54□□□□□ -1.04
SNRPA-209ENST00000601253 RPL24P83731 157 aaKnown RBP8.54□□□□□ -1.04
SNRPA-209ENST00000601253 MRPL55Q7Z7F7 128 aaKnown RBP8.54□□□□□ -1.04
SNRPA-209ENST00000601253 NKAPP1Q8N9T2 125 aa8.53□□□□□ -1.04
SNRPA-209ENST00000601253 A0A0U1RRA0 63 aa8.52□□□□□ -1.05
SNRPA-209ENST00000601253 C1orf137Q5JT78 98 aa8.52□□□□□ -1.05
SNRPA-209ENST00000601253 FLG2Q5D862 2391 aaPredicted RBP8.52□□□□□ -1.05
SNRPA-209ENST00000601253 VPREB1P12018 145 aa8.51□□□□□ -1.05
SNRPA-209ENST00000601253 SPINK6Q6UWN8 80 aa8.51□□□□□ -1.05
SNRPA-209ENST00000601253 KRTAP11-1Q8IUC1 163 aa8.51□□□□□ -1.05
SNRPA-209ENST00000601253 MIR7-3HGQ8N6C7 128 aa8.51□□□□□ -1.05
SNRPA-209ENST00000601253 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.05
SNRPA-209ENST00000601253 LINC00167Q96N53 147 aa8.5□□□□□ -1.05
SNRPA-209ENST00000601253 MYCBP2O75592 4640 aa8.49□□□□□ -1.05
SNRPA-209ENST00000601253 KRTAP29-1A8MX34 341 aaPredicted RBP8.49□□□□□ -1.05
SNRPA-209ENST00000601253 IGKV2D-26A0A0A0MRZ7 120 aa8.48□□□□□ -1.05
SNRPA-209ENST00000601253 A0A0J9YXY3 114 aa8.48□□□□□ -1.05
SNRPA-209ENST00000601253 OXTP01178 125 aa8.48□□□□□ -1.05
SNRPA-209ENST00000601253 IGLV7-43P04211 117 aa8.48□□□□□ -1.05
SNRPA-209ENST00000601253 PKHD1L1Q86WI1 4243 aa8.48□□□□□ -1.05
SNRPA-209ENST00000601253 LOC107984156A0A0G2JMH3 177 aa8.47□□□□□ -1.05
SNRPA-209ENST00000601253 GAGE10A6NGK3 116 aa8.47□□□□□ -1.05
SNRPA-209ENST00000601253 ARL17AQ8IVW1 177 aa8.47□□□□□ -1.05
SNRPA-209ENST00000601253 BOD1L2Q8IYS8 172 aa8.47□□□□□ -1.05
SNRPA-209ENST00000601253 ATOH7Q8N100 152 aa8.47□□□□□ -1.05
SNRPA-209ENST00000601253 RPL37AP8A6NKH3 93 aa8.46□□□□□ -1.06
SNRPA-209ENST00000601253 ZNF815PA8K554 130 aa8.46□□□□□ -1.06
SNRPA-209ENST00000601253 TIMM17BO60830 172 aa8.46□□□□□ -1.06
SNRPA-209ENST00000601253 Q8NDZ9 215 aa8.46□□□□□ -1.06
SNRPA-209ENST00000601253 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.06
SNRPA-209ENST00000601253 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
SNRPA-209ENST00000601253 M0R378 163 aa8.45□□□□□ -1.06
SNRPA-209ENST00000601253 ANKRD39Q53RE8 183 aa8.45□□□□□ -1.06
SNRPA-209ENST00000601253 DAND5Q8N907 189 aa8.45□□□□□ -1.06
SNRPA-209ENST00000601253 MIEN1Q9BRT3 115 aa8.45□□□□□ -1.06
SNRPA-209ENST00000601253 IGLV1-50A0A075B6I6 118 aa8.44□□□□□ -1.06
SNRPA-209ENST00000601253 TSTD3H0UI37 97 aa8.44□□□□□ -1.06
SNRPA-209ENST00000601253 BCE1O60756 84 aa8.44□□□□□ -1.06
SNRPA-209ENST00000601253 REG3GQ6UW15 175 aa8.44□□□□□ -1.06
SNRPA-209ENST00000601253 DIRC1Q969H9 104 aa8.44□□□□□ -1.06
SNRPA-209ENST00000601253 DMBT1Q9UGM3 2413 aaPredicted RBP8.43□□□□□ -1.06
SNRPA-209ENST00000601253 HSBP1L1C9JCN9 74 aa8.43□□□□□ -1.06
SNRPA-209ENST00000601253 J3QL48 77 aa8.43□□□□□ -1.06
SNRPA-209ENST00000601253 PYY3Q5JQD4 70 aa8.43□□□□□ -1.06
SNRPA-209ENST00000601253 IGKV2-28A0A075B6P5 120 aa8.42□□□□□ -1.06
SNRPA-209ENST00000601253 IGKV2D-28P01615 120 aa8.42□□□□□ -1.06
SNRPA-209ENST00000601253 JOSD1Q15040 202 aaPredicted RBP8.42□□□□□ -1.06
SNRPA-209ENST00000601253 ADAMTSL4-AS1Q5T5F5 129 aa8.42□□□□□ -1.06
SNRPA-209ENST00000601253 LITAFQ99732 161 aa8.42□□□□□ -1.06
SNRPA-209ENST00000601253 TTTY13Q9BZ97 58 aa8.42□□□□□ -1.06
SNRPA-209ENST00000601253 TRBV10-2A0A0K0K1G8 114 aa8.41□□□□□ -1.06
SNRPA-209ENST00000601253 ZNF861PO60384 105 aa8.41□□□□□ -1.06
SNRPA-209ENST00000601253 NDUFC2O95298 119 aa8.41□□□□□ -1.06
SNRPA-209ENST00000601253 SCGB1D1O95968 90 aa8.41□□□□□ -1.06
SNRPA-209ENST00000601253 RPL28P46779 137 aaKnown RBP8.41□□□□□ -1.06
SNRPA-209ENST00000601253 SCGB1D4Q6XE38 83 aa8.41□□□□□ -1.06
SNRPA-209ENST00000601253 H0Y9J4 135 aa8.4□□□□□ -1.06
SNRPA-209ENST00000601253 SPANXB1Q9NS25 103 aaPredicted RBP8.4□□□□□ -1.06
SNRPA-209ENST00000601253 FAT3Q8TDW7 4589 aa8.4□□□□□ -1.06
SNRPA-209ENST00000601253 LRP1Q07954 4544 aaKnown RBP8.4□□□□□ -1.07
SNRPA-209ENST00000601253 TMEM238C9JI98 176 aa8.39□□□□□ -1.07
SNRPA-209ENST00000601253 NCR3O14931 201 aa8.39□□□□□ -1.07
SNRPA-209ENST00000601253 PCP2Q8IVA1 136 aa8.39□□□□□ -1.07
SNRPA-209ENST00000601253 TMEM126AQ9H061 195 aa8.39□□□□□ -1.07
SNRPA-209ENST00000601253 SOSTDC1Q6X4U4 206 aa8.38□□□□□ -1.07
SNRPA-209ENST00000601253 LINC00308Q8TCZ7 52 aa8.38□□□□□ -1.07
SNRPA-209ENST00000601253 LINC01600Q96MT4 127 aa8.38□□□□□ -1.07
SNRPA-209ENST00000601253 PRYO14603 147 aa8.37□□□□□ -1.07
SNRPA-209ENST00000601253 UBE2AP49459 152 aa8.37□□□□□ -1.07
SNRPA-209ENST00000601253 COPS9Q8WXC6 57 aa8.37□□□□□ -1.07
SNRPA-209ENST00000601253 SPANXDQ9BXN6 97 aa8.37□□□□□ -1.07
SNRPA-209ENST00000601253 SPANXCQ9NY87 97 aa8.37□□□□□ -1.07
SNRPA-209ENST00000601253 EIF4EBP3O60516 100 aaPredicted RBP8.36□□□□□ -1.07
SNRPA-209ENST00000601253 DDTP30046 118 aa8.36□□□□□ -1.07
SNRPA-209ENST00000601253 NPC2P61916 151 aa8.36□□□□□ -1.07
SNRPA-209ENST00000601253 Q6ZVH6 145 aa8.36□□□□□ -1.07
SNRPA-209ENST00000601253 KRTAP13-1Q8IUC0 172 aa8.36□□□□□ -1.07
SNRPA-209ENST00000601253 PPDPFQ9H3Y8 114 aa8.36□□□□□ -1.07
SNRPA-209ENST00000601253 KCNQ1DNQ9H478 68 aa8.36□□□□□ -1.07
SNRPA-209ENST00000601253 TRBV10-3A0A0K0K1G6 114 aa8.35□□□□□ -1.07
SNRPA-209ENST00000601253 IFITM1P13164 125 aa8.35□□□□□ -1.07
SNRPA-209ENST00000601253 MT1HL1P0DM35 61 aa8.34□□□□□ -1.07
SNRPA-209ENST00000601253 FAM19A1Q7Z5A9 133 aa8.34□□□□□ -1.07
SNRPA-209ENST00000601253 IGLV6-57P01721 117 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms