RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 PLEKHB2Q96CS7 222 aa6.02□□□□□ -1.45
HIF3A-219ENST00000600879 PKIGQ9Y2B9 76 aa6.02□□□□□ -1.45
HIF3A-219ENST00000600879 E9PLD3 99 aa6.01□□□□□ -1.45
HIF3A-219ENST00000600879 LGALS3P17931 250 aaKnown RBP6.01□□□□□ -1.45
HIF3A-219ENST00000600879 C10orf25Q5T742 122 aa6.01□□□□□ -1.45
HIF3A-219ENST00000600879 UNQ6190/PRO20217Q6UXQ8 127 aa6.01□□□□□ -1.45
HIF3A-219ENST00000600879 LOC107984640A0A0U1RRK4 108 aa6□□□□□ -1.45
HIF3A-219ENST00000600879 HSBP1L1C9JCN9 74 aa6□□□□□ -1.45
HIF3A-219ENST00000600879 J3QQQ9 107 aa6□□□□□ -1.45
HIF3A-219ENST00000600879 TSPEAR-AS2P59090 65 aa6□□□□□ -1.45
HIF3A-219ENST00000600879 ANKRD39Q53RE8 183 aa6□□□□□ -1.45
HIF3A-219ENST00000600879 C9orf116Q5BN46 136 aaPredicted RBP6□□□□□ -1.45
HIF3A-219ENST00000600879 DIRC1Q969H9 104 aa6□□□□□ -1.45
HIF3A-219ENST00000600879 C6orf48Q9UBA6 75 aa6□□□□□ -1.45
HIF3A-219ENST00000600879 TRBV30A0A0K0K1B3 111 aa5.99□□□□□ -1.45
HIF3A-219ENST00000600879 IGLV7-43P04211 117 aa5.99□□□□□ -1.45
HIF3A-219ENST00000600879 NMUP48645 174 aa5.99□□□□□ -1.45
HIF3A-219ENST00000600879 RPL18AQ02543 176 aaKnown RBP5.99□□□□□ -1.45
HIF3A-219ENST00000600879 RNF151Q2KHN1 245 aa5.99□□□□□ -1.45
HIF3A-219ENST00000600879 PYY3Q5JQD4 70 aa5.99□□□□□ -1.45
HIF3A-219ENST00000600879 ZNF625Q96I27 306 aaPredicted RBP5.99□□□□□ -1.45
HIF3A-219ENST00000600879 NDUFA12Q9UI09 145 aa5.99□□□□□ -1.45
HIF3A-219ENST00000600879 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
HIF3A-219ENST00000600879 IGKV2D-26A0A0A0MRZ7 120 aa5.98□□□□□ -1.45
HIF3A-219ENST00000600879 MYMXA0A1B0GTQ4 84 aa5.98□□□□□ -1.45
HIF3A-219ENST00000600879 H0Y9J4 135 aa5.98□□□□□ -1.45
HIF3A-219ENST00000600879 SFTA2Q6UW10 78 aa5.98□□□□□ -1.45
HIF3A-219ENST00000600879 KRTAP11-1Q8IUC1 163 aa5.98□□□□□ -1.45
HIF3A-219ENST00000600879 IGLV1-50A0A075B6I6 118 aa5.97□□□□□ -1.45
HIF3A-219ENST00000600879 LOC105371267A0A1B0GV96 52 aa5.97□□□□□ -1.45
HIF3A-219ENST00000600879 TSPAN13O95857 204 aa5.97□□□□□ -1.45
HIF3A-219ENST00000600879 HERV-K104P63124 156 aa5.97□□□□□ -1.45
HIF3A-219ENST00000600879 VAMP8Q9BV40 100 aa5.97□□□□□ -1.45
HIF3A-219ENST00000600879 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
HIF3A-219ENST00000600879 ZNF815PA8K554 130 aa5.96□□□□□ -1.46
HIF3A-219ENST00000600879 KRTAP1-4P0C5Y4 121 aa5.96□□□□□ -1.46
HIF3A-219ENST00000600879 SPATA45Q537H7 98 aa5.96□□□□□ -1.46
HIF3A-219ENST00000600879 MEIG1Q5JSS6 88 aa5.96□□□□□ -1.46
HIF3A-219ENST00000600879 TTTY13Q9BZ97 58 aa5.96□□□□□ -1.46
HIF3A-219ENST00000600879 ERG28Q9UKR5 140 aa5.96□□□□□ -1.46
HIF3A-219ENST00000600879 PAM16Q9Y3D7 125 aa5.96□□□□□ -1.46
HIF3A-219ENST00000600879 FAM168BA1KXE4 195 aa5.95□□□□□ -1.46
HIF3A-219ENST00000600879 PFN2P35080 140 aa5.95□□□□□ -1.46
HIF3A-219ENST00000600879 A0A0U1RRA0 63 aa5.94□□□□□ -1.46
HIF3A-219ENST00000600879 NDUFC2-KCTD14E9PQ53 114 aa5.94□□□□□ -1.46
HIF3A-219ENST00000600879 TLX1NBP0CAT3 122 aa5.94□□□□□ -1.46
HIF3A-219ENST00000600879 LINC00158P58513 81 aa5.94□□□□□ -1.46
HIF3A-219ENST00000600879 PCP2Q8IVA1 136 aa5.94□□□□□ -1.46
HIF3A-219ENST00000600879 A0A0J9YXY3 114 aa5.93□□□□□ -1.46
HIF3A-219ENST00000600879 LINC00587B1AMM8 73 aa5.93□□□□□ -1.46
HIF3A-219ENST00000600879 SMIM13P0DJ93 91 aa5.93□□□□□ -1.46
HIF3A-219ENST00000600879 S100A12P80511 92 aa5.93□□□□□ -1.46
HIF3A-219ENST00000600879 COX17Q14061 63 aa5.93□□□□□ -1.46
HIF3A-219ENST00000600879 GAGE2EQ4V326 116 aa5.93□□□□□ -1.46
HIF3A-219ENST00000600879 FAM19A5Q7Z5A7 132 aaPredicted RBP5.93□□□□□ -1.46
HIF3A-219ENST00000600879 GAGE2DQ9UEU5 116 aa5.93□□□□□ -1.46
HIF3A-219ENST00000600879 SMIM6P0DI80 62 aa5.92□□□□□ -1.46
HIF3A-219ENST00000600879 SCGB1D4Q6XE38 83 aa5.92□□□□□ -1.46
HIF3A-219ENST00000600879 COX8AP10176 69 aa5.91□□□□□ -1.46
HIF3A-219ENST00000600879 RPL13AP40429 203 aaKnown RBP5.91□□□□□ -1.46
HIF3A-219ENST00000600879 MIR7-3HGQ8N6C7 128 aa5.91□□□□□ -1.46
HIF3A-219ENST00000600879 C14orf144Q96I85 54 aa5.91□□□□□ -1.46
HIF3A-219ENST00000600879 XAGE1AQ9HD64 81 aa5.91□□□□□ -1.46
HIF3A-219ENST00000600879 TIMM17BO60830 172 aa5.9□□□□□ -1.46
HIF3A-219ENST00000600879 BOD1L2Q8IYS8 172 aa5.9□□□□□ -1.46
HIF3A-219ENST00000600879 UBE2BP63146 152 aa5.89□□□□□ -1.47
HIF3A-219ENST00000600879 C9orf129Q5T035 196 aaKnown RBP5.89□□□□□ -1.47
HIF3A-219ENST00000600879 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
HIF3A-219ENST00000600879 SLC25A34Q6PIV7 304 aa5.89□□□□□ -1.47
HIF3A-219ENST00000600879 DAND5Q8N907 189 aa5.89□□□□□ -1.47
HIF3A-219ENST00000600879 SND1-IT1Q9HBX3 110 aa5.89□□□□□ -1.47
HIF3A-219ENST00000600879 TP73-AS1Q9UF72 201 aa5.89□□□□□ -1.47
HIF3A-219ENST00000600879 TMEM238C9JI98 176 aa5.88□□□□□ -1.47
HIF3A-219ENST00000600879 DLEU1O43261 78 aa5.88□□□□□ -1.47
HIF3A-219ENST00000600879 NPC2P61916 151 aa5.88□□□□□ -1.47
HIF3A-219ENST00000600879 ADAMTSL4-AS1Q5T5F5 129 aa5.88□□□□□ -1.47
HIF3A-219ENST00000600879 LITAFQ99732 161 aa5.88□□□□□ -1.47
HIF3A-219ENST00000600879 RETNLBQ9BQ08 111 aa5.88□□□□□ -1.47
HIF3A-219ENST00000600879 MUC17Q685J3 4493 aa5.87□□□□□ -1.47
HIF3A-219ENST00000600879 M0QXV9 152 aa5.87□□□□□ -1.47
HIF3A-219ENST00000600879 KRTAP7-1Q8IUC3 87 aa5.87□□□□□ -1.47
HIF3A-219ENST00000600879 C12orf57Q99622 126 aa5.87□□□□□ -1.47
HIF3A-219ENST00000600879 MIEN1Q9BRT3 115 aa5.87□□□□□ -1.47
HIF3A-219ENST00000600879 SPANXDQ9BXN6 97 aa5.87□□□□□ -1.47
HIF3A-219ENST00000600879 SPANXCQ9NY87 97 aa5.87□□□□□ -1.47
HIF3A-219ENST00000600879 PRO1933Q9H354 126 aa5.86□□□□□ -1.47
HIF3A-219ENST00000600879 A0A087X002 238 aa5.85□□□□□ -1.47
HIF3A-219ENST00000600879 LINC00308Q8TCZ7 52 aa5.85□□□□□ -1.47
HIF3A-219ENST00000600879 CDIP1Q9H305 208 aa5.85□□□□□ -1.47
HIF3A-219ENST00000600879 SPANXB1Q9NS25 103 aaPredicted RBP5.85□□□□□ -1.47
HIF3A-219ENST00000600879 RPL24P83731 157 aaKnown RBP5.84□□□□□ -1.47
HIF3A-219ENST00000600879 SOSTDC1Q6X4U4 206 aa5.84□□□□□ -1.47
HIF3A-219ENST00000600879 C2orf91Q6ZV80 131 aa5.84□□□□□ -1.47
HIF3A-219ENST00000600879 Q6ZVH6 145 aa5.84□□□□□ -1.47
HIF3A-219ENST00000600879 LINC00518Q8N0U6 118 aa5.84□□□□□ -1.47
HIF3A-219ENST00000600879 NKAPP1Q8N9T2 125 aa5.84□□□□□ -1.47
HIF3A-219ENST00000600879 COPS9Q8WXC6 57 aa5.84□□□□□ -1.47
HIF3A-219ENST00000600879 HIGD1BQ9P298 99 aa5.84□□□□□ -1.47
HIF3A-219ENST00000600879 UQCR10Q9UDW1 63 aa5.84□□□□□ -1.47
HIF3A-219ENST00000600879 LOC107984156A0A0G2JMH3 177 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms