RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 RPL24P83731 157 aaKnown RBP8.81□□□□□ -1
SHKBP1-226ENST00000600791 SFTA2Q6UW10 78 aa8.81□□□□□ -1
SHKBP1-226ENST00000600791 TMEM126AQ9H061 195 aa8.81□□□□□ -1
SHKBP1-226ENST00000600791 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
SHKBP1-226ENST00000600791 FAM19A1Q7Z5A9 133 aa8.8□□□□□ -1
SHKBP1-226ENST00000600791 CHTOPQ9Y3Y2 248 aaKnown RBP8.8□□□□□ -1
SHKBP1-226ENST00000600791 M0R378 163 aa8.78□□□□□ -1
SHKBP1-226ENST00000600791 YPEL4Q96NS1 127 aa8.77□□□□□ -1.01
SHKBP1-226ENST00000600791 TMEM223A0PJW6 202 aa8.76□□□□□ -1.01
SHKBP1-226ENST00000600791 LINC00158P58513 81 aa8.76□□□□□ -1.01
SHKBP1-226ENST00000600791 CBLN2Q8IUK8 224 aa8.76□□□□□ -1.01
SHKBP1-226ENST00000600791 CHCHD1Q96BP2 118 aaKnown RBP8.76□□□□□ -1.01
SHKBP1-226ENST00000600791 TRAV12-1A0A0B4J245 112 aa8.75□□□□□ -1.01
SHKBP1-226ENST00000600791 LINC00304Q8N9R0 145 aa8.75□□□□□ -1.01
SHKBP1-226ENST00000600791 IFI27L1Q96BM0 104 aa8.75□□□□□ -1.01
SHKBP1-226ENST00000600791 IGKV2D-26A0A0A0MRZ7 120 aa8.74□□□□□ -1.01
SHKBP1-226ENST00000600791 A0A0U1RRA0 63 aa8.74□□□□□ -1.01
SHKBP1-226ENST00000600791 PLEKHB2Q96CS7 222 aa8.73□□□□□ -1.01
SHKBP1-226ENST00000600791 RETNLBQ9BQ08 111 aa8.73□□□□□ -1.01
SHKBP1-226ENST00000600791 HIGD2AQ9BW72 106 aa8.72□□□□□ -1.01
SHKBP1-226ENST00000600791 SMIM13P0DJ93 91 aa8.71□□□□□ -1.02
SHKBP1-226ENST00000600791 COLCA2A8K830 154 aa8.7□□□□□ -1.02
SHKBP1-226ENST00000600791 TMA7Q9Y2S6 64 aaKnown RBP8.7□□□□□ -1.02
SHKBP1-226ENST00000600791 HSBP1O75506 76 aa8.69□□□□□ -1.02
SHKBP1-226ENST00000600791 MEIG1Q5JSS6 88 aa8.69□□□□□ -1.02
SHKBP1-226ENST00000600791 BOD1L2Q8IYS8 172 aa8.69□□□□□ -1.02
SHKBP1-226ENST00000600791 FAM19A2Q8N3H0 131 aa8.69□□□□□ -1.02
SHKBP1-226ENST00000600791 C3orf22Q8N5N4 141 aa8.69□□□□□ -1.02
SHKBP1-226ENST00000600791 MIR7-3HGQ8N6C7 128 aa8.69□□□□□ -1.02
SHKBP1-226ENST00000600791 NCR3O14931 201 aa8.68□□□□□ -1.02
SHKBP1-226ENST00000600791 HERV-K104P63124 156 aa8.68□□□□□ -1.02
SHKBP1-226ENST00000600791 PRYO14603 147 aa8.67□□□□□ -1.02
SHKBP1-226ENST00000600791 SPRR4Q96PI1 79 aa8.67□□□□□ -1.02
SHKBP1-226ENST00000600791 NDUFA12Q9UI09 145 aa8.67□□□□□ -1.02
SHKBP1-226ENST00000600791 H0Y8G0 127 aa8.66□□□□□ -1.02
SHKBP1-226ENST00000600791 SPRR1AP35321 89 aa8.65□□□□□ -1.02
SHKBP1-226ENST00000600791 CTAG1AP78358 180 aa8.65□□□□□ -1.02
SHKBP1-226ENST00000600791 KCNQ1DNQ9H478 68 aa8.65□□□□□ -1.02
SHKBP1-226ENST00000600791 MYMXA0A1B0GTQ4 84 aa8.64□□□□□ -1.03
SHKBP1-226ENST00000600791 LINC00587B1AMM8 73 aa8.64□□□□□ -1.03
SHKBP1-226ENST00000600791 TRGC2P03986 189 aa8.64□□□□□ -1.03
SHKBP1-226ENST00000600791 LINC00310P59036 64 aa8.64□□□□□ -1.03
SHKBP1-226ENST00000600791 TSPEAR-AS2P59090 65 aa8.64□□□□□ -1.03
SHKBP1-226ENST00000600791 TPRXLQ17RH7 258 aa8.64□□□□□ -1.03
SHKBP1-226ENST00000600791 LINC00337Q8N6G1 96 aa8.64□□□□□ -1.03
SHKBP1-226ENST00000600791 ZNF706Q9Y5V0 76 aaPredicted RBP8.64□□□□□ -1.03
SHKBP1-226ENST00000600791 KRTAP4-16G5E9R7 235 aaPredicted RBP8.63□□□□□ -1.03
SHKBP1-226ENST00000600791 SERF1AO75920 110 aa8.63□□□□□ -1.03
SHKBP1-226ENST00000600791 IGLV7-46A0A075B6I9 117 aa8.62□□□□□ -1.03
SHKBP1-226ENST00000600791 TRBV10-3A0A0K0K1G6 114 aa8.62□□□□□ -1.03
SHKBP1-226ENST00000600791 A0A0U1RQV1 116 aa8.62□□□□□ -1.03
SHKBP1-226ENST00000600791 LEPROTL1O95214 131 aa8.62□□□□□ -1.03
SHKBP1-226ENST00000600791 MAP1LC3CQ9BXW4 147 aa8.62□□□□□ -1.03
SHKBP1-226ENST00000600791 FAT4Q6V0I7 4981 aa8.61□□□□□ -1.03
SHKBP1-226ENST00000600791 ETDCA0A1B0GVM5 59 aa8.61□□□□□ -1.03
SHKBP1-226ENST00000600791 LEPROTO15243 131 aa8.61□□□□□ -1.03
SHKBP1-226ENST00000600791 PLNP26678 52 aa8.61□□□□□ -1.03
SHKBP1-226ENST00000600791 SPAG11AQ6PDA7 123 aa8.61□□□□□ -1.03
SHKBP1-226ENST00000600791 DAND5Q8N907 189 aa8.61□□□□□ -1.03
SHKBP1-226ENST00000600791 CDIP1Q9H305 208 aa8.61□□□□□ -1.03
SHKBP1-226ENST00000600791 MUC17Q685J3 4493 aa8.61□□□□□ -1.03
SHKBP1-226ENST00000600791 SMCR5Q8TEV8 140 aa8.6□□□□□ -1.03
SHKBP1-226ENST00000600791 PPDPFQ9H3Y8 114 aa8.59□□□□□ -1.03
SHKBP1-226ENST00000600791 LOC107984156A0A0G2JMH3 177 aa8.58□□□□□ -1.04
SHKBP1-226ENST00000600791 J3QQQ9 107 aa8.58□□□□□ -1.04
SHKBP1-226ENST00000600791 ARL17AQ8IVW1 177 aa8.58□□□□□ -1.04
SHKBP1-226ENST00000600791 Q8NBF4 154 aa8.58□□□□□ -1.04
SHKBP1-226ENST00000600791 PMCHL2Q9BQD1 86 aa8.58□□□□□ -1.04
SHKBP1-226ENST00000600791 HSPB8Q9UJY1 196 aa8.58□□□□□ -1.04
SHKBP1-226ENST00000600791 B5MCH6 92 aa8.57□□□□□ -1.04
SHKBP1-226ENST00000600791 DPM2O94777 84 aa8.57□□□□□ -1.04
SHKBP1-226ENST00000600791 FABP4P15090 132 aa8.57□□□□□ -1.04
SHKBP1-226ENST00000600791 S100A12P80511 92 aa8.57□□□□□ -1.04
SHKBP1-226ENST00000600791 LINC00483Q53H64 154 aa8.57□□□□□ -1.04
SHKBP1-226ENST00000600791 TRBV10-2A0A0K0K1G8 114 aa8.56□□□□□ -1.04
SHKBP1-226ENST00000600791 DDTP30046 118 aa8.56□□□□□ -1.04
SHKBP1-226ENST00000600791 HERVK_113P61574 105 aa8.56□□□□□ -1.04
SHKBP1-226ENST00000600791 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
SHKBP1-226ENST00000600791 IGKCP01834 107 aa8.55□□□□□ -1.04
SHKBP1-226ENST00000600791 S100A6P06703 90 aa8.55□□□□□ -1.04
SHKBP1-226ENST00000600791 LGALS3P17931 250 aaKnown RBP8.55□□□□□ -1.04
SHKBP1-226ENST00000600791 NMUP48645 174 aa8.55□□□□□ -1.04
SHKBP1-226ENST00000600791 ERC2-IT1O76042 136 aa8.54□□□□□ -1.04
SHKBP1-226ENST00000600791 GAGE2AQ6NT46 116 aa8.54□□□□□ -1.04
SHKBP1-226ENST00000600791 FP248Q71RG6 208 aaPredicted RBP8.54□□□□□ -1.04
SHKBP1-226ENST00000600791 MIEN1Q9BRT3 115 aa8.54□□□□□ -1.04
SHKBP1-226ENST00000600791 SPANXB1Q9NS25 103 aaPredicted RBP8.54□□□□□ -1.04
SHKBP1-226ENST00000600791 Q9BRP9 147 aa8.53□□□□□ -1.04
SHKBP1-226ENST00000600791 LOC105371267A0A1B0GV96 52 aa8.52□□□□□ -1.05
SHKBP1-226ENST00000600791 Q6ZRX8 168 aa8.52□□□□□ -1.05
SHKBP1-226ENST00000600791 NDUFC2O95298 119 aa8.51□□□□□ -1.05
SHKBP1-226ENST00000600791 SPINK1P00995 79 aa8.51□□□□□ -1.05
SHKBP1-226ENST00000600791 IGLV6-57P01721 117 aa8.51□□□□□ -1.05
SHKBP1-226ENST00000600791 MOBPQ13875 183 aa8.51□□□□□ -1.05
SHKBP1-226ENST00000600791 LCE2AQ5TA79 106 aaPredicted RBP8.51□□□□□ -1.05
SHKBP1-226ENST00000600791 IGLV9-49A0A0B4J1Y8 123 aa8.5□□□□□ -1.05
SHKBP1-226ENST00000600791 EIF4EBP3O60516 100 aaPredicted RBP8.5□□□□□ -1.05
SHKBP1-226ENST00000600791 HIST1H2BKO60814 126 aa8.5□□□□□ -1.05
SHKBP1-226ENST00000600791 HIST1H2BJP06899 126 aa8.5□□□□□ -1.05
SHKBP1-226ENST00000600791 HIST1H2BOP23527 126 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms