RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 PKIGQ9Y2B9 76 aa6.73□□□□□ -1.33
SMG9-207ENST00000598860 FAT2Q9NYQ8 4349 aa6.72□□□□□ -1.33
SMG9-207ENST00000598860 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.72□□□□□ -1.33
SMG9-207ENST00000598860 LECT2O14960 151 aa6.72□□□□□ -1.33
SMG9-207ENST00000598860 CNBPP62633 177 aaKnown RBP6.72□□□□□ -1.33
SMG9-207ENST00000598860 HERV-K104P63124 156 aa6.72□□□□□ -1.33
SMG9-207ENST00000598860 S100A12P80511 92 aa6.72□□□□□ -1.33
SMG9-207ENST00000598860 SYCNQ0VAF6 134 aa6.72□□□□□ -1.33
SMG9-207ENST00000598860 DNAH2Q9P225 4427 aa6.72□□□□□ -1.33
SMG9-207ENST00000598860 PKD1P98161 4303 aa6.71□□□□□ -1.33
SMG9-207ENST00000598860 TRBV30A0A0K0K1B3 111 aa6.71□□□□□ -1.34
SMG9-207ENST00000598860 MYMXA0A1B0GTQ4 84 aa6.71□□□□□ -1.34
SMG9-207ENST00000598860 CARD19Q96LW7 228 aa6.71□□□□□ -1.34
SMG9-207ENST00000598860 NDUFA12Q9UI09 145 aa6.71□□□□□ -1.34
SMG9-207ENST00000598860 LINC00587B1AMM8 73 aa6.7□□□□□ -1.34
SMG9-207ENST00000598860 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.69□□□□□ -1.34
SMG9-207ENST00000598860 IGKV2D-26A0A0A0MRZ7 120 aa6.69□□□□□ -1.34
SMG9-207ENST00000598860 TSPEAR-AS2P59090 65 aa6.69□□□□□ -1.34
SMG9-207ENST00000598860 MAJINQ3KP22 176 aa6.69□□□□□ -1.34
SMG9-207ENST00000598860 SPATA45Q537H7 98 aa6.69□□□□□ -1.34
SMG9-207ENST00000598860 Q6ZVQ6 151 aa6.69□□□□□ -1.34
SMG9-207ENST00000598860 ZNF625Q96I27 306 aaPredicted RBP6.69□□□□□ -1.34
SMG9-207ENST00000598860 PKHD1P08F94 4074 aa6.69□□□□□ -1.34
SMG9-207ENST00000598860 ZNF815PA8K554 130 aa6.68□□□□□ -1.34
SMG9-207ENST00000598860 C2orf82Q6UX34 121 aa6.68□□□□□ -1.34
SMG9-207ENST00000598860 Q6ZRU5 148 aa6.68□□□□□ -1.34
SMG9-207ENST00000598860 LINC00526Q96FQ7 95 aa6.68□□□□□ -1.34
SMG9-207ENST00000598860 COX8AP10176 69 aa6.67□□□□□ -1.34
SMG9-207ENST00000598860 FUSP35637 526 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMG9-207ENST00000598860 COX17Q14061 63 aa6.67□□□□□ -1.34
SMG9-207ENST00000598860 ADAMTSL4-AS1Q5T5F5 129 aa6.67□□□□□ -1.34
SMG9-207ENST00000598860 UNQ6190/PRO20217Q6UXQ8 127 aa6.67□□□□□ -1.34
SMG9-207ENST00000598860 C9orf163Q8N9P6 203 aa6.67□□□□□ -1.34
SMG9-207ENST00000598860 DLEU1O43261 78 aa6.66□□□□□ -1.34
SMG9-207ENST00000598860 CIRBPQ14011 172 aaKnown RBP6.66□□□□□ -1.34
SMG9-207ENST00000598860 MEIG1Q5JSS6 88 aa6.66□□□□□ -1.34
SMG9-207ENST00000598860 C6orf48Q9UBA6 75 aa6.66□□□□□ -1.34
SMG9-207ENST00000598860 ERG28Q9UKR5 140 aa6.66□□□□□ -1.34
SMG9-207ENST00000598860 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
SMG9-207ENST00000598860 LOC107984640A0A0U1RRK4 108 aa6.65□□□□□ -1.34
SMG9-207ENST00000598860 TIMM17BO60830 172 aa6.65□□□□□ -1.34
SMG9-207ENST00000598860 TLX1NBP0CAT3 122 aa6.65□□□□□ -1.34
SMG9-207ENST00000598860 PCP2Q8IVA1 136 aa6.65□□□□□ -1.34
SMG9-207ENST00000598860 BOD1L2Q8IYS8 172 aa6.65□□□□□ -1.34
SMG9-207ENST00000598860 A0A0J9YXY3 114 aa6.64□□□□□ -1.35
SMG9-207ENST00000598860 NDUFC2-KCTD14E9PQ53 114 aa6.64□□□□□ -1.35
SMG9-207ENST00000598860 SLC25A34Q6PIV7 304 aa6.64□□□□□ -1.35
SMG9-207ENST00000598860 SCGB1D4Q6XE38 83 aa6.64□□□□□ -1.35
SMG9-207ENST00000598860 Q6ZRP5 223 aa6.64□□□□□ -1.35
SMG9-207ENST00000598860 C12orf57Q99622 126 aa6.64□□□□□ -1.35
SMG9-207ENST00000598860 TTTY13Q9BZ97 58 aa6.64□□□□□ -1.35
SMG9-207ENST00000598860 TMEM238C9JI98 176 aa6.63□□□□□ -1.35
SMG9-207ENST00000598860 KRTAP10-1P60331 282 aa6.63□□□□□ -1.35
SMG9-207ENST00000598860 NOTCH2NLQ7Z3S9 236 aa6.63□□□□□ -1.35
SMG9-207ENST00000598860 KIAA1109Q2LD37 5005 aa6.63□□□□□ -1.35
SMG9-207ENST00000598860 LINC00158P58513 81 aa6.62□□□□□ -1.35
SMG9-207ENST00000598860 Q6ZVH6 145 aa6.62□□□□□ -1.35
SMG9-207ENST00000598860 LINC00518Q8N0U6 118 aa6.62□□□□□ -1.35
SMG9-207ENST00000598860 C14orf144Q96I85 54 aa6.62□□□□□ -1.35
SMG9-207ENST00000598860 LITAFQ99732 161 aa6.62□□□□□ -1.35
SMG9-207ENST00000598860 UQCR10Q9UDW1 63 aa6.62□□□□□ -1.35
SMG9-207ENST00000598860 DNAH11Q96DT5 4516 aa6.62□□□□□ -1.35
SMG9-207ENST00000598860 A0A087X002 238 aa6.61□□□□□ -1.35
SMG9-207ENST00000598860 SMIM13P0DJ93 91 aa6.61□□□□□ -1.35
SMG9-207ENST00000598860 PFN2P35080 140 aa6.61□□□□□ -1.35
SMG9-207ENST00000598860 RPL18AQ02543 176 aaKnown RBP6.61□□□□□ -1.35
SMG9-207ENST00000598860 COPS9Q8WXC6 57 aa6.61□□□□□ -1.35
SMG9-207ENST00000598860 SPANXB1Q9NS25 103 aaPredicted RBP6.61□□□□□ -1.35
SMG9-207ENST00000598860 LINC00474Q9P2X8 69 aa6.61□□□□□ -1.35
SMG9-207ENST00000598860 HERC2O95714 4834 aa6.61□□□□□ -1.35
SMG9-207ENST00000598860 TSTD3H0UI37 97 aa6.6□□□□□ -1.35
SMG9-207ENST00000598860 C9orf116Q5BN46 136 aaPredicted RBP6.6□□□□□ -1.35
SMG9-207ENST00000598860 SDIM1Q6ZPB5 146 aa6.6□□□□□ -1.35
SMG9-207ENST00000598860 SPANXDQ9BXN6 97 aa6.6□□□□□ -1.35
SMG9-207ENST00000598860 SPANXCQ9NY87 97 aa6.6□□□□□ -1.35
SMG9-207ENST00000598860 HIGD1BQ9P298 99 aa6.6□□□□□ -1.35
SMG9-207ENST00000598860 DYNC1H1Q14204 4646 aaKnown RBP6.59□□□□□ -1.35
SMG9-207ENST00000598860 MIR7-3HGQ8N6C7 128 aa6.59□□□□□ -1.35
SMG9-207ENST00000598860 MIEN1Q9BRT3 115 aa6.59□□□□□ -1.35
SMG9-207ENST00000598860 PPDPFQ9H3Y8 114 aa6.59□□□□□ -1.35
SMG9-207ENST00000598860 A0A096LNI7 61 aa6.58□□□□□ -1.36
SMG9-207ENST00000598860 CFC1BP0CG36 223 aa6.58□□□□□ -1.36
SMG9-207ENST00000598860 CFC1P0CG37 223 aa6.58□□□□□ -1.36
SMG9-207ENST00000598860 IFITM1P13164 125 aa6.58□□□□□ -1.36
SMG9-207ENST00000598860 A0A087WYN8 130 aa6.57□□□□□ -1.36
SMG9-207ENST00000598860 LOC107984156A0A0G2JMH3 177 aa6.57□□□□□ -1.36
SMG9-207ENST00000598860 TAL2Q16559 108 aa6.57□□□□□ -1.36
SMG9-207ENST00000598860 ARL17AQ8IVW1 177 aa6.57□□□□□ -1.36
SMG9-207ENST00000598860 SND1-IT1Q9HBX3 110 aa6.57□□□□□ -1.36
SMG9-207ENST00000598860 HNRNPA3P51991 378 aaKnown RBP6.56□□□□□ -1.36
SMG9-207ENST00000598860 LINC01620Q4KN68 170 aa6.56□□□□□ -1.36
SMG9-207ENST00000598860 C2orf91Q6ZV80 131 aa6.56□□□□□ -1.36
SMG9-207ENST00000598860 PRO1933Q9H354 126 aa6.56□□□□□ -1.36
SMG9-207ENST00000598860 TP73-AS1Q9UF72 201 aa6.56□□□□□ -1.36
SMG9-207ENST00000598860 IGKV2-24A0A0C4DH68 120 aa6.55□□□□□ -1.36
SMG9-207ENST00000598860 EPM2AB3EWF7 344 aa6.55□□□□□ -1.36
SMG9-207ENST00000598860 Q6ZSA8 131 aa6.55□□□□□ -1.36
SMG9-207ENST00000598860 DAND5Q8N907 189 aa6.55□□□□□ -1.36
SMG9-207ENST00000598860 LINC00308Q8TCZ7 52 aa6.55□□□□□ -1.36
SMG9-207ENST00000598860 SPACA4Q8TDM5 124 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms