RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 SSPOA2VEC9 5147 aa5.02□□□□□ -1.61
LINC00343-205ENST00000598229 FCGBPQ9Y6R7 5405 aaPredicted RBP5.02□□□□□ -1.61
LINC00343-205ENST00000598229 F8W036 122 aa5.02□□□□□ -1.61
LINC00343-205ENST00000598229 VPREB1P12018 145 aa5.02□□□□□ -1.61
LINC00343-205ENST00000598229 FAM74A3Q4VXF1 159 aa5.02□□□□□ -1.61
LINC00343-205ENST00000598229 PDZD11Q5EBL8 140 aa5.02□□□□□ -1.61
LINC00343-205ENST00000598229 ZC2HC1BQ5TFG8 222 aa5.02□□□□□ -1.61
LINC00343-205ENST00000598229 SSBP3-AS1Q7Z2R9 100 aa5.02□□□□□ -1.61
LINC00343-205ENST00000598229 IGIPA6NJ69 53 aa5.01□□□□□ -1.61
LINC00343-205ENST00000598229 PRSS47A8MTI9 375 aa5.01□□□□□ -1.61
LINC00343-205ENST00000598229 RAB5BP61020 215 aa5.01□□□□□ -1.61
LINC00343-205ENST00000598229 RPL24P83731 157 aaKnown RBP5.01□□□□□ -1.61
LINC00343-205ENST00000598229 PAPPA-AS1Q5QFB9 102 aa5.01□□□□□ -1.61
LINC00343-205ENST00000598229 COX7B2Q8TF08 81 aa5.01□□□□□ -1.61
LINC00343-205ENST00000598229 SMIM7Q9BQ49 75 aa5.01□□□□□ -1.61
LINC00343-205ENST00000598229 CYSLTR1Q9Y271 337 aa5.01□□□□□ -1.61
LINC00343-205ENST00000598229 USH2AO75445 5202 aa5.01□□□□□ -1.61
LINC00343-205ENST00000598229 SMIM27A0A1W2PRY6 76 aa5□□□□□ -1.61
LINC00343-205ENST00000598229 SMIM1B2RUZ4 78 aa5□□□□□ -1.61
LINC00343-205ENST00000598229 S100A8P05109 93 aa5□□□□□ -1.61
LINC00343-205ENST00000598229 LINC00483Q53H64 154 aa5□□□□□ -1.61
LINC00343-205ENST00000598229 CFC1P0CG37 223 aa4.99□□□□□ -1.61
LINC00343-205ENST00000598229 COX6B2Q6YFQ2 88 aa4.99□□□□□ -1.61
LINC00343-205ENST00000598229 ORMDL3Q8N138 153 aa4.99□□□□□ -1.61
LINC00343-205ENST00000598229 CEBPGP53567 150 aa4.98□□□□□ -1.61
LINC00343-205ENST00000598229 TMEM136Q6ZRR5 245 aa4.98□□□□□ -1.61
LINC00343-205ENST00000598229 PRELID3AQ96N28 172 aa4.98□□□□□ -1.61
LINC00343-205ENST00000598229 IGLV5-45A0A087WSX0 123 aa4.97□□□□□ -1.61
LINC00343-205ENST00000598229 K7EMI3 77 aa4.97□□□□□ -1.61
LINC00343-205ENST00000598229 ATP5LO75964 103 aa4.97□□□□□ -1.61
LINC00343-205ENST00000598229 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
LINC00343-205ENST00000598229 SND1-IT1Q9HBX3 110 aa4.97□□□□□ -1.61
LINC00343-205ENST00000598229 LAMTOR2Q9Y2Q5 125 aa4.97□□□□□ -1.61
LINC00343-205ENST00000598229 TMA7Q9Y2S6 64 aaKnown RBP4.97□□□□□ -1.61
LINC00343-205ENST00000598229 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
LINC00343-205ENST00000598229 TINCRA0A1B0GVN0 87 aa4.96□□□□□ -1.62
LINC00343-205ENST00000598229 A0A1B0GXF2 115 aa4.96□□□□□ -1.62
LINC00343-205ENST00000598229 KRTAP4-16G5E9R7 235 aaPredicted RBP4.96□□□□□ -1.62
LINC00343-205ENST00000598229 ORMDL2Q53FV1 153 aa4.96□□□□□ -1.62
LINC00343-205ENST00000598229 SMCR5Q8TEV8 140 aa4.96□□□□□ -1.62
LINC00343-205ENST00000598229 LOC389332A0A1B0GUA5 103 aa4.95□□□□□ -1.62
LINC00343-205ENST00000598229 G0S2P27469 103 aa4.95□□□□□ -1.62
LINC00343-205ENST00000598229 PFN2P35080 140 aa4.95□□□□□ -1.62
LINC00343-205ENST00000598229 MOBPQ13875 183 aa4.95□□□□□ -1.62
LINC00343-205ENST00000598229 COX17Q14061 63 aa4.95□□□□□ -1.62
LINC00343-205ENST00000598229 AKAP14Q86UN6 197 aa4.95□□□□□ -1.62
LINC00343-205ENST00000598229 SLC51BQ86UW2 128 aa4.95□□□□□ -1.62
LINC00343-205ENST00000598229 Q8N8P6 123 aa4.95□□□□□ -1.62
LINC00343-205ENST00000598229 TIMM17AQ99595 171 aa4.95□□□□□ -1.62
LINC00343-205ENST00000598229 RAB14P61106 215 aa4.94□□□□□ -1.62
LINC00343-205ENST00000598229 MRPL54Q6P161 138 aaKnown RBP4.94□□□□□ -1.62
LINC00343-205ENST00000598229 Q8NDZ9 215 aa4.94□□□□□ -1.62
LINC00343-205ENST00000598229 MAP1LC3AQ9H492 121 aa4.94□□□□□ -1.62
LINC00343-205ENST00000598229 IGLV9-49A0A0B4J1Y8 123 aa4.93□□□□□ -1.62
LINC00343-205ENST00000598229 SPRR1AP35321 89 aa4.93□□□□□ -1.62
LINC00343-205ENST00000598229 PRYO14603 147 aa4.92□□□□□ -1.62
LINC00343-205ENST00000598229 RPL23P62829 140 aaKnown RBP4.92□□□□□ -1.62
LINC00343-205ENST00000598229 GAGE2AQ6NT46 116 aa4.92□□□□□ -1.62
LINC00343-205ENST00000598229 ERASQ7Z444 233 aa4.92□□□□□ -1.62
LINC00343-205ENST00000598229 KCNQ1DNQ9H478 68 aa4.92□□□□□ -1.62
LINC00343-205ENST00000598229 ERG28Q9UKR5 140 aa4.92□□□□□ -1.62
LINC00343-205ENST00000598229 C9orf92A6NGG3 77 aa4.91□□□□□ -1.62
LINC00343-205ENST00000598229 SRP19P09132 144 aaKnown RBP4.91□□□□□ -1.62
LINC00343-205ENST00000598229 SPINK8P0C7L1 97 aa4.91□□□□□ -1.62
LINC00343-205ENST00000598229 RGS21Q2M5E4 152 aa4.91□□□□□ -1.62
LINC00343-205ENST00000598229 ATP5L2Q7Z4Y8 100 aa4.91□□□□□ -1.62
LINC00343-205ENST00000598229 TOMM6Q96B49 74 aa4.91□□□□□ -1.62
LINC00343-205ENST00000598229 IGLV5-39A0A0G2JS06 123 aa4.9□□□□□ -1.63
LINC00343-205ENST00000598229 NXT2Q9NPJ8 142 aaKnown RBP4.9□□□□□ -1.63
LINC00343-205ENST00000598229 ETDCA0A1B0GVM5 59 aa4.89□□□□□ -1.63
LINC00343-205ENST00000598229 H3BRM9 83 aa4.89□□□□□ -1.63
LINC00343-205ENST00000598229 ADIRFQ15847 76 aa4.89□□□□□ -1.63
LINC00343-205ENST00000598229 CST9LQ9H4G1 147 aa4.89□□□□□ -1.63
LINC00343-205ENST00000598229 BATF3Q9NR55 127 aa4.89□□□□□ -1.63
LINC00343-205ENST00000598229 LINC01549A6NIU2 74 aa4.88□□□□□ -1.63
LINC00343-205ENST00000598229 IGLV6-57P01721 117 aa4.88□□□□□ -1.63
LINC00343-205ENST00000598229 SFTA2Q6UW10 78 aa4.88□□□□□ -1.63
LINC00343-205ENST00000598229 SCGB3A1Q96QR1 104 aa4.88□□□□□ -1.63
LINC00343-205ENST00000598229 LIMD2Q9BT23 127 aa4.88□□□□□ -1.63
LINC00343-205ENST00000598229 NAT8Q9UHE5 227 aa4.88□□□□□ -1.63
LINC00343-205ENST00000598229 ERC2-IT1O76042 136 aa4.87□□□□□ -1.63
LINC00343-205ENST00000598229 RPL37P61927 97 aaKnown RBP4.87□□□□□ -1.63
LINC00343-205ENST00000598229 TRAV9-1A0A075B6T8 112 aa4.86□□□□□ -1.63
LINC00343-205ENST00000598229 ALKAL2Q6UX46 152 aa4.86□□□□□ -1.63
LINC00343-205ENST00000598229 ADCYAP1P18509 176 aa4.85□□□□□ -1.63
LINC00343-205ENST00000598229 PMVKQ15126 192 aa4.85□□□□□ -1.63
LINC00343-205ENST00000598229 C9orf153Q5TBE3 101 aa4.84□□□□□ -1.63
LINC00343-205ENST00000598229 ZNF625Q96I27 306 aaPredicted RBP4.84□□□□□ -1.63
LINC00343-205ENST00000598229 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
LINC00343-205ENST00000598229 LINC00158P58513 81 aa4.83□□□□□ -1.64
LINC00343-205ENST00000598229 S100A12P80511 92 aa4.83□□□□□ -1.64
LINC00343-205ENST00000598229 TCTE3Q8IZS6 198 aa4.83□□□□□ -1.64
LINC00343-205ENST00000598229 MPLKIPQ8TAP9 179 aa4.83□□□□□ -1.64
LINC00343-205ENST00000598229 Q9BRP9 147 aa4.83□□□□□ -1.64
LINC00343-205ENST00000598229 LINC00846Q9NV44 126 aa4.83□□□□□ -1.64
LINC00343-205ENST00000598229 TRBV10-3A0A0K0K1G6 114 aa4.82□□□□□ -1.64
LINC00343-205ENST00000598229 C5orf52A6NGY3 159 aa4.82□□□□□ -1.64
LINC00343-205ENST00000598229 IGLC3P0DOY3 106 aa4.82□□□□□ -1.64
LINC00343-205ENST00000598229 MT3P25713 68 aa4.82□□□□□ -1.64
LINC00343-205ENST00000598229 KRTAP6-3Q3LI67 103 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms