RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 LEPROTO15243 131 aa10.16□□□□□ -0.78
SSBP4-204ENST00000597724 VPREB1P12018 145 aa10.16□□□□□ -0.78
SSBP4-204ENST00000597724 HERV-K104P63124 156 aa10.16□□□□□ -0.78
SSBP4-204ENST00000597724 NDUFA12Q9UI09 145 aa10.16□□□□□ -0.78
SSBP4-204ENST00000597724 A0A0U1RRA0 63 aa10.15□□□□□ -0.78
SSBP4-204ENST00000597724 GAGE10A6NGK3 116 aa10.15□□□□□ -0.78
SSBP4-204ENST00000597724 RPL37AP8A6NKH3 93 aa10.15□□□□□ -0.78
SSBP4-204ENST00000597724 H0Y9J4 135 aa10.15□□□□□ -0.78
SSBP4-204ENST00000597724 SYS1-DBNDD2H3BUS1 97 aa10.15□□□□□ -0.78
SSBP4-204ENST00000597724 TSPEAR-AS2P59090 65 aa10.15□□□□□ -0.78
SSBP4-204ENST00000597724 COA6Q5JTJ3 125 aaKnown RBP10.15□□□□□ -0.78
SSBP4-204ENST00000597724 MYMXA0A1B0GTQ4 84 aa10.14□□□□□ -0.79
SSBP4-204ENST00000597724 SMIM13P0DJ93 91 aa10.14□□□□□ -0.79
SSBP4-204ENST00000597724 S100A1P23297 94 aa10.14□□□□□ -0.79
SSBP4-204ENST00000597724 KRTAP10-8P60410 259 aa10.14□□□□□ -0.79
SSBP4-204ENST00000597724 PLEKHB2Q96CS7 222 aa10.14□□□□□ -0.79
SSBP4-204ENST00000597724 HERVK_113P61574 105 aa10.13□□□□□ -0.79
SSBP4-204ENST00000597724 RPL24P83731 157 aaKnown RBP10.13□□□□□ -0.79
SSBP4-204ENST00000597724 MEIG1Q5JSS6 88 aa10.13□□□□□ -0.79
SSBP4-204ENST00000597724 Q8NDZ9 215 aa10.13□□□□□ -0.79
SSBP4-204ENST00000597724 TNXBP22105 4242 aa10.12□□□□□ -0.79
SSBP4-204ENST00000597724 LINC00587B1AMM8 73 aa10.12□□□□□ -0.79
SSBP4-204ENST00000597724 J3QQQ9 107 aa10.12□□□□□ -0.79
SSBP4-204ENST00000597724 ZNF861PO60384 105 aa10.12□□□□□ -0.79
SSBP4-204ENST00000597724 BCE1O60756 84 aa10.11□□□□□ -0.79
SSBP4-204ENST00000597724 ATP6V1G1O75348 118 aa10.11□□□□□ -0.79
SSBP4-204ENST00000597724 IGLV1-50A0A075B6I6 118 aa10.1□□□□□ -0.79
SSBP4-204ENST00000597724 PET117Q6UWS5 81 aa10.1□□□□□ -0.79
SSBP4-204ENST00000597724 MIR7-3HGQ8N6C7 128 aa10.1□□□□□ -0.79
SSBP4-204ENST00000597724 IGKV2-28A0A075B6P5 120 aa10.09□□□□□ -0.79
SSBP4-204ENST00000597724 IGKV2D-28P01615 120 aa10.09□□□□□ -0.79
SSBP4-204ENST00000597724 NMUP48645 174 aa10.09□□□□□ -0.79
SSBP4-204ENST00000597724 LINC01545Q5VT33 79 aa10.09□□□□□ -0.79
SSBP4-204ENST00000597724 C3orf79P0CE67 100 aa10.08□□□□□ -0.8
SSBP4-204ENST00000597724 LGALS3P17931 250 aaKnown RBP10.08□□□□□ -0.8
SSBP4-204ENST00000597724 E9PLD3 99 aa10.07□□□□□ -0.8
SSBP4-204ENST00000597724 KRTAP1-4P0C5Y4 121 aa10.07□□□□□ -0.8
SSBP4-204ENST00000597724 RPL28P46779 137 aaKnown RBP10.07□□□□□ -0.8
SSBP4-204ENST00000597724 BOD1L2Q8IYS8 172 aa10.06□□□□□ -0.8
SSBP4-204ENST00000597724 M0R378 163 aa10.05□□□□□ -0.8
SSBP4-204ENST00000597724 PRR26Q8N8Z3 221 aa10.05□□□□□ -0.8
SSBP4-204ENST00000597724 HMCN2Q8NDA2 5059 aa10.04□□□□□ -0.8
SSBP4-204ENST00000597724 KRTAP13-1Q8IUC0 172 aa10.04□□□□□ -0.8
SSBP4-204ENST00000597724 TMEM126AQ9H061 195 aa10.04□□□□□ -0.8
SSBP4-204ENST00000597724 LOC107984156A0A0G2JMH3 177 aa10.03□□□□□ -0.8
SSBP4-204ENST00000597724 TMEM238C9JI98 176 aa10.03□□□□□ -0.8
SSBP4-204ENST00000597724 KRTDAPP60985 99 aa10.03□□□□□ -0.8
SSBP4-204ENST00000597724 ARL17AQ8IVW1 177 aa10.03□□□□□ -0.8
SSBP4-204ENST00000597724 DAND5Q8N907 189 aa10.03□□□□□ -0.8
SSBP4-204ENST00000597724 IGKV2D-26A0A0A0MRZ7 120 aa10.01□□□□□ -0.81
SSBP4-204ENST00000597724 A0A0J9YXY3 114 aa10.01□□□□□ -0.81
SSBP4-204ENST00000597724 UBE2AP49459 152 aa10.01□□□□□ -0.81
SSBP4-204ENST00000597724 NCR3O14931 201 aa9.99□□□□□ -0.81
SSBP4-204ENST00000597724 FAM19A1Q7Z5A9 133 aa9.99□□□□□ -0.81
SSBP4-204ENST00000597724 PRLHP81277 87 aa9.98□□□□□ -0.81
SSBP4-204ENST00000597724 ADAMTSL4-AS1Q5T5F5 129 aa9.98□□□□□ -0.81
SSBP4-204ENST00000597724 C20orf202A1L168 122 aa9.97□□□□□ -0.81
SSBP4-204ENST00000597724 MIEN1Q9BRT3 115 aa9.97□□□□□ -0.81
SSBP4-204ENST00000597724 RPL13AP40429 203 aaKnown RBP9.96□□□□□ -0.82
SSBP4-204ENST00000597724 HIST3H2BBQ8N257 126 aa9.96□□□□□ -0.82
SSBP4-204ENST00000597724 TRBV10-3A0A0K0K1G6 114 aa9.95□□□□□ -0.82
SSBP4-204ENST00000597724 TRBV10-2A0A0K0K1G8 114 aa9.95□□□□□ -0.82
SSBP4-204ENST00000597724 PRYO14603 147 aa9.95□□□□□ -0.82
SSBP4-204ENST00000597724 KCNQ1DNQ9H478 68 aa9.95□□□□□ -0.82
SSBP4-204ENST00000597724 EIF4EBP3O60516 100 aaPredicted RBP9.94□□□□□ -0.82
SSBP4-204ENST00000597724 NDUFC2O95298 119 aa9.94□□□□□ -0.82
SSBP4-204ENST00000597724 SOSTDC1Q6X4U4 206 aa9.94□□□□□ -0.82
SSBP4-204ENST00000597724 LITAFQ99732 161 aa9.94□□□□□ -0.82
SSBP4-204ENST00000597724 TTTY13Q9BZ97 58 aa9.94□□□□□ -0.82
SSBP4-204ENST00000597724 ZNF815PA8K554 130 aa9.93□□□□□ -0.82
SSBP4-204ENST00000597724 TIMM17BO60830 172 aa9.93□□□□□ -0.82
SSBP4-204ENST00000597724 SPRR1AP35321 89 aa9.93□□□□□ -0.82
SSBP4-204ENST00000597724 ATOH7Q8N100 152 aa9.93□□□□□ -0.82
SSBP4-204ENST00000597724 HIST1H2BLQ99880 126 aa9.93□□□□□ -0.82
SSBP4-204ENST00000597724 A0A087X002 238 aa9.92□□□□□ -0.82
SSBP4-204ENST00000597724 S100A2P29034 98 aa9.92□□□□□ -0.82
SSBP4-204ENST00000597724 AKR1D1P51857 326 aa9.92□□□□□ -0.82
SSBP4-204ENST00000597724 NPC2P61916 151 aa9.92□□□□□ -0.82
SSBP4-204ENST00000597724 LINC00337Q8N6G1 96 aa9.92□□□□□ -0.82
SSBP4-204ENST00000597724 SPANXB1Q9NS25 103 aaPredicted RBP9.92□□□□□ -0.82
SSBP4-204ENST00000597724 ANAPC11Q9NYG5 84 aa9.92□□□□□ -0.82
SSBP4-204ENST00000597724 KRTAP4-16G5E9R7 235 aaPredicted RBP9.91□□□□□ -0.82
SSBP4-204ENST00000597724 CRYGAP11844 174 aa9.91□□□□□ -0.82
SSBP4-204ENST00000597724 DDTP30046 118 aa9.91□□□□□ -0.82
SSBP4-204ENST00000597724 ANKRD39Q53RE8 183 aa9.91□□□□□ -0.82
SSBP4-204ENST00000597724 S100A6P06703 90 aa9.9□□□□□ -0.82
SSBP4-204ENST00000597724 LINC00308Q8TCZ7 52 aa9.9□□□□□ -0.82
SSBP4-204ENST00000597724 HIGD2AQ9BW72 106 aa9.9□□□□□ -0.82
SSBP4-204ENST00000597724 S100A12P80511 92 aa9.89□□□□□ -0.83
SSBP4-204ENST00000597724 ETDCA0A1B0GVM5 59 aa9.88□□□□□ -0.83
SSBP4-204ENST00000597724 IGLV6-57P01721 117 aa9.88□□□□□ -0.83
SSBP4-204ENST00000597724 FAM229BQ4G0N7 80 aa9.88□□□□□ -0.83
SSBP4-204ENST00000597724 SNRPEP62304 92 aaKnown RBP9.87□□□□□ -0.83
SSBP4-204ENST00000597724 S100A7L2Q5SY68 101 aa9.87□□□□□ -0.83
SSBP4-204ENST00000597724 SCGB1D4Q6XE38 83 aa9.86□□□□□ -0.83
SSBP4-204ENST00000597724 SPANXCQ9NY87 97 aa9.86□□□□□ -0.83
SSBP4-204ENST00000597724 B5MCH6 92 aa9.85□□□□□ -0.83
SSBP4-204ENST00000597724 KRTAP13-2Q52LG2 175 aa9.85□□□□□ -0.83
SSBP4-204ENST00000597724 TYMSOSQ8TAI1 123 aa9.85□□□□□ -0.83
SSBP4-204ENST00000597724 PCP2Q8IVA1 136 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms