RNA–Protein interactions for RNA: ENST00000597466.1

SHD-203, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 2

Gene SHD, Length 289 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-203ENST00000597466 SND1-IT1Q9HBX3 110 aa6.18□□□□□ -1.42
SHD-203ENST00000597466 IGLV5-39A0A0G2JS06 123 aa6.17□□□□□ -1.42
SHD-203ENST00000597466 LINC01546A6NGU7 62 aa6.17□□□□□ -1.42
SHD-203ENST00000597466 ZNF625Q96I27 306 aaPredicted RBP6.17□□□□□ -1.42
SHD-203ENST00000597466 HIGD2AQ9BW72 106 aa6.17□□□□□ -1.42
SHD-203ENST00000597466 LINC01549A6NIU2 74 aa6.16□□□□□ -1.42
SHD-203ENST00000597466 LINC00614P0C842 121 aa6.16□□□□□ -1.42
SHD-203ENST00000597466 PMVKQ15126 192 aa6.16□□□□□ -1.42
SHD-203ENST00000597466 C18orf32Q8TCD1 76 aa6.16□□□□□ -1.42
SHD-203ENST00000597466 ERG28Q9UKR5 140 aa6.16□□□□□ -1.42
SHD-203ENST00000597466 ZNF22P17026 224 aaPredicted RBP6.15□□□□□ -1.42
SHD-203ENST00000597466 KRTAP13-3Q3SY46 172 aa6.15□□□□□ -1.42
SHD-203ENST00000597466 DAND5Q8N907 189 aa6.15□□□□□ -1.42
SHD-203ENST00000597466 SPRR4Q96PI1 79 aa6.15□□□□□ -1.42
SHD-203ENST00000597466 A0A096LNJ9 63 aa6.14□□□□□ -1.43
SHD-203ENST00000597466 H3BRM9 83 aa6.14□□□□□ -1.43
SHD-203ENST00000597466 IGLC3P0DOY3 106 aa6.14□□□□□ -1.43
SHD-203ENST00000597466 URB1-AS1Q96HZ7 61 aa6.14□□□□□ -1.43
SHD-203ENST00000597466 CTAG1AP78358 180 aa6.13□□□□□ -1.43
SHD-203ENST00000597466 COLCA2A8K830 154 aa6.12□□□□□ -1.43
SHD-203ENST00000597466 TRGC2P03986 189 aa6.12□□□□□ -1.43
SHD-203ENST00000597466 RPL24P83731 157 aaKnown RBP6.12□□□□□ -1.43
SHD-203ENST00000597466 ASB16-AS1Q495Z4 193 aa6.12□□□□□ -1.43
SHD-203ENST00000597466 FP248Q71RG6 208 aaPredicted RBP6.12□□□□□ -1.43
SHD-203ENST00000597466 Q8NBF4 154 aa6.12□□□□□ -1.43
SHD-203ENST00000597466 A0A0U1RRA0 63 aa6.11□□□□□ -1.43
SHD-203ENST00000597466 HBDP02042 147 aa6.11□□□□□ -1.43
SHD-203ENST00000597466 NDUFA6P56556 154 aa6.11□□□□□ -1.43
SHD-203ENST00000597466 SPAG11AQ6PDA7 123 aa6.11□□□□□ -1.43
SHD-203ENST00000597466 C11orf86A6NJI1 115 aa6.1□□□□□ -1.43
SHD-203ENST00000597466 COX17Q14061 63 aa6.1□□□□□ -1.43
SHD-203ENST00000597466 PMCHL1Q16048 86 aa6.1□□□□□ -1.43
SHD-203ENST00000597466 LCE2DQ5TA82 110 aaPredicted RBP6.1□□□□□ -1.43
SHD-203ENST00000597466 BAGE3Q86Y29 109 aa6.1□□□□□ -1.43
SHD-203ENST00000597466 LINC00337Q8N6G1 96 aa6.1□□□□□ -1.43
SHD-203ENST00000597466 CHCHD1Q96BP2 118 aaKnown RBP6.1□□□□□ -1.43
SHD-203ENST00000597466 LINC01547P58512 204 aaPredicted RBP6.08□□□□□ -1.44
SHD-203ENST00000597466 LINC00158P58513 81 aa6.08□□□□□ -1.44
SHD-203ENST00000597466 C4orf48Q5BLP8 95 aa6.08□□□□□ -1.44
SHD-203ENST00000597466 NCR3O14931 201 aa6.07□□□□□ -1.44
SHD-203ENST00000597466 HSBP1O75506 76 aa6.07□□□□□ -1.44
SHD-203ENST00000597466 TMEM170BQ5T4T1 132 aa6.07□□□□□ -1.44
SHD-203ENST00000597466 SMCR5Q8TEV8 140 aa6.07□□□□□ -1.44
SHD-203ENST00000597466 KRTAP4-16G5E9R7 235 aaPredicted RBP6.06□□□□□ -1.44
SHD-203ENST00000597466 FAM19A2Q8N3H0 131 aa6.06□□□□□ -1.44
SHD-203ENST00000597466 CRCT1Q9UGL9 99 aa6.06□□□□□ -1.44
SHD-203ENST00000597466 ZNF706Q9Y5V0 76 aaPredicted RBP6.06□□□□□ -1.44
SHD-203ENST00000597466 PRYO14603 147 aa6.05□□□□□ -1.44
SHD-203ENST00000597466 SPRR1AP35321 89 aa6.05□□□□□ -1.44
SHD-203ENST00000597466 LCE2CQ5TA81 110 aa6.05□□□□□ -1.44
SHD-203ENST00000597466 IFI27L1Q96BM0 104 aa6.05□□□□□ -1.44
SHD-203ENST00000597466 IGLV9-49A0A0B4J1Y8 123 aa6.04□□□□□ -1.44
SHD-203ENST00000597466 SERF1AO75920 110 aa6.04□□□□□ -1.44
SHD-203ENST00000597466 ERC2-IT1O76042 136 aa6.04□□□□□ -1.44
SHD-203ENST00000597466 SPINK1P00995 79 aa6.04□□□□□ -1.44
SHD-203ENST00000597466 SMIM13P0DJ93 91 aa6.04□□□□□ -1.44
SHD-203ENST00000597466 SEC61BP60468 96 aaKnown RBP6.04□□□□□ -1.44
SHD-203ENST00000597466 MOBPQ13875 183 aa6.04□□□□□ -1.44
SHD-203ENST00000597466 LINC00483Q53H64 154 aa6.04□□□□□ -1.44
SHD-203ENST00000597466 BOD1L2Q8IYS8 172 aa6.04□□□□□ -1.44
SHD-203ENST00000597466 Q8N377 158 aa6.04□□□□□ -1.44
SHD-203ENST00000597466 GAGE2AQ6NT46 116 aa6.03□□□□□ -1.44
SHD-203ENST00000597466 KCNQ1DNQ9H478 68 aa6.03□□□□□ -1.44
SHD-203ENST00000597466 TRAV12-1A0A0B4J245 112 aa6.02□□□□□ -1.45
SHD-203ENST00000597466 TRBV10-3A0A0K0K1G6 114 aa6.02□□□□□ -1.45
SHD-203ENST00000597466 ETDCA0A1B0GVM5 59 aa6.02□□□□□ -1.45
SHD-203ENST00000597466 TMEM223A0PJW6 202 aa6.02□□□□□ -1.45
SHD-203ENST00000597466 LEPROTL1O95214 131 aa6.02□□□□□ -1.45
SHD-203ENST00000597466 LINC00310P59036 64 aa6.02□□□□□ -1.45
SHD-203ENST00000597466 KRTAP19-2Q3LHN2 52 aa6.02□□□□□ -1.45
SHD-203ENST00000597466 SFTA2Q6UW10 78 aa6.02□□□□□ -1.45
SHD-203ENST00000597466 MIR7-3HGQ8N6C7 128 aa6.02□□□□□ -1.45
SHD-203ENST00000597466 CHTOPQ9Y3Y2 248 aaKnown RBP6.02□□□□□ -1.45
SHD-203ENST00000597466 HIST1H2BKO60814 126 aa6.01□□□□□ -1.45
SHD-203ENST00000597466 HIST1H2BJP06899 126 aa6.01□□□□□ -1.45
SHD-203ENST00000597466 S100A1P23297 94 aa6.01□□□□□ -1.45
SHD-203ENST00000597466 HIST1H2BOP23527 126 aa6.01□□□□□ -1.45
SHD-203ENST00000597466 HIST1H2BBP33778 126 aa6.01□□□□□ -1.45
SHD-203ENST00000597466 HIST1H2BDP58876 126 aa6.01□□□□□ -1.45
SHD-203ENST00000597466 HIST1H2BCP62807 126 aa6.01□□□□□ -1.45
SHD-203ENST00000597466 HIST2H2BEQ16778 126 aa6.01□□□□□ -1.45
SHD-203ENST00000597466 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.01□□□□□ -1.45
SHD-203ENST00000597466 XP32Q5T750 250 aa6.01□□□□□ -1.45
SHD-203ENST00000597466 HIST1H2BHQ93079 126 aa6.01□□□□□ -1.45
SHD-203ENST00000597466 HIST1H2BNQ99877 126 aa6.01□□□□□ -1.45
SHD-203ENST00000597466 HIST1H2BMQ99879 126 aa6.01□□□□□ -1.45
SHD-203ENST00000597466 B5MCH6 92 aa6□□□□□ -1.45
SHD-203ENST00000597466 FABP4P15090 132 aa6□□□□□ -1.45
SHD-203ENST00000597466 MEIG1Q5JSS6 88 aa6□□□□□ -1.45
SHD-203ENST00000597466 Q9BRP9 147 aa6□□□□□ -1.45
SHD-203ENST00000597466 HSPB8Q9UJY1 196 aa6□□□□□ -1.45
SHD-203ENST00000597466 H0Y8G0 127 aa5.98□□□□□ -1.45
SHD-203ENST00000597466 ATP6V1G1O75348 118 aa5.98□□□□□ -1.45
SHD-203ENST00000597466 NDUFA12Q9UI09 145 aa5.98□□□□□ -1.45
SHD-203ENST00000597466 TSPEAR-AS2P59090 65 aa5.97□□□□□ -1.45
SHD-203ENST00000597466 RPS29P62273 56 aaKnown RBP5.97□□□□□ -1.45
SHD-203ENST00000597466 MT1HP80294 61 aa5.97□□□□□ -1.45
SHD-203ENST00000597466 SLC25A20O43772 301 aa5.96□□□□□ -1.46
SHD-203ENST00000597466 SSBP3-AS1Q7Z2R9 100 aa5.96□□□□□ -1.46
SHD-203ENST00000597466 MAP1LC3CQ9BXW4 147 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms