RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 LINC00308Q8TCZ7 52 aa13.28□□□□□ -0.28
IRF3-214ENST00000596788 SPACA4Q8TDM5 124 aa13.28□□□□□ -0.28
IRF3-214ENST00000596788 SRSF9Q13242 221 aaKnown RBP eCLIP13.26□□□□□ -0.29
IRF3-214ENST00000596788 Q6ZVH6 145 aa13.26□□□□□ -0.29
IRF3-214ENST00000596788 Q8NDZ9 215 aa13.26□□□□□ -0.29
IRF3-214ENST00000596788 DNAH8Q96JB1 4490 aa13.26□□□□□ -0.29
IRF3-214ENST00000596788 LOC107984156A0A0G2JMH3 177 aa13.25□□□□□ -0.29
IRF3-214ENST00000596788 FAM168BA1KXE4 195 aa13.25□□□□□ -0.29
IRF3-214ENST00000596788 ARL17AQ8IVW1 177 aa13.25□□□□□ -0.29
IRF3-214ENST00000596788 HIST1H4GQ99525 98 aa13.25□□□□□ -0.29
IRF3-214ENST00000596788 FAM30AQ9NZY2 134 aa13.25□□□□□ -0.29
IRF3-214ENST00000596788 LINC00474Q9P2X8 69 aa13.25□□□□□ -0.29
IRF3-214ENST00000596788 Q6ZSA8 131 aa13.24□□□□□ -0.29
IRF3-214ENST00000596788 IFITM1P13164 125 aa13.23□□□□□ -0.29
IRF3-214ENST00000596788 SERTAD4-AS1Q5TG53 156 aa13.23□□□□□ -0.29
IRF3-214ENST00000596788 KRTAP7-1Q8IUC3 87 aa13.23□□□□□ -0.29
IRF3-214ENST00000596788 MUSTN1Q8IVN3 82 aa13.23□□□□□ -0.29
IRF3-214ENST00000596788 LRP1BQ9NZR2 4599 aa13.22□□□□□ -0.29
IRF3-214ENST00000596788 A0A1W2PNN7 141 aa13.21□□□□□ -0.29
IRF3-214ENST00000596788 HSD52Q0P140 79 aa13.21□□□□□ -0.29
IRF3-214ENST00000596788 TAL2Q16559 108 aa13.21□□□□□ -0.29
IRF3-214ENST00000596788 FAM19A5Q7Z5A7 132 aaPredicted RBP13.21□□□□□ -0.29
IRF3-214ENST00000596788 PPDPFQ9H3Y8 114 aa13.21□□□□□ -0.29
IRF3-214ENST00000596788 PLA2G2DQ9UNK4 145 aa13.21□□□□□ -0.29
IRF3-214ENST00000596788 VPREB1P12018 145 aa13.2□□□□□ -0.3
IRF3-214ENST00000596788 COPS9Q8WXC6 57 aa13.19□□□□□ -0.3
IRF3-214ENST00000596788 A0A087WYN8 130 aa13.18□□□□□ -0.3
IRF3-214ENST00000596788 DDTP30046 118 aa13.18□□□□□ -0.3
IRF3-214ENST00000596788 CTAG1AP78358 180 aa13.17□□□□□ -0.3
IRF3-214ENST00000596788 CEND1Q8N111 149 aa13.17□□□□□ -0.3
IRF3-214ENST00000596788 DPH3Q96FX2 82 aa13.17□□□□□ -0.3
IRF3-214ENST00000596788 IGLV5-37A0A075B6J1 123 aa13.16□□□□□ -0.3
IRF3-214ENST00000596788 NDUFC2O95298 119 aa13.16□□□□□ -0.3
IRF3-214ENST00000596788 PRR3P79522 188 aaKnown RBP13.16□□□□□ -0.3
IRF3-214ENST00000596788 HAMPP81172 84 aa13.16□□□□□ -0.3
IRF3-214ENST00000596788 PLAC8Q9NZF1 115 aa13.16□□□□□ -0.3
IRF3-214ENST00000596788 A4D1N5 150 aa13.15□□□□□ -0.3
IRF3-214ENST00000596788 EPM2AB3EWF7 344 aa13.15□□□□□ -0.3
IRF3-214ENST00000596788 NCR3O14931 201 aa13.15□□□□□ -0.3
IRF3-214ENST00000596788 RPL24P83731 157 aaKnown RBP13.15□□□□□ -0.3
IRF3-214ENST00000596788 SCXQ7RTU7 201 aa13.15□□□□□ -0.3
IRF3-214ENST00000596788 M0QXV9 152 aa13.14□□□□□ -0.31
IRF3-214ENST00000596788 FXYD2P54710 66 aa13.14□□□□□ -0.31
IRF3-214ENST00000596788 CIRBP-AS1Q8TBR5 109 aa13.14□□□□□ -0.31
IRF3-214ENST00000596788 EPPK1P58107 5090 aaKnown RBP13.13□□□□□ -0.31
IRF3-214ENST00000596788 NKAPP1Q8N9T2 125 aa13.13□□□□□ -0.31
IRF3-214ENST00000596788 IGKV2-28A0A075B6P5 120 aa13.12□□□□□ -0.31
IRF3-214ENST00000596788 IGKV2D-28P01615 120 aa13.12□□□□□ -0.31
IRF3-214ENST00000596788 C22orf24Q9Y442 160 aa13.12□□□□□ -0.31
IRF3-214ENST00000596788 PHF5AQ7RTV0 110 aaKnown RBP13.1□□□□□ -0.31
IRF3-214ENST00000596788 C7orf33Q8WU49 177 aa13.1□□□□□ -0.31
IRF3-214ENST00000596788 APOBP04114 4563 aaKnown RBP13.1□□□□□ -0.31
IRF3-214ENST00000596788 TRBV10-2A0A0K0K1G8 114 aa13.09□□□□□ -0.31
IRF3-214ENST00000596788 MRPL55Q7Z7F7 128 aaKnown RBP13.09□□□□□ -0.31
IRF3-214ENST00000596788 GAGE10A6NGK3 116 aa13.08□□□□□ -0.32
IRF3-214ENST00000596788 PCP4L1A6NKN8 68 aa13.08□□□□□ -0.32
IRF3-214ENST00000596788 M0R378 163 aa13.08□□□□□ -0.32
IRF3-214ENST00000596788 HINT1P49773 126 aaPredicted RBP13.08□□□□□ -0.32
IRF3-214ENST00000596788 BVES-AS1Q5T3Y7 98 aa13.08□□□□□ -0.32
IRF3-214ENST00000596788 LINC00337Q8N6G1 96 aa13.08□□□□□ -0.32
IRF3-214ENST00000596788 XGP55808 180 aa13.07□□□□□ -0.32
IRF3-214ENST00000596788 TMEM238LA0A1B0GVL6 79 aa13.06□□□□□ -0.32
IRF3-214ENST00000596788 A6NJY4 79 aa13.06□□□□□ -0.32
IRF3-214ENST00000596788 M0R143 59 aa13.06□□□□□ -0.32
IRF3-214ENST00000596788 LINC00167Q96N53 147 aa13.06□□□□□ -0.32
IRF3-214ENST00000596788 CFC1BP0CG36 223 aa13.04□□□□□ -0.32
IRF3-214ENST00000596788 CFC1P0CG37 223 aa13.04□□□□□ -0.32
IRF3-214ENST00000596788 TRBV10-3A0A0K0K1G6 114 aa13.03□□□□□ -0.32
IRF3-214ENST00000596788 LBHQ53QV2 105 aaPredicted RBP13.03□□□□□ -0.32
IRF3-214ENST00000596788 NHP2Q9NX24 153 aaKnown RBP13.03□□□□□ -0.32
IRF3-214ENST00000596788 A0A0B4J2C4 111 aa13.02□□□□□ -0.33
IRF3-214ENST00000596788 RPL37AP8A6NKH3 93 aa13.02□□□□□ -0.33
IRF3-214ENST00000596788 IGLV6-57P01721 117 aa13.02□□□□□ -0.33
IRF3-214ENST00000596788 KRTAP11-1Q8IUC1 163 aa13.02□□□□□ -0.33
IRF3-214ENST00000596788 K7ERJ3 54 aa13.01□□□□□ -0.33
IRF3-214ENST00000596788 S100A7L2Q5SY68 101 aa13.01□□□□□ -0.33
IRF3-214ENST00000596788 OR13C6PQ8NH95 151 aa13.01□□□□□ -0.33
IRF3-214ENST00000596788 IGLV1-50A0A075B6I6 118 aa13□□□□□ -0.33
IRF3-214ENST00000596788 TRAV13-2A0A0B4J235 113 aa13□□□□□ -0.33
IRF3-214ENST00000596788 A0A1B0GWB2 263 aa13□□□□□ -0.33
IRF3-214ENST00000596788 A6NDN8 102 aa13□□□□□ -0.33
IRF3-214ENST00000596788 UBE2BP63146 152 aa13□□□□□ -0.33
IRF3-214ENST00000596788 CDK2AP2O75956 126 aa12.99□□□□□ -0.33
IRF3-214ENST00000596788 RAB37Q96AX2 223 aa12.99□□□□□ -0.33
IRF3-214ENST00000596788 RPL13AP40429 203 aaKnown RBP12.98□□□□□ -0.33
IRF3-214ENST00000596788 BATFQ16520 125 aa12.98□□□□□ -0.33
IRF3-214ENST00000596788 TMEM126AQ9H061 195 aa12.97□□□□□ -0.33
IRF3-214ENST00000596788 TRAV23DV6A0A075B6W5 121 aa12.94□□□□□ -0.34
IRF3-214ENST00000596788 PRYO14603 147 aa12.94□□□□□ -0.34
IRF3-214ENST00000596788 SNHG12Q9BXW3 62 aa12.94□□□□□ -0.34
IRF3-214ENST00000596788 KCNQ1DNQ9H478 68 aa12.94□□□□□ -0.34
IRF3-214ENST00000596788 PRO1854Q9UHT4 67 aa12.94□□□□□ -0.34
IRF3-214ENST00000596788 H7C2G1 150 aa12.92□□□□□ -0.34
IRF3-214ENST00000596788 SMR3BP02814 79 aaPredicted RBP12.92□□□□□ -0.34
IRF3-214ENST00000596788 HSPG2P98160 4391 aa12.91□□□□□ -0.34
IRF3-214ENST00000596788 SMIM11BQ8TCY0 68 aa12.91□□□□□ -0.34
IRF3-214ENST00000596788 PSORS1C2Q9UIG4 136 aa12.91□□□□□ -0.34
IRF3-214ENST00000596788 RYR1P21817 5038 aa12.91□□□□□ -0.34
IRF3-214ENST00000596788 REG3GQ6UW15 175 aa12.9□□□□□ -0.34
IRF3-214ENST00000596788 LINC00528Q8N1L1 170 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms