RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 KRTAP10-11P60412 298 aa11.8□□□□□ -0.52
SHKBP1-205ENST00000594973 SMIM11BQ8TCY0 68 aa11.8□□□□□ -0.52
SHKBP1-205ENST00000594973 SERP1Q9Y6X1 66 aa11.79□□□□□ -0.52
SHKBP1-205ENST00000594973 FAM236DA0A1B0GTK5 79 aa11.78□□□□□ -0.52
SHKBP1-205ENST00000594973 FAM236CP0DP71 79 aa11.78□□□□□ -0.52
SHKBP1-205ENST00000594973 IGKV2-28A0A075B6P5 120 aa11.78□□□□□ -0.52
SHKBP1-205ENST00000594973 TRBV10-3A0A0K0K1G6 114 aa11.78□□□□□ -0.52
SHKBP1-205ENST00000594973 IGKV2D-28P01615 120 aa11.78□□□□□ -0.52
SHKBP1-205ENST00000594973 HTN3P15516 51 aa11.78□□□□□ -0.52
SHKBP1-205ENST00000594973 BCE1O60756 84 aa11.77□□□□□ -0.52
SHKBP1-205ENST00000594973 LYPD5Q6UWN5 251 aa11.77□□□□□ -0.53
SHKBP1-205ENST00000594973 SND1-IT1Q9HBX3 110 aa11.77□□□□□ -0.53
SHKBP1-205ENST00000594973 SPART-AS1P0CW21 52 aa11.76□□□□□ -0.53
SHKBP1-205ENST00000594973 NCR3O14931 201 aa11.75□□□□□ -0.53
SHKBP1-205ENST00000594973 NOTCH1P46531 2555 aa11.75□□□□□ -0.53
SHKBP1-205ENST00000594973 LECT2O14960 151 aa11.74□□□□□ -0.53
SHKBP1-205ENST00000594973 XCL1P47992 114 aa11.74□□□□□ -0.53
SHKBP1-205ENST00000594973 RETNQ9HD89 108 aa11.74□□□□□ -0.53
SHKBP1-205ENST00000594973 CLPSL2Q6UWE3 100 aa11.74□□□□□ -0.53
SHKBP1-205ENST00000594973 ORMDL1Q9P0S3 153 aa11.74□□□□□ -0.53
SHKBP1-205ENST00000594973 JMJD7-PLA2G4BH0Y9G9 81 aa11.73□□□□□ -0.53
SHKBP1-205ENST00000594973 MIR7-3HGQ8N6C7 128 aa11.73□□□□□ -0.53
SHKBP1-205ENST00000594973 C20orf197Q8N268 126 aa11.72□□□□□ -0.53
SHKBP1-205ENST00000594973 TOMM7Q9P0U1 55 aa11.72□□□□□ -0.53
SHKBP1-205ENST00000594973 TRAV23DV6A0A075B6W5 121 aa11.71□□□□□ -0.54
SHKBP1-205ENST00000594973 LINC00959A0A1B0GUT2 108 aa11.7□□□□□ -0.54
SHKBP1-205ENST00000594973 SS18Q15532 418 aa11.7□□□□□ -0.54
SHKBP1-205ENST00000594973 H7BZZ5 65 aa11.7□□□□□ -0.54
SHKBP1-205ENST00000594973 LINC00336Q6ZUF6 198 aa11.7□□□□□ -0.54
SHKBP1-205ENST00000594973 Q8N3U1 123 aa11.7□□□□□ -0.54
SHKBP1-205ENST00000594973 LINC00167Q96N53 147 aa11.7□□□□□ -0.54
SHKBP1-205ENST00000594973 IGHV3OR16-9A0A0B4J2B5 98 aa11.69□□□□□ -0.54
SHKBP1-205ENST00000594973 A0A1B0GUV1 79 aa11.69□□□□□ -0.54
SHKBP1-205ENST00000594973 TENM3Q9P273 2699 aa11.68□□□□□ -0.54
SHKBP1-205ENST00000594973 TRAV7A0A075B6U4 112 aa11.68□□□□□ -0.54
SHKBP1-205ENST00000594973 EGFEM1PQ0D2K5 195 aa11.68□□□□□ -0.54
SHKBP1-205ENST00000594973 COX7B2Q8TF08 81 aa11.68□□□□□ -0.54
SHKBP1-205ENST00000594973 SMIM26A0A096LP01 95 aa11.68□□□□□ -0.54
SHKBP1-205ENST00000594973 CCL18P55774 89 aa11.68□□□□□ -0.54
SHKBP1-205ENST00000594973 NBEAL1Q6ZS30 2694 aa11.67□□□□□ -0.54
SHKBP1-205ENST00000594973 ENHOQ6UWT2 76 aa11.67□□□□□ -0.54
SHKBP1-205ENST00000594973 FAM19A1Q7Z5A9 133 aa11.67□□□□□ -0.54
SHKBP1-205ENST00000594973 F8WDY8 70 aa11.66□□□□□ -0.54
SHKBP1-205ENST00000594973 LINC00269Q8N2A0 174 aa11.66□□□□□ -0.54
SHKBP1-205ENST00000594973 A0A087WZ39 114 aa11.66□□□□□ -0.54
SHKBP1-205ENST00000594973 KLKP1Q107X0 134 aa11.66□□□□□ -0.54
SHKBP1-205ENST00000594973 UBL5Q9BZL1 73 aa11.66□□□□□ -0.54
SHKBP1-205ENST00000594973 IBA57-AS1B1ANH7 110 aa11.65□□□□□ -0.54
SHKBP1-205ENST00000594973 LINC00158P58513 81 aa11.65□□□□□ -0.54
SHKBP1-205ENST00000594973 DNAH3Q8TD57 4116 aa11.65□□□□□ -0.54
SHKBP1-205ENST00000594973 SLPIP03973 132 aa11.65□□□□□ -0.54
SHKBP1-205ENST00000594973 ANGP03950 147 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-205ENST00000594973 C11orf68Q9H3H3 251 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-205ENST00000594973 IGLV10-54A0A075B6I4 117 aa11.63□□□□□ -0.55
SHKBP1-205ENST00000594973 TMEM256-PLSCR3K7ERE1 68 aa11.63□□□□□ -0.55
SHKBP1-205ENST00000594973 C1orf43Q9BWL3 253 aa11.62□□□□□ -0.55
SHKBP1-205ENST00000594973 REG3AQ06141 175 aa11.6□□□□□ -0.55
SHKBP1-205ENST00000594973 PRB2P02812 416 aaPredicted RBP11.6□□□□□ -0.55
SHKBP1-205ENST00000594973 Q6ZTC4 211 aa11.6□□□□□ -0.55
SHKBP1-205ENST00000594973 C6orf226Q5I0X4 101 aa11.59□□□□□ -0.55
SHKBP1-205ENST00000594973 LELP1Q5T871 98 aa11.59□□□□□ -0.55
SHKBP1-205ENST00000594973 FP248Q71RG6 208 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-205ENST00000594973 Q8N814 137 aa11.58□□□□□ -0.56
SHKBP1-205ENST00000594973 CHCHD10Q8WYQ3 142 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-205ENST00000594973 NDUFC1O43677 76 aa11.58□□□□□ -0.56
SHKBP1-205ENST00000594973 ATP5EP56381 51 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-205ENST00000594973 A0A0J9YWU9 116 aa11.57□□□□□ -0.56
SHKBP1-205ENST00000594973 MGAM2Q2M2H8 2515 aa11.56□□□□□ -0.56
SHKBP1-205ENST00000594973 CD164L2Q6UWJ8 174 aa11.55□□□□□ -0.56
SHKBP1-205ENST00000594973 KPRPQ5T749 579 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-205ENST00000594973 NANOS2P60321 138 aaKnown RBP11.54□□□□□ -0.56
SHKBP1-205ENST00000594973 KLK12Q9UKR0 248 aa11.54□□□□□ -0.56
SHKBP1-205ENST00000594973 Q8IZM0 81 aa11.52□□□□□ -0.57
SHKBP1-205ENST00000594973 LOC110117498A0A087WWA1 95 aa11.52□□□□□ -0.57
SHKBP1-205ENST00000594973 F8WEM9 126 aa11.52□□□□□ -0.57
SHKBP1-205ENST00000594973 TRBV7-6A0A0J9YX20 115 aa11.51□□□□□ -0.57
SHKBP1-205ENST00000594973 LINC01547P58512 204 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-205ENST00000594973 Q6ZQT0 140 aa11.51□□□□□ -0.57
SHKBP1-205ENST00000594973 C11orf45Q8TAV5 145 aa11.51□□□□□ -0.57
SHKBP1-205ENST00000594973 PKIGQ9Y2B9 76 aa11.51□□□□□ -0.57
SHKBP1-205ENST00000594973 RMI2Q96E14 147 aa11.5□□□□□ -0.57
SHKBP1-205ENST00000594973 CXCL6P80162 114 aa11.49□□□□□ -0.57
SHKBP1-205ENST00000594973 WFDC10BQ8IUB3 73 aa11.49□□□□□ -0.57
SHKBP1-205ENST00000594973 DEFB131BA0A096LNP1 70 aa11.48□□□□□ -0.57
SHKBP1-205ENST00000594973 H3BNG1 76 aa11.48□□□□□ -0.57
SHKBP1-205ENST00000594973 SNURFQ9Y675 71 aa11.48□□□□□ -0.57
SHKBP1-205ENST00000594973 RBM3P98179 157 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-205ENST00000594973 KIAA0087Q14695 138 aa11.48□□□□□ -0.57
SHKBP1-205ENST00000594973 TRAV10A0A0B4J240 114 aa11.47□□□□□ -0.57
SHKBP1-205ENST00000594973 PRR34Q9NV39 138 aa11.47□□□□□ -0.57
SHKBP1-205ENST00000594973 ZNF561-AS1K7EIQ3 104 aa11.46□□□□□ -0.58
SHKBP1-205ENST00000594973 PDE6GP18545 87 aa11.45□□□□□ -0.58
SHKBP1-205ENST00000594973 ESRGQ1W209 222 aa11.45□□□□□ -0.58
SHKBP1-205ENST00000594973 Q6ZVQ6 151 aa11.45□□□□□ -0.58
SHKBP1-205ENST00000594973 C6orf223Q8N319 242 aa11.45□□□□□ -0.58
SHKBP1-205ENST00000594973 C9orf116Q5BN46 136 aaPredicted RBP11.44□□□□□ -0.58
SHKBP1-205ENST00000594973 K7EIL1 84 aa11.44□□□□□ -0.58
SHKBP1-205ENST00000594973 V9GYY9 64 aa11.44□□□□□ -0.58
SHKBP1-205ENST00000594973 TRBV7-4A0A0J9YYF1 115 aa11.43□□□□□ -0.58
SHKBP1-205ENST00000594973 C1orf195Q5TG92 126 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms