RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 Q8N3U1 123 aa8.94□□□□□ -0.98
VRK3-209ENST00000594948 LAMTOR3Q9UHA4 124 aa8.94□□□□□ -0.98
VRK3-209ENST00000594948 TRBV7-6A0A0J9YX20 115 aa8.94□□□□□ -0.98
VRK3-209ENST00000594948 DSCR8Q96T75 97 aa8.94□□□□□ -0.98
VRK3-209ENST00000594948 TRAV7A0A075B6U4 112 aa8.93□□□□□ -0.98
VRK3-209ENST00000594948 CXCL6P80162 114 aa8.93□□□□□ -0.98
VRK3-209ENST00000594948 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.93□□□□□ -0.98
VRK3-209ENST00000594948 WFDC9Q8NEX5 89 aa8.93□□□□□ -0.98
VRK3-209ENST00000594948 DEFB135Q30KP9 77 aa8.92□□□□□ -0.98
VRK3-209ENST00000594948 DIRC1Q969H9 104 aa8.92□□□□□ -0.98
VRK3-209ENST00000594948 FLNAP21333 2647 aaKnown RBP8.92□□□□□ -0.98
VRK3-209ENST00000594948 LINC01547P58512 204 aaPredicted RBP8.91□□□□□ -0.98
VRK3-209ENST00000594948 Q6ZQY7 126 aa8.91□□□□□ -0.98
VRK3-209ENST00000594948 Q6ZVQ6 151 aa8.91□□□□□ -0.98
VRK3-209ENST00000594948 Q8NAQ8 132 aa8.91□□□□□ -0.98
VRK3-209ENST00000594948 C5orf47Q569G3 176 aa8.91□□□□□ -0.98
VRK3-209ENST00000594948 ZNF469Q96JG9 3925 aaPredicted RBP8.91□□□□□ -0.98
VRK3-209ENST00000594948 SPART-AS1P0CW21 52 aa8.9□□□□□ -0.98
VRK3-209ENST00000594948 ZFYVE26Q68DK2 2539 aa8.9□□□□□ -0.98
VRK3-209ENST00000594948 C6orf48Q9UBA6 75 aa8.89□□□□□ -0.99
VRK3-209ENST00000594948 CELA1Q9UNI1 258 aa8.89□□□□□ -0.99
VRK3-209ENST00000594948 NF1P21359 2839 aa8.89□□□□□ -0.99
VRK3-209ENST00000594948 TRBV7-4A0A0J9YYF1 115 aa8.89□□□□□ -0.99
VRK3-209ENST00000594948 COX7BP24311 80 aa8.89□□□□□ -0.99
VRK3-209ENST00000594948 NBPF19A0A087WUL8 3843 aa8.88□□□□□ -0.99
VRK3-209ENST00000594948 DEFB4AO15263 64 aa8.88□□□□□ -0.99
VRK3-209ENST00000594948 ELOF1P60002 83 aaKnown RBP8.88□□□□□ -0.99
VRK3-209ENST00000594948 KLK12Q9UKR0 248 aa8.88□□□□□ -0.99
VRK3-209ENST00000594948 M0R2N4 97 aa8.87□□□□□ -0.99
VRK3-209ENST00000594948 ZNF73O43830 326 aaPredicted RBP8.87□□□□□ -0.99
VRK3-209ENST00000594948 ANK3Q12955 4377 aaKnown RBP8.87□□□□□ -0.99
VRK3-209ENST00000594948 HAMPP81172 84 aa8.86□□□□□ -0.99
VRK3-209ENST00000594948 C20orf197Q8N268 126 aa8.86□□□□□ -0.99
VRK3-209ENST00000594948 SPATA3Q8NHX4 192 aa8.86□□□□□ -0.99
VRK3-209ENST00000594948 KMT2BQ9UMN6 2715 aaPredicted RBP8.86□□□□□ -0.99
VRK3-209ENST00000594948 OXTP01178 125 aa8.85□□□□□ -0.99
VRK3-209ENST00000594948 KLKP1Q107X0 134 aa8.85□□□□□ -0.99
VRK3-209ENST00000594948 FAM236DA0A1B0GTK5 79 aa8.84□□□□□ -0.99
VRK3-209ENST00000594948 FAM236CP0DP71 79 aa8.84□□□□□ -0.99
VRK3-209ENST00000594948 VPREB1P12018 145 aa8.84□□□□□ -0.99
VRK3-209ENST00000594948 EGFEM1PQ0D2K5 195 aa8.84□□□□□ -0.99
VRK3-209ENST00000594948 FN1P02751 2386 aaKnown RBP8.84□□□□□ -0.99
VRK3-209ENST00000594948 M0R378 163 aa8.84□□□□□ -0.99
VRK3-209ENST00000594948 EPM2AB3EWF7 344 aa8.82□□□□□ -1
VRK3-209ENST00000594948 F8WDY8 70 aa8.82□□□□□ -1
VRK3-209ENST00000594948 H3BNG1 76 aa8.82□□□□□ -1
VRK3-209ENST00000594948 PDZD2O15018 2839 aa8.82□□□□□ -1
VRK3-209ENST00000594948 H7BZZ5 65 aa8.82□□□□□ -1
VRK3-209ENST00000594948 HTN3P15516 51 aa8.82□□□□□ -1
VRK3-209ENST00000594948 XAGE1AQ9HD64 81 aa8.82□□□□□ -1
VRK3-209ENST00000594948 NIPBLQ6KC79 2804 aaeCLIP8.82□□□□□ -1
VRK3-209ENST00000594948 CCDC168Q8NDH2 2452 aa8.81□□□□□ -1
VRK3-209ENST00000594948 LINC00528Q8N1L1 170 aa8.81□□□□□ -1
VRK3-209ENST00000594948 CAMK2N2Q96S95 79 aa8.81□□□□□ -1
VRK3-209ENST00000594948 TRAV10A0A0B4J240 114 aa8.8□□□□□ -1
VRK3-209ENST00000594948 KRTAP26-1Q6PEX3 210 aa8.8□□□□□ -1
VRK3-209ENST00000594948 SERP1Q9Y6X1 66 aa8.8□□□□□ -1
VRK3-209ENST00000594948 SETD2Q9BYW2 2564 aaPredicted RBP8.8□□□□□ -1
VRK3-209ENST00000594948 WIPF1O43516 503 aa8.79□□□□□ -1
VRK3-209ENST00000594948 NDUFC1O43677 76 aa8.79□□□□□ -1
VRK3-209ENST00000594948 Q5XG85 94 aa8.79□□□□□ -1
VRK3-209ENST00000594948 CUBNO60494 3623 aa8.78□□□□□ -1
VRK3-209ENST00000594948 GCN1Q92616 2671 aaKnown RBP8.78□□□□□ -1
VRK3-209ENST00000594948 ERC2-IT1O76042 136 aa8.77□□□□□ -1.01
VRK3-209ENST00000594948 Q6ZRU5 148 aa8.76□□□□□ -1.01
VRK3-209ENST00000594948 C15orf56Q8N910 161 aa8.76□□□□□ -1.01
VRK3-209ENST00000594948 ATP5EP56381 51 aaPredicted RBP8.75□□□□□ -1.01
VRK3-209ENST00000594948 HIGD2BQ4VC39 106 aa8.75□□□□□ -1.01
VRK3-209ENST00000594948 SMR3AQ99954 134 aa8.75□□□□□ -1.01
VRK3-209ENST00000594948 ACANP16112 2415 aa8.74□□□□□ -1.01
VRK3-209ENST00000594948 WFDC10BQ8IUB3 73 aa8.74□□□□□ -1.01
VRK3-209ENST00000594948 KPRPQ5T749 579 aaPredicted RBP8.73□□□□□ -1.01
VRK3-209ENST00000594948 MTORP42345 2549 aa8.73□□□□□ -1.01
VRK3-209ENST00000594948 A0A1B0GW54 56 aa8.73□□□□□ -1.01
VRK3-209ENST00000594948 NREPQ16612 68 aa8.72□□□□□ -1.01
VRK3-209ENST00000594948 RMI2Q96E14 147 aa8.72□□□□□ -1.01
VRK3-209ENST00000594948 KCNQ1DNQ9H478 68 aa8.72□□□□□ -1.01
VRK3-209ENST00000594948 C4orf26Q17RF5 130 aa8.71□□□□□ -1.01
VRK3-209ENST00000594948 TM2D3Q9BRN9 247 aa8.71□□□□□ -1.01
VRK3-209ENST00000594948 F8WEM9 126 aa8.7□□□□□ -1.02
VRK3-209ENST00000594948 SCXQ7RTU7 201 aa8.7□□□□□ -1.02
VRK3-209ENST00000594948 BPY2O14599 106 aa8.7□□□□□ -1.02
VRK3-209ENST00000594948 IGKV4-1P06312 121 aa8.7□□□□□ -1.02
VRK3-209ENST00000594948 C1orf43Q9BWL3 253 aa8.7□□□□□ -1.02
VRK3-209ENST00000594948 SNURFQ9Y675 71 aa8.7□□□□□ -1.02
VRK3-209ENST00000594948 J3QKU1 62 aa8.69□□□□□ -1.02
VRK3-209ENST00000594948 LINC01556Q5JQF7 62 aa8.69□□□□□ -1.02
VRK3-209ENST00000594948 Q6ZRP5 223 aa8.69□□□□□ -1.02
VRK3-209ENST00000594948 PLA2G2DQ9UNK4 145 aa8.69□□□□□ -1.02
VRK3-209ENST00000594948 HIVEP2P31629 2446 aa8.69□□□□□ -1.02
VRK3-209ENST00000594948 NBEAL2Q6ZNJ1 2754 aa8.69□□□□□ -1.02
VRK3-209ENST00000594948 IGLV5-48A0A075B6I7 105 aa8.68□□□□□ -1.02
VRK3-209ENST00000594948 SYCNQ0VAF6 134 aa8.68□□□□□ -1.02
VRK3-209ENST00000594948 HRCT1Q6UXD1 115 aa8.68□□□□□ -1.02
VRK3-209ENST00000594948 SMIM26A0A096LP01 95 aa8.67□□□□□ -1.02
VRK3-209ENST00000594948 TLX1NBP0CAT3 122 aa8.67□□□□□ -1.02
VRK3-209ENST00000594948 NKAPP1Q8N9T2 125 aa8.66□□□□□ -1.02
VRK3-209ENST00000594948 TMEM254Q8TBM7 123 aa8.66□□□□□ -1.02
VRK3-209ENST00000594948 ESRGQ1W209 222 aa8.66□□□□□ -1.02
VRK3-209ENST00000594948 DHRS4-AS1Q9P1J3 65 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms