RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 MAP6D1Q9H9H5 199 aa8.67□□□□□ -1.02
LIG1-207ENST00000594759 NKAPP1Q8N9T2 125 aa8.67□□□□□ -1.02
LIG1-207ENST00000594759 LOC100131303A0A0U1RQF7 123 aa8.66□□□□□ -1.02
LIG1-207ENST00000594759 LYPD5Q6UWN5 251 aa8.66□□□□□ -1.02
LIG1-207ENST00000594759 C16orf74Q96GX8 76 aa8.66□□□□□ -1.02
LIG1-207ENST00000594759 Q8IZM0 81 aa8.65□□□□□ -1.02
LIG1-207ENST00000594759 DMDP11532 3685 aa8.65□□□□□ -1.02
LIG1-207ENST00000594759 IGLV4-60A0A075B6I1 120 aa8.65□□□□□ -1.02
LIG1-207ENST00000594759 TMEM89A2RUT3 159 aa8.65□□□□□ -1.02
LIG1-207ENST00000594759 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.65□□□□□ -1.02
LIG1-207ENST00000594759 PRR15LQ9BU68 103 aa8.65□□□□□ -1.02
LIG1-207ENST00000594759 C1orf158Q8N1D5 194 aa8.65□□□□□ -1.02
LIG1-207ENST00000594759 XAGE1AQ9HD64 81 aa8.65□□□□□ -1.02
LIG1-207ENST00000594759 DNAJC9-AS1A6NH13 148 aa8.65□□□□□ -1.03
LIG1-207ENST00000594759 ASPMQ8IZT6 3477 aa8.64□□□□□ -1.03
LIG1-207ENST00000594759 C18orf65Q6ZTR6 163 aa8.64□□□□□ -1.03
LIG1-207ENST00000594759 SPATA3Q8NHX4 192 aa8.64□□□□□ -1.03
LIG1-207ENST00000594759 C9orf116Q5BN46 136 aaPredicted RBP8.64□□□□□ -1.03
LIG1-207ENST00000594759 Q6YL49 198 aa8.63□□□□□ -1.03
LIG1-207ENST00000594759 CHCHD10Q8WYQ3 142 aaPredicted RBP8.63□□□□□ -1.03
LIG1-207ENST00000594759 TEP1Q99973 2627 aaKnown RBP8.63□□□□□ -1.03
LIG1-207ENST00000594759 COX17Q14061 63 aa8.62□□□□□ -1.03
LIG1-207ENST00000594759 OBSCN-AS1Q96MR7 158 aa8.62□□□□□ -1.03
LIG1-207ENST00000594759 CHD6Q8TD26 2715 aa8.62□□□□□ -1.03
LIG1-207ENST00000594759 IGLV1-40P01703 118 aa8.61□□□□□ -1.03
LIG1-207ENST00000594759 LOC110117498A0A087WWA1 95 aa8.61□□□□□ -1.03
LIG1-207ENST00000594759 IGHV3OR16-9A0A0B4J2B5 98 aa8.61□□□□□ -1.03
LIG1-207ENST00000594759 CAMK2N2Q96S95 79 aa8.61□□□□□ -1.03
LIG1-207ENST00000594759 COL27A1Q8IZC6 1860 aaPredicted RBP8.61□□□□□ -1.03
LIG1-207ENST00000594759 DCHS1Q96JQ0 3298 aa8.6□□□□□ -1.03
LIG1-207ENST00000594759 ZNF73O43830 326 aaPredicted RBP8.6□□□□□ -1.03
LIG1-207ENST00000594759 SMR3AQ99954 134 aa8.6□□□□□ -1.03
LIG1-207ENST00000594759 NDUFS5O43920 106 aa8.59□□□□□ -1.03
LIG1-207ENST00000594759 ERC2-IT1O76042 136 aa8.59□□□□□ -1.03
LIG1-207ENST00000594759 C6orf223Q8N319 242 aa8.59□□□□□ -1.03
LIG1-207ENST00000594759 MGAM2Q2M2H8 2515 aa8.59□□□□□ -1.03
LIG1-207ENST00000594759 REG3AQ06141 175 aa8.58□□□□□ -1.04
LIG1-207ENST00000594759 PRR15Q8IV56 129 aa8.58□□□□□ -1.04
LIG1-207ENST00000594759 A8MUN3 132 aa8.58□□□□□ -1.04
LIG1-207ENST00000594759 ESM1Q9NQ30 184 aa8.58□□□□□ -1.04
LIG1-207ENST00000594759 C22orf24Q9Y442 160 aa8.58□□□□□ -1.04
LIG1-207ENST00000594759 LAMA5O15230 3695 aa8.58□□□□□ -1.04
LIG1-207ENST00000594759 ETDCA0A1B0GVM5 59 aa8.58□□□□□ -1.04
LIG1-207ENST00000594759 CD164L2Q6UWJ8 174 aa8.58□□□□□ -1.04
LIG1-207ENST00000594759 ZNF702PQ9H963 129 aa8.57□□□□□ -1.04
LIG1-207ENST00000594759 MAST4O15021 2626 aa8.57□□□□□ -1.04
LIG1-207ENST00000594759 WFDC13Q8IUB5 93 aa8.56□□□□□ -1.04
LIG1-207ENST00000594759 LINC00208Q96KT6 92 aa8.56□□□□□ -1.04
LIG1-207ENST00000594759 DEFB4AO15263 64 aa8.56□□□□□ -1.04
LIG1-207ENST00000594759 SMIM29Q86T20 159 aa8.56□□□□□ -1.04
LIG1-207ENST00000594759 WFDC10BQ8IUB3 73 aa8.56□□□□□ -1.04
LIG1-207ENST00000594759 INAFM1C9JVW0 142 aa8.55□□□□□ -1.04
LIG1-207ENST00000594759 UNQ6190/PRO20217Q6UXQ8 127 aa8.55□□□□□ -1.04
LIG1-207ENST00000594759 LINC01006Q8NI28 216 aa8.55□□□□□ -1.04
LIG1-207ENST00000594759 C4orf3Q8WVX3 66 aa8.55□□□□□ -1.04
LIG1-207ENST00000594759 KLK12Q9UKR0 248 aa8.55□□□□□ -1.04
LIG1-207ENST00000594759 DEFB114Q30KQ6 69 aa8.54□□□□□ -1.04
LIG1-207ENST00000594759 LIMD2Q9BT23 127 aa8.54□□□□□ -1.04
LIG1-207ENST00000594759 C1orf64Q8NEQ6 169 aa8.54□□□□□ -1.04
LIG1-207ENST00000594759 KLK9Q2XQG4 91 aa8.53□□□□□ -1.04
LIG1-207ENST00000594759 FAM104AQ969W3 186 aa8.53□□□□□ -1.04
LIG1-207ENST00000594759 PRO0255Q9UI72 69 aa8.53□□□□□ -1.04
LIG1-207ENST00000594759 FAM229BQ4G0N7 80 aa8.53□□□□□ -1.04
LIG1-207ENST00000594759 ITPR1Q14643 2758 aa8.53□□□□□ -1.04
LIG1-207ENST00000594759 TRAV22A0A0B4J277 110 aa8.52□□□□□ -1.04
LIG1-207ENST00000594759 TRBV7-4A0A0J9YYF1 115 aa8.52□□□□□ -1.04
LIG1-207ENST00000594759 WFDC10AQ9H1F0 79 aa8.52□□□□□ -1.04
LIG1-207ENST00000594759 LY6G6DO95868 133 aa8.52□□□□□ -1.05
LIG1-207ENST00000594759 HCG22E2RYF7 251 aa8.52□□□□□ -1.05
LIG1-207ENST00000594759 B9D2Q9BPU9 175 aa8.52□□□□□ -1.05
LIG1-207ENST00000594759 CYSRT1A8MQ03 144 aa8.51□□□□□ -1.05
LIG1-207ENST00000594759 PLA2G2AP14555 144 aa8.5□□□□□ -1.05
LIG1-207ENST00000594759 M0R2N4 97 aa8.5□□□□□ -1.05
LIG1-207ENST00000594759 C16orf95Q9H693 158 aa8.5□□□□□ -1.05
LIG1-207ENST00000594759 TEX15Q9BXT5 2789 aa8.5□□□□□ -1.05
LIG1-207ENST00000594759 KTN1-AS1Q86SY8 53 aa8.49□□□□□ -1.05
LIG1-207ENST00000594759 DEFB135Q30KP9 77 aa8.49□□□□□ -1.05
LIG1-207ENST00000594759 A0A0J9YWU9 116 aa8.48□□□□□ -1.05
LIG1-207ENST00000594759 GCN1Q92616 2671 aaKnown RBP8.48□□□□□ -1.05
LIG1-207ENST00000594759 M0R378 163 aa8.48□□□□□ -1.05
LIG1-207ENST00000594759 RELNP78509 3460 aa8.47□□□□□ -1.05
LIG1-207ENST00000594759 hDV103S1A0JD37 113 aa8.47□□□□□ -1.05
LIG1-207ENST00000594759 LINC00167Q96N53 147 aa8.46□□□□□ -1.06
LIG1-207ENST00000594759 ODF3L2Q3SX64 289 aa8.46□□□□□ -1.06
LIG1-207ENST00000594759 C1orf137Q5JT78 98 aa8.45□□□□□ -1.06
LIG1-207ENST00000594759 CDK2AP2O75956 126 aa8.45□□□□□ -1.06
LIG1-207ENST00000594759 C10orf25Q5T742 122 aa8.44□□□□□ -1.06
LIG1-207ENST00000594759 DEFB116Q30KQ4 102 aa8.44□□□□□ -1.06
LIG1-207ENST00000594759 C9orf66Q5T8R8 295 aa8.44□□□□□ -1.06
LIG1-207ENST00000594759 Q6ZRU5 148 aa8.44□□□□□ -1.06
LIG1-207ENST00000594759 ZANQ9Y493 2812 aa8.44□□□□□ -1.06
LIG1-207ENST00000594759 APOC4P55056 127 aa8.44□□□□□ -1.06
LIG1-207ENST00000594759 Q1T7F1 81 aa8.44□□□□□ -1.06
LIG1-207ENST00000594759 UNC79Q9P2D8 2635 aa8.43□□□□□ -1.06
LIG1-207ENST00000594759 RBM12B-AS1Q9P1G2 102 aa8.43□□□□□ -1.06
LIG1-207ENST00000594759 ASH1LQ9NR48 2969 aaKnown RBP8.42□□□□□ -1.06
LIG1-207ENST00000594759 IGKV2D-24A0A075B6R9 120 aa8.42□□□□□ -1.06
LIG1-207ENST00000594759 H0Y9J4 135 aa8.42□□□□□ -1.06
LIG1-207ENST00000594759 KPRPQ5T749 579 aaPredicted RBP8.42□□□□□ -1.06
LIG1-207ENST00000594759 CRYBG3Q68DQ2 2970 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms