RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 MIEN1Q9BRT3 115 aa6.91□□□□□ -1.3
USE1-204ENST00000594399 PRO1933Q9H354 126 aa6.91□□□□□ -1.3
USE1-204ENST00000594399 SPANXB1Q9NS25 103 aaPredicted RBP6.91□□□□□ -1.3
USE1-204ENST00000594399 TSTD3H0UI37 97 aa6.9□□□□□ -1.3
USE1-204ENST00000594399 PANO1I0J062 215 aa6.9□□□□□ -1.3
USE1-204ENST00000594399 NPC2P61916 151 aa6.9□□□□□ -1.3
USE1-204ENST00000594399 COPS9Q8WXC6 57 aa6.9□□□□□ -1.3
USE1-204ENST00000594399 HIGD1BQ9P298 99 aa6.9□□□□□ -1.3
USE1-204ENST00000594399 HNRNPA3P51991 378 aaKnown RBP6.89□□□□□ -1.31
USE1-204ENST00000594399 SRSF9Q13242 221 aaKnown RBP eCLIP6.89□□□□□ -1.31
USE1-204ENST00000594399 LINC00308Q8TCZ7 52 aa6.89□□□□□ -1.31
USE1-204ENST00000594399 KRTAP17-1Q9BYP8 105 aa6.89□□□□□ -1.31
USE1-204ENST00000594399 FAM30AQ9NZY2 134 aa6.89□□□□□ -1.31
USE1-204ENST00000594399 IFITM1P13164 125 aa6.88□□□□□ -1.31
USE1-204ENST00000594399 SOSTDC1Q6X4U4 206 aa6.88□□□□□ -1.31
USE1-204ENST00000594399 FAM19A5Q7Z5A7 132 aaPredicted RBP6.88□□□□□ -1.31
USE1-204ENST00000594399 DPH3Q96FX2 82 aa6.88□□□□□ -1.31
USE1-204ENST00000594399 HIST1H4GQ99525 98 aa6.88□□□□□ -1.31
USE1-204ENST00000594399 PPDPFQ9H3Y8 114 aa6.88□□□□□ -1.31
USE1-204ENST00000594399 A0A087WYN8 130 aa6.87□□□□□ -1.31
USE1-204ENST00000594399 LOC107984156A0A0G2JMH3 177 aa6.87□□□□□ -1.31
USE1-204ENST00000594399 FAM168BA1KXE4 195 aa6.87□□□□□ -1.31
USE1-204ENST00000594399 CDK2AP2O75956 126 aa6.87□□□□□ -1.31
USE1-204ENST00000594399 SERTAD4-AS1Q5TG53 156 aa6.87□□□□□ -1.31
USE1-204ENST00000594399 ARL17AQ8IVW1 177 aa6.87□□□□□ -1.31
USE1-204ENST00000594399 PLAC8Q9NZF1 115 aa6.87□□□□□ -1.31
USE1-204ENST00000594399 PLA2G2DQ9UNK4 145 aa6.87□□□□□ -1.31
USE1-204ENST00000594399 RYR1P21817 5038 aa6.87□□□□□ -1.31
USE1-204ENST00000594399 EIF4EBP3O60516 100 aaPredicted RBP6.86□□□□□ -1.31
USE1-204ENST00000594399 VPREB1P12018 145 aa6.86□□□□□ -1.31
USE1-204ENST00000594399 RPL24P83731 157 aaKnown RBP6.86□□□□□ -1.31
USE1-204ENST00000594399 SCXQ7RTU7 201 aa6.86□□□□□ -1.31
USE1-204ENST00000594399 NKAPP1Q8N9T2 125 aa6.86□□□□□ -1.31
USE1-204ENST00000594399 PCLOQ9Y6V0 5065 aa6.85□□□□□ -1.31
USE1-204ENST00000594399 IGLV5-37A0A075B6J1 123 aa6.85□□□□□ -1.31
USE1-204ENST00000594399 A0A1W2PNN7 141 aa6.85□□□□□ -1.31
USE1-204ENST00000594399 M0QXV9 152 aa6.85□□□□□ -1.31
USE1-204ENST00000594399 NDUFC2O95298 119 aa6.85□□□□□ -1.31
USE1-204ENST00000594399 HSD52Q0P140 79 aa6.85□□□□□ -1.31
USE1-204ENST00000594399 TAL2Q16559 108 aa6.85□□□□□ -1.31
USE1-204ENST00000594399 MUSTN1Q8IVN3 82 aa6.85□□□□□ -1.31
USE1-204ENST00000594399 Q8NDZ9 215 aa6.85□□□□□ -1.31
USE1-204ENST00000594399 APOBP04114 4563 aaKnown RBP6.85□□□□□ -1.31
USE1-204ENST00000594399 EPM2AB3EWF7 344 aa6.84□□□□□ -1.31
USE1-204ENST00000594399 HAMPP81172 84 aa6.84□□□□□ -1.31
USE1-204ENST00000594399 KRTAP7-1Q8IUC3 87 aa6.84□□□□□ -1.31
USE1-204ENST00000594399 CIRBP-AS1Q8TBR5 109 aa6.84□□□□□ -1.31
USE1-204ENST00000594399 NCR3O14931 201 aa6.83□□□□□ -1.32
USE1-204ENST00000594399 C22orf24Q9Y442 160 aa6.83□□□□□ -1.32
USE1-204ENST00000594399 MRPL55Q7Z7F7 128 aaKnown RBP6.82□□□□□ -1.32
USE1-204ENST00000594399 CEND1Q8N111 149 aa6.82□□□□□ -1.32
USE1-204ENST00000594399 TRBV10-2A0A0K0K1G8 114 aa6.81□□□□□ -1.32
USE1-204ENST00000594399 A4D1N5 150 aa6.81□□□□□ -1.32
USE1-204ENST00000594399 M0R378 163 aa6.81□□□□□ -1.32
USE1-204ENST00000594399 DDTP30046 118 aa6.81□□□□□ -1.32
USE1-204ENST00000594399 XGP55808 180 aa6.81□□□□□ -1.32
USE1-204ENST00000594399 PRR3P79522 188 aaKnown RBP6.81□□□□□ -1.32
USE1-204ENST00000594399 LBHQ53QV2 105 aaPredicted RBP6.81□□□□□ -1.32
USE1-204ENST00000594399 PHF5AQ7RTV0 110 aaKnown RBP6.81□□□□□ -1.32
USE1-204ENST00000594399 IGKV2-28A0A075B6P5 120 aa6.8□□□□□ -1.32
USE1-204ENST00000594399 TMEM238LA0A1B0GVL6 79 aa6.8□□□□□ -1.32
USE1-204ENST00000594399 GAGE10A6NGK3 116 aa6.8□□□□□ -1.32
USE1-204ENST00000594399 A6NJY4 79 aa6.8□□□□□ -1.32
USE1-204ENST00000594399 IGKV2D-28P01615 120 aa6.8□□□□□ -1.32
USE1-204ENST00000594399 UBE2BP63146 152 aa6.8□□□□□ -1.32
USE1-204ENST00000594399 CTAG1AP78358 180 aa6.8□□□□□ -1.32
USE1-204ENST00000594399 C7orf33Q8WU49 177 aa6.8□□□□□ -1.32
USE1-204ENST00000594399 FXYD2P54710 66 aa6.79□□□□□ -1.32
USE1-204ENST00000594399 LINC00167Q96N53 147 aa6.79□□□□□ -1.32
USE1-204ENST00000594399 S100A7L2Q5SY68 101 aa6.78□□□□□ -1.32
USE1-204ENST00000594399 Q8N1X5 172 aa6.78□□□□□ -1.32
USE1-204ENST00000594399 LINC00337Q8N6G1 96 aa6.78□□□□□ -1.32
USE1-204ENST00000594399 ABCA13Q86UQ4 5058 aa6.77□□□□□ -1.33
USE1-204ENST00000594399 TRAV13-2A0A0B4J235 113 aa6.77□□□□□ -1.33
USE1-204ENST00000594399 TRBV10-3A0A0K0K1G6 114 aa6.77□□□□□ -1.33
USE1-204ENST00000594399 RPL37AP8A6NKH3 93 aa6.77□□□□□ -1.33
USE1-204ENST00000594399 M0R143 59 aa6.77□□□□□ -1.33
USE1-204ENST00000594399 HSPG2P98160 4391 aa6.77□□□□□ -1.33
USE1-204ENST00000594399 IGLV1-50A0A075B6I6 118 aa6.76□□□□□ -1.33
USE1-204ENST00000594399 A0A0B4J2C4 111 aa6.76□□□□□ -1.33
USE1-204ENST00000594399 IGLV6-57P01721 117 aa6.76□□□□□ -1.33
USE1-204ENST00000594399 HINT1P49773 126 aaPredicted RBP6.76□□□□□ -1.33
USE1-204ENST00000594399 BVES-AS1Q5T3Y7 98 aa6.76□□□□□ -1.33
USE1-204ENST00000594399 OR13C6PQ8NH95 151 aa6.76□□□□□ -1.33
USE1-204ENST00000594399 RAB37Q96AX2 223 aa6.76□□□□□ -1.33
USE1-204ENST00000594399 TMEM126AQ9H061 195 aa6.76□□□□□ -1.33
USE1-204ENST00000594399 A6NDN8 102 aa6.75□□□□□ -1.33
USE1-204ENST00000594399 CFC1BP0CG36 223 aa6.75□□□□□ -1.33
USE1-204ENST00000594399 CFC1P0CG37 223 aa6.75□□□□□ -1.33
USE1-204ENST00000594399 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
USE1-204ENST00000594399 CBY1Q9Y3M2 126 aa6.75□□□□□ -1.33
USE1-204ENST00000594399 TRAV23DV6A0A075B6W5 121 aa6.74□□□□□ -1.33
USE1-204ENST00000594399 PRYO14603 147 aa6.74□□□□□ -1.33
USE1-204ENST00000594399 RPL13AP40429 203 aaKnown RBP6.74□□□□□ -1.33
USE1-204ENST00000594399 KRTAP11-1Q8IUC1 163 aa6.74□□□□□ -1.33
USE1-204ENST00000594399 LINC00528Q8N1L1 170 aa6.74□□□□□ -1.33
USE1-204ENST00000594399 NHP2Q9NX24 153 aaKnown RBP6.74□□□□□ -1.33
USE1-204ENST00000594399 PCP4L1A6NKN8 68 aa6.73□□□□□ -1.33
USE1-204ENST00000594399 KCNQ1DNQ9H478 68 aa6.73□□□□□ -1.33
USE1-204ENST00000594399 A0A1B0GWB2 263 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms